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In vivo CAR T cell generation using retargeted and functionalized lentiviral vectors with reduced immunogenicity
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  • Published: 06 April 2026

In vivo CAR T cell generation using retargeted and functionalized lentiviral vectors with reduced immunogenicity

  • Kyrellos E. Ibrahim1,2 na1,
  • Kepler S. Mears1,2 na1,
  • Peter M. Allen1,2 na1,
  • Jordan M. Chinai1,2,3,
  • Omar I. Avila1,2,
  • Audrey J. Muscato  ORCID: orcid.org/0000-0003-2009-63131,2,
  • Sarah K. Lane-Reticker1,2,
  • Alexander Rojas1,2,
  • Nelson H. Knudsen1,2,
  • Chun-Cheih Chao1,2,
  • Kathleen B. Yates1,2 &
  • …
  • Robert T. Manguso  ORCID: orcid.org/0000-0003-1336-413X1,2 

Nature Communications , Article number:  (2026) Cite this article

We are providing an unedited version of this manuscript to give early access to its findings. Before final publication, the manuscript will undergo further editing. Please note there may be errors present which affect the content, and all legal disclaimers apply.

Subjects

  • Gene therapy
  • Nanoparticles
  • Targeted therapies
  • Translational immunology

Abstract

Despite striking efficacy against hematologic malignancies, the cost and complexity of CAR T manufacturing present significant barriers to broader patient access. Beyond manufacturing challenges, ex vivo expansion of T cells may be detrimental to their function and persistence. Thus, delivery of CARs to reprogram host cells in vivo would represent a significant advance towards a readily available therapy, but has been limited by low efficiency, low specificity, and immunogenicity of viral vectors. Here, we describe the design of pseudotyped lentiviral vectors (LV) with superior functionality and high target specificity. We show that LV pseudotyped with chimeric envelope glycoproteins from dolphin morbillivirus (DMV) can be engineered to selectively infect human T cells and evade neutralizing antibody responses in measles-vaccinated human serum. We further demonstrate that camelid-derived nanobodies are a superior retargeting domain, overcoming limitations inherent to the use of single-chain variable fragment antibodies. Using a chimeric DMV-pseudotyped virus targeting the CD7 receptor, we demonstrate efficient and highly specific infection of T cells both in vitro and in vivo, generating functional CAR T cells and inducing therapeutic efficacy in a preclinical B cell lymphoma model.

Data availability

Data supporting the findings of this work are available within the paper and the Source Data file. The immunofluorescence data generated in this study have been deposited in the BioImage Archive under accession code S-BIAD2901. Source data are provided with this paper.

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Acknowledgements

This work was supported by the Merkin Institute for Transformative Technologies in Healthcare and Calico Life Sciences. This work was supported in part by funding from Calico Life Sciences, LLC. We thank Branka Horvat and the Measles Virus Biobank for the generous gift of the CL55 and Y503 antibodies, INSERM, France, Measles Virus Biobank https://ciri.ens-lyon.fr/teams/IbIV/measles-biobank. We thank Natan Pirete and the Broad Institute Flow Cytometry Core for their help, training, and assistance in our flow cytometry experiments, and the Broad Institute mouse facilities for providing training and assistance with in vivo experiments. We would like to thank Professor Fritz Melcher from the German Rheumatology Research Center Leibniz-Institute for providing the FGK4.5 hybridoma, Dr. Hasaya Akiba for providing the RMT3-23 hybridoma, and Dr. Yoji Murata for providing the MY-1 and Miap301 hybridomas.

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  1. These authors contributed equally: Kyrellos E. Ibrahim, Kepler S. Mears, Peter M. Allen.

Authors and Affiliations

  1. Broad Institute of Massachusetts Institute of Technology and Harvard, Cambridge, MA, USA

    Kyrellos E. Ibrahim, Kepler S. Mears, Peter M. Allen, Jordan M. Chinai, Omar I. Avila, Audrey J. Muscato, Sarah K. Lane-Reticker, Alexander Rojas, Nelson H. Knudsen, Chun-Cheih Chao, Kathleen B. Yates & Robert T. Manguso

  2. Krantz Family Center for Cancer Research and Department of Medicine, Massachusetts General Hospital, Boston, MA, USA

    Kyrellos E. Ibrahim, Kepler S. Mears, Peter M. Allen, Jordan M. Chinai, Omar I. Avila, Audrey J. Muscato, Sarah K. Lane-Reticker, Alexander Rojas, Nelson H. Knudsen, Chun-Cheih Chao, Kathleen B. Yates & Robert T. Manguso

  3. Dana-Farber Cancer Institute, Gastrointestinal Cancer Center, Boston, MA, USA

    Jordan M. Chinai

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Contributions

K.S.M., K.B.Y., and R.T.M. conceived the project. K.E.I., K.S.M., and P.M.A. designed and conducted the majority of experiments, analyzed experimental data, and wrote the manuscript. O.I.A., A.J.M., S.K.L.R., A.R., and N.H.K. contributed to mouse and viral experiments. C.C. conducted preliminary experiments. J.M.C. conducted liver histology and analysis and contributed to manuscript preparation. K.B.Y. and R.T.M. supervised the work and wrote the manuscript.

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Correspondence to Kathleen B. Yates or Robert T. Manguso.

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Competing interests

R.T.M., K.B.Y., K.S.M., K.E.I., and P.M.A. are inventors on patent applications filed by the Broad Institute relating to retargeted retroviral vector technologies and the use of morbillivirus-derived and VHH-targeted vectors described in this work (U.S. Patent Application Publications US 2024/0294942 A1 and US 2024/0307555 A1). R.T.M. has received speaking or consulting fees from Bristol Myers Squibb, Gilead Sciences, Kumquat Biosciences, Immunai Therapeutics, and BioNTech and has equity ownership in OncoRev, LLC, and Jumble Therapeutics. The remaining authors declare no competing interests.

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Ibrahim, K.E., Mears, K.S., Allen, P.M. et al. In vivo CAR T cell generation using retargeted and functionalized lentiviral vectors with reduced immunogenicity. Nat Commun (2026). https://doi.org/10.1038/s41467-026-71395-y

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  • Received: 29 April 2025

  • Accepted: 18 March 2026

  • Published: 06 April 2026

  • DOI: https://doi.org/10.1038/s41467-026-71395-y

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