Skip to main content

Thank you for visiting nature.com. You are using a browser version with limited support for CSS. To obtain the best experience, we recommend you use a more up to date browser (or turn off compatibility mode in Internet Explorer). In the meantime, to ensure continued support, we are displaying the site without styles and JavaScript.

Advertisement

Nature Communications
  • View all journals
  • Search
  • My Account Login
  • Content Explore content
  • About the journal
  • Publish with us
  • Sign up for alerts
  • RSS feed
  1. nature
  2. nature communications
  3. articles
  4. article
Intradermal delivery of lipophilic siRNAs enables prolonged skin retention and sustained gene silencing in a porcine model
Download PDF
Download PDF
  • Article
  • Open access
  • Published: 03 February 2026

Intradermal delivery of lipophilic siRNAs enables prolonged skin retention and sustained gene silencing in a porcine model

  • Hassan H. Fakih  ORCID: orcid.org/0000-0002-7598-09931 na1,
  • Mohammad Zain UI Abideen1 na1,
  • Mohamad Omar Rachid1 na1,
  • Katherine Y. Gross  ORCID: orcid.org/0000-0002-3468-03451,
  • Thomas J. R. Ormsby  ORCID: orcid.org/0000-0003-4371-53161,
  • Vella M. Ross1,
  • Rosemary Gagnon1,
  • Christopher Dahlke1,
  • Raymond C. Furgal  ORCID: orcid.org/0000-0002-4757-73391,
  • Clemens Lochmann  ORCID: orcid.org/0009-0005-3869-82421,
  • Ashley Summers  ORCID: orcid.org/0000-0002-5425-04571,
  • Hanadi F. Sleiman  ORCID: orcid.org/0000-0002-5100-05322,
  • Sylvia M. Fürst3,
  • Shanté N. Jackson4,
  • Juliana O. Gordilho5,
  • Claire Bouix-Peter5,
  • Thibaud Portal5,
  • Qi Tang  ORCID: orcid.org/0000-0002-8913-05191,6,
  • John E. Harris  ORCID: orcid.org/0000-0002-7815-64305,6,7,
  • Anastasia Khvorova  ORCID: orcid.org/0000-0001-6928-80711,
  • Carine Blanchard  ORCID: orcid.org/0000-0002-3377-290X5 &
  • …
  • Julia F. Alterman  ORCID: orcid.org/0000-0002-6195-08571 

Nature Communications , Article number:  (2026) Cite this article

We are providing an unedited version of this manuscript to give early access to its findings. Before final publication, the manuscript will undergo further editing. Please note there may be errors present which affect the content, and all legal disclaimers apply.

Subjects

  • Drug delivery
  • Molecular medicine
  • RNAi therapy
  • Skin diseases

Abstract

Small interfering RNAs (siRNAs) offer significant therapeutic potential; however, extrahepatic applications, particularly to the skin, remain a challenge. Limited work has explored siRNA therapies for the skin, the largest organ in the human body, where dermatological conditions affect over one-third of the population worldwide. The skin’s external location makes it easily accessible for direct, local administration. Here, we present the in vivo intradermal delivery of therapeutic siRNAs into a porcine model whose skin structure most closely resembles that of human skin, demonstrating functional, and sustained gene silencing. We characterize two siRNA conjugates in human ex vivo and porcine in vivo skin models, showing that increased hydrophobicity significantly enhances skin retention and efficacy of siRNAs. Using a validated JAK1-targeting compound, we demonstrate that local delivery of siRNA enables accumulation across multiple cell types and suppression of JAK1-dependent inflammatory pathway in human skin ex vivo. In porcine models, intradermal injections result in prolonged skin siRNA retention for more than eight weeks, limited systemic tissue exposure, and sustained gene silencing for at least one month. These results underscore the importance of tailored siRNA conjugate design for achieving optimal skin biodistribution and therapeutic efficacy, providing a foundation for siRNA-based treatments for a broad range of dermatological conditions.

