Fig. 5: Cell type recovery performance across technology.
From: Systematic benchmarking of imaging spatial transcriptomics platforms in FFPE tissues
a Clustering results of breast cancer samples in tTMA1 (23) from Xenium breast panel, MERSCOPE breast panel, and CosMx multi-tissue panel. Correlation plot showing the correlation between cell types identified in CosMx and Xenium as well as MERSCOPE and Xenium. b Clustering results of breast cancer samples in tTMA1 (24) from Xenium breast panel, MERSCOPE breast panel, and CosMx multi-tissue panel. Correlation plot showing the correlation between cell types identified in CosMx and Xenium as well as MERSCOPE and Xenium. c Heatmaps show high cell type annotation correlation between experiments conducted for Tumor TMA 1 of Xenium (top), MERSCOPE (middle), CosMx (bottom). d Clustering results of breast cancer samples in tTMA2 (24) from Xenium breast panel and CosMx multi-tissue panel. Correlation plot showing the correlation between cell types identified in CosMx and Xenium.
