Table 5 Subcellular localization comparison

From: Ab-initio amino acid sequence design from protein text description with ProtDAT

Method

Condition

Accuracy

Micro Precision

Micro Recall

F1 Score

ProtDAT(PM2)

Top-1

0.598

0.598

0.598

0.598

ProtDAT(PM2) (without MCM)

Top-1

0.371

0.371

0.371

0.371

ProtDAT(PM2)

Top-3

0.360

0.512

0.558

0.534

ProtDAT(PM2) (without MCM)

Top-3

0.214

0.311

0.336

0.323

  1. The subcellular localization information of generated sequences is classified by DeepLoc2.1 under Top-1 and Top-3 conditions. The related evaluation metrics can be found in Fig. 2e–h.