Data availability

All data generated in this study are provided in the Supplementary Information and Source Data file. A Source Data file is provided with this paper. Source data are provided with this paper.

References

  1. Belgrad, J., Fakih, H. H. & Khvorova, A. Nucleic acid therapeutics: successes, milestones, and upcoming innovation. Nucleic Acid Ther. 34, 52–72 (2024).

    Google Scholar 

  2. Setten, R. L., Rossi, J. J. & Han, S.-P. The current state and future directions of RNAi-based therapeutics. Nat. Rev. Drug Discov. 18, 421–446 (2019).

    Google Scholar 

  3. Tang, Q. & Khvorova, A. RNAi-based drug design: considerations and future directions. Nat. Rev. Drug Discov. 23, 341–364 (2024).

    Google Scholar 

  4. Friedrich, M. & Aigner, A. Therapeutic siRNA: state-of-the-art and future perspectives. BioDrugs 36, 549–571 (2022).

    Google Scholar 

  5. Biscans, A. et al. Docosanoic acid conjugation to siRNA enables functional and safe delivery to skeletal and cardiac muscles. Mol. Ther. 29, 1382–1394 (2021).

    Google Scholar 

  6. Hariharan, V. N. et al. Divalent siRNAs are bioavailable in the lung and efficiently block SARS-CoV-2 infection. Proc. Natl. Acad. Sci. USA 120, e2219523120 (2023).

    Google Scholar 

  7. Brown, K. M. et al. Expanding RNAi therapeutics to extrahepatic tissues with lipophilic conjugates. Nat. Biotechnol. 40, 1500–1508 (2022).

    Google Scholar 

  8. Paunovska, K., Loughrey, D. & Dahlman, J. E. Drug delivery systems for RNA therapeutics. Nat. Rev. Genet. 23, 265–280 (2022).

    Google Scholar 

  9. Ain, Q. U., Campos, E. V. R., Huynh, A., Witzigmann, D. & Hedtrich, S. Gene delivery to the skin – how far have we come? Trends Biotechnol. 39, 474–487 (2021).

    Google Scholar 

  10. Bilousova, G. Gene therapy for skin fragility diseases: the new generation. J. Invest. Dermatol. 139, 1634–1637 (2019).

    Google Scholar 

  11. Hay, R. J. et al. The global burden of skin disease in 2010: an analysis of the prevalence and impact of skin conditions. J. Invest Dermatol 134, 1527–1534 (2014).

    Google Scholar 

  12. Moloo, A. Recognizing neglected skin diseases: WHO publishes pictorial training guide, https://www.who.int/news/item/08-06-2018-recognizing-neglected-skin-diseases-who-publishes-pictorial-training-guide (2018).

  13. Sufianov, A. et al. Advances in transdermal siRNAs delivery: a review of current research progress. Non-coding RNA Res. 8, 392–400 (2023).

    Google Scholar 

  14. Schwartz, D. M. et al. JAK inhibition as a therapeutic strategy for immune and inflammatory diseases. Nat. Rev. Drug Discov. 16, 843–862 (2017).

    Google Scholar 

  15. Pasparakis, M., Haase, I. & Nestle, F. O. Mechanisms regulating skin immunity and inflammation. Nat. Rev. Immunol. 14, 289–301 (2014).

    Google Scholar 

  16. Kabashima, K., Honda, T., Ginhoux, F. & Egawa, G. The immunological anatomy of the skin. Nat. Rev. Immunol. 19, 19–30 (2019).

    Google Scholar 

  17. Godin, B. & Touitou, E. Transdermal skin delivery: predictions for humans from in vivo, ex vivo and animal models. Adv. drug Deliv. Rev. 59, 1152–1161 (2007).

    Google Scholar 

  18. Biscans, A. et al. Diverse lipid conjugates for functional extra-hepatic siRNA delivery in vivo. Nucleic Acids Res. 47, 1082–1096 (2018).

