Fig. 5: Cell level predictions with sCellST.
From: sCellST predicts single-cell gene expression from H& E images
Each subpanel corresponds to a Visium slide from cancer tissue: (a) breast and (b) ovarian. For all slides, the first row displays the H&E image, followed by Visium measurements in spots for three genes highlighting the presence of different cell types. The second row shows cell types predicted by CellViT, followed by sCellST gene predictions for the same genes. The minimum value in the color bar corresponds to the 0.05 quantile of each subpanel’s values, and the maximum value corresponds to the 0.95 quantile.