    Google Scholar 

  19. Fakih, H. H. et al. Dendritic amphiphilic siRNA: Selective albumin binding, in vivo efficacy, and low toxicity. Molecular Therapy - Nucleic Acids 34. https://doi.org/10.1016/j.omtn.2023.102080 (2023).

  20. Tang, Q. et al. RNAi-based modulation of IFN-γ signaling in skin. Mol. Ther. 30, 2709–2721 (2022).

    Google Scholar 

  21. Tang, Q. et al. Rational design of a JAK1-selective siRNA inhibitor for the modulation of autoimmunity in the skin. Nat. Commun. 14, 7099 (2023).

    Google Scholar 

  22. Tang, Q. et al. Multispecies-targeting siRNAs for the modulation of JAK1 in the skin. Mol. Ther. Nucleic Acids 35, 102117 (2024).

    Google Scholar 

  23. Zomer, H. D. & Trentin, A. G. Skin wound healing in humans and mice: Challenges in translational research. J. Dermatol. Sci. 90, 3–12 (2018).

    Google Scholar 

  24. Balato, A. et al. Human microbiome: composition and role in inflammatory skin diseases. Arch. Immunol. Ther. Exp. 67, 1–18 (2019).

    Google Scholar 

  25. Pazdur, R. Incyte comes of age with JAK inhibitor approval. Nat. Biotechnol. 30, 3 (2012).

    Google Scholar 

  26. Fania, L. et al. Multiple roles for cytokines in atopic dermatitis: from pathogenic mediators to endotype-specific biomarkers to therapeutic targets. Int. J. Mol. Sci. 23, 2684 (2022).

    Google Scholar 

  27. Triyangkulsri, K. & Suchonwanit, P. Role ofJanus kinase inhibitors in the treatment of alopecia areata. Drug Design 12, 2323–2335 (2018).

    Google Scholar 

  28. Bergqvist, C. & Ezzedine, K. Vitiligo: a focus on pathogenesis and its therapeutic implications. J. Dermatol. 48, 252–270 (2021).

    Google Scholar 

  29. Tokareva, K. et al. JAK inhibitors and black box warnings: what is the future for JAK inhibitors? Expert Rev. Clin. Immunol. 19, 1385–1397 (2023).

    Google Scholar 

  30. Summerfield, A., Meurens, F. & Ricklin, M. E. The immunology of the porcine skin and its value as a model for human skin. Mol. Immunol. 66, 14–21 (2015).

    Google Scholar 

  31. Godinho, B. et al. Pharmacokinetic profiling of conjugated therapeutic oligonucleotides: a high-throughput method based upon serial blood microsampling coupled to peptide nucleic acid hybridization assay. Nucleic Acid Ther. 27, 323–334 (2017).

    Google Scholar 

  32. Cross, S. E., Magnusson, B. M., Winckle, G., Anissimov, Y. & Roberts, M. S. Determination of the effect of lipophilicity on the in vitro permeability and tissue reservoir characteristics of topically applied solutes in human skin layers. J. Invest Dermatol 120, 759–764 (2003).

    Google Scholar 

  33. Alterman, J. F. et al. A divalent siRNA chemical scaffold for potent and sustained modulation of gene expression throughout the central nervous system. Nat. Biotechnol. 37, 884–894 (2019).

    Google Scholar 

  34. Zakrewsky, M., Kumar, S. & Mitragotri, S. Nucleic acid delivery into skin for the treatment of skin disease: proofs-of-concept, potential impact, and remaining challenges. J. Control. Release 219, 445–456 (2015).

    Google Scholar 

  35. Rodgers, A. M. et al. Design and characterisation of a dissolving microneedle patch for intradermal vaccination with heat-inactivated bacteria: a proof of concept study. Int J. Pharm. 549, 87–95 (2018).

    Google Scholar 

  36. Deng, Y. et al. Transdermal delivery of siRNA through microneedle array. Sci. Rep. 6, 21422 (2016).

    Google Scholar 

  37. Dharamdasani, V. et al. Topical delivery of siRNA into skin using ionic liquids. J. Control. Release 323, 475–482 (2020).

    Google Scholar 

  38. Tadros, A. R. et al. STAR particles for enhanced topical drug and vaccine delivery. Nat. Med. 26, 341–347 (2020).

    Google Scholar 

  39. National Library of Medicine (US). A Phase 1B/2A, Randomized, Double-blind, Placebo-controlled, Intraindividual Study to Evaluate the Safety, Tolerability, Pharmacokinetics and Preliminary Efficacy of ALD-102 Solution in Subjects With Alopecia Areata. https://clinicaltrials.gov/study/NCT06826196 (2025).

  40. Osborn, M. F. et al. Hydrophobicity drives the systemic distribution of lipid-conjugated siRNAs via lipid transport pathways. Nucleic Acids Res. 47, 1070–1081 (2018).

    Google Scholar 

  41. Lacroix, A., Fakih, H. H. & Sleiman, H. F. Detailed cellular assessment of albumin-bound oligonucleotides: increased stability and lower non-specific cell uptake. J. Control. Release 324, 34–46 (2020).

    Google Scholar 

  42. Lacroix, A., Edwardson, T. G. W., Hancock, M. A., Dore, M. D. & Sleiman, H. F. Development of DNA nanostructures for high-affinity binding to human serum albumin. J. Am. Chem. Soc. 139, 7355–7362 (2017).

    Google Scholar 

  43. Biscans, A. et al. The chemical structure and phosphorothioate content of hydrophobically modified siRNAs impact extrahepatic distribution and efficacy. Nucleic Acids Res. 48, 7665–7680 (2020).

    Google Scholar 

Download references

Acknowledgments

This project was supported by the National Institutes of Health (grant R35 GM131839, S10 OD020012, and S10 OD036329 to A.K.; and Alys Pharmaceuticals/ Aldena Therapeutics (support to J.F.A).

Author information

Author notes
  1. These authors contributed equally: Hassan H. Fakih, Mohammad Zain UI Abideen, Mohamad Omar Rachid.

Authors and Affiliations

  1. RNA Therapeutics Institute, University of Massachusetts Chan Medical School, Worcester, MA, USA

    Hassan H. Fakih, Mohammad Zain UI Abideen, Mohamad Omar Rachid, Katherine Y. Gross, Thomas J. R. Ormsby, Vella M. Ross, Rosemary Gagnon, Christopher Dahlke, Raymond C. Furgal, Clemens Lochmann, Ashley Summers, Qi Tang, Anastasia Khvorova & Julia F. Alterman

  2. Chemistry Department, McGill University, Montreal, QC, Canada

    Hanadi F. Sleiman

  3. Certara USA Inc., Radnor, PA, USA

    Sylvia M. Fürst

  4. Altasciences Preclinical Columbia, Auxvasse, MO, USA

    Shanté N. Jackson

  5. Alys Pharmaceuticals, Aldena Therapeutics, 100 Northern Avenue, Boston, MA, USA

    Juliana O. Gordilho, Claire Bouix-Peter, Thibaud Portal, John E. Harris & Carine Blanchard

  6. Department of Dermatology, University of Massachusetts Chan Medical School, Worcester, MA, USA

    Qi Tang & John E. Harris

  7. Department of Dermatology, Mass General Brigham, Boston, MA, USA

    John E. Harris

Authors
  1. Hassan H. Fakih
    View author publications

    Search author on:PubMed Google Scholar

  2. Mohammad Zain UI Abideen
    View author publications

    Search author on:PubMed Google Scholar

  3. Mohamad Omar Rachid
    View author publications

    Search author on:PubMed Google Scholar

  4. Katherine Y. Gross
    View author publications

    Search author on:PubMed Google Scholar

  5. Thomas J. R. Ormsby
    View author publications

    Search author on:PubMed Google Scholar

  6. Vella M. Ross
    View author publications

    Search author on:PubMed Google Scholar

  7. Rosemary Gagnon
    View author publications

    Search author on:PubMed Google Scholar

  8. Christopher Dahlke
    View author publications

    Search author on:PubMed Google Scholar

  9. Raymond C. Furgal
    View author publications

    Search author on:PubMed Google Scholar

  10. Clemens Lochmann
    View author publications

    Search author on:PubMed Google Scholar

  11. Ashley Summers
    View author publications

    Search author on:PubMed Google Scholar

  12. Hanadi F. Sleiman
    View author publications

    Search author on:PubMed Google Scholar

  13. Sylvia M. Fürst
    View author publications

    Search author on:PubMed Google Scholar

  14. Shanté N. Jackson
    View author publications

    Search author on:PubMed Google Scholar

  15. Juliana O. Gordilho
    View author publications

    Search author on:PubMed Google Scholar

  16. Claire Bouix-Peter
    View author publications

    Search author on:PubMed Google Scholar

  17. Thibaud Portal
    View author publications

    Search author on:PubMed Google Scholar

  18. Qi Tang
    View author publications

    Search author on:PubMed Google Scholar

  19. John E. Harris
    View author publications

    Search author on:PubMed Google Scholar

  20. Anastasia Khvorova
    View author publications

    Search author on:PubMed Google Scholar

  21. Carine Blanchard
    View author publications

    Search author on:PubMed Google Scholar

  22. Julia F. Alterman
    View author publications

    Search author on:PubMed Google Scholar

Contributions

H.H.F., M.Z.U., Q.T., J.F.A., J.E.H., A.K., C.B., C.B.P., and T.P. conceived the project. H.H.F., M.Z.U., Q.T., J.F.A., A.K., S.F., S.J., C.B., C.B.P., and J.O.G. contributed to the experimental design. S.J. was the sole point of contact responsible for overseeing the conduct of studies at Altasciences. H.H.F., M.Z.U., and Q.T. contributed experimentally to human ex vivo studies, including flow cytometry and gene silencing. H.H.F., Q.T., M.Z.U., M.O.R., and K.Y.G. contributed experimentally to ex vivo human skin stimulation and downstream signaling. M.Z.U., V.R., K.Y.G., and R.G. contributed experimentally to siRNA accumulation in porcine organs. M.O.R. and T.J.R.O. contributed experimentally to porcine silencing, stimulation and downstream signaling. M.Z.U., Q.T., H.H.F., M.O.R., T.J.R.O., C.D., R.C.F., C.L., and A.S. helped with overall skin processing and experimental setup. H.H.F. synthesized all siRNA compounds used in the manuscript, with H.H.F. and H.F.S. contributing to the design of the dendritic siRNA conjugation. H.H.F., Q.T., M.Z.U., C.B., J.F.A., and A.K. wrote the manuscript. All authors provided feedback and approved the manuscript.

Corresponding authors

Correspondence to Carine Blanchard or Julia F. Alterman.

Ethics declarations

Competing interests

The authors declare the following competing financial interest(s): The University of Massachusetts Chan Medical School holds patent or filed patent applications for the modulation of JAK1 with RNAi-based technologies (patent application number 18393044; Oligonucleotides for IFN-γ signaling pathway modulation; status pending), docosanoic acid conjugate (patent application number 17377632; Conjugated oligonucleotides for tissue-specific delivery) and dendritic conjugate for skin delivery (Patent application number 18592943; status pending). A.K. serves on the scientific advisory board of Alys Pharmaceuticals. J.E.H. owns equities in Rheos Medicines; is a founder of Alys Pharmaceuticals and Villaris Therapeutics. Select authors of this publication are listed as inventors on RNAi technology patents (HHF, M.Z.U., Q.T., J.F.A., J.E.H., A.K., M.Z.U., R.F., and K.G.) that have been licensed to biotech and pharmaceutical companies. The following patents are licensed by Aldena Therapeutics Ltd.: patent application number 18393044 (Oligonucleotides for IFN-γ signaling pathway modulation) and patent application number 17377632 (Conjugated oligonucleotides for tissue-specific delivery). C.B.P., C.B., J.O.G., and T.P. are executive employees of Alys Pharmaceuticals. SF is employed by Certara. SJ is employed by Altasciences. The remaining authors declare no competing interests.

Peer review

Peer review information

Nature Communications thanks Amogh Vaidya and the other anonymous reviewer(s) for their contribution to the peer review of this work. A peer review file is available.

Additional information

Publisher’s note Springer Nature remains neutral with regard to jurisdictional claims in published maps and institutional affiliations.

Supplementary information

Supplementary Information

Reporting Summary

Transparent Peer Review file

Source data

Source Data

Rights and permissions

Open Access This article is licensed under a Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International License, which permits any non-commercial use, sharing, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if you modified the licensed material. You do not have permission under this licence to share adapted material derived from this article or parts of it. The images or other third party material in this article are included in the article’s Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by-nc-nd/4.0/.

Reprints and permissions

About this article

Check for updates. Verify currency and authenticity via CrossMark

Cite this article

Fakih, H.H., Zain UI Abideen, M., Rachid, M.O. et al. Intradermal delivery of lipophilic siRNAs enables prolonged skin retention and sustained gene silencing in a porcine model. Nat Commun (2026). https://doi.org/10.1038/s41467-026-68993-1

Download citation

  • Received: 19 June 2025

  • Accepted: 20 January 2026

  • Published: 03 February 2026

  • DOI: https://doi.org/10.1038/s41467-026-68993-1

Share this article

Anyone you share the following link with will be able to read this content:

Sorry, a shareable link is not currently available for this article.

Provided by the Springer Nature SharedIt content-sharing initiative

Download PDF

Advertisement

Explore content

  • Research articles
  • Reviews & Analysis
  • News & Comment
  • Videos
  • Collections
  • Subjects
  • Follow us on Facebook
  • Follow us on Twitter
  • Sign up for alerts
  • RSS feed

About the journal

  • Aims & Scope
  • Editors
  • Journal Information
  • Open Access Fees and Funding
  • Calls for Papers
  • Editorial Values Statement
  • Journal Metrics
  • Editors' Highlights
  • Contact
  • Editorial policies
  • Top Articles

Publish with us

  • For authors
  • For Reviewers
  • Language editing services
  • Open access funding
  • Submit manuscript

Search

Advanced search

Quick links

  • Explore articles by subject
  • Find a job
  • Guide to authors
  • Editorial policies

Nature Communications (Nat Commun)

ISSN 2041-1723 (online)

nature.com sitemap

About Nature Portfolio

  • About us
  • Press releases
  • Press office
  • Contact us

Discover content

  • Journals A-Z
  • Articles by subject
  • protocols.io
  • Nature Index

Publishing policies

  • Nature portfolio policies
  • Open access

Author & Researcher services

  • Reprints & permissions
  • Research data
  • Language editing
  • Scientific editing
  • Nature Masterclasses
  • Research Solutions

Libraries & institutions

  • Librarian service & tools
  • Librarian portal
  • Open research
  • Recommend to library

Advertising & partnerships

  • Advertising
  • Partnerships & Services
  • Media kits
  • Branded content

Professional development

  • Nature Awards
  • Nature Careers
  • Nature Conferences

Regional websites

  • Nature Africa
  • Nature China
  • Nature India
  • Nature Japan
  • Nature Middle East
  • Privacy Policy
  • Use of cookies
  • Legal notice
  • Accessibility statement
  • Terms & Conditions
  • Your US state privacy rights
Springer Nature

© 2026 Springer Nature Limited

Nature Briefing: Translational Research

Sign up for the Nature Briefing: Translational Research newsletter — top stories in biotechnology, drug discovery and pharma.

Get what matters in translational research, free to your inbox weekly. Sign up for Nature Briefing: Translational Research