Introduction

Aggregation of the microtubule associated protein tau (MAPT) into paired helical filaments (PHFs) and neurofibrillary tangles (NFTs) is one of the key pathological hallmarks of Alzheimer’s disease (AD) and related primary tauopathies1,2,3. Post-translational modifications (PTMs) of the tau protein, mainly hyperphosphorylation, drives the pathological misfolding and aggregation process4,5. The accumulation of tau aggregates in the brain is strongly associated with cognitive decline and cortical atrophy in AD indicating that tau pathology is one of the main drivers of the neurodegenerative process6,7,8,9,10. Pathological tau (pTau) is also known to spread trans-neuronally and seed further tau aggregation in a prion-like fashion11,12,13,14,15,16,17,18,19. Therefore, it is important to develop therapeutics that specifically target pTau, promote its efficient clearance, and prevent it from seeding/spreading in the brain.

There are numerous disease-associated phosphorylation sites on the tau protein in AD and primary tauopathies including Thr181, Ser199, Ser202, Thr205, Ser208, Thr217, Thr231, Ser396, and Ser4043,20,21,22. The phosphorylation sites specifically recognized by the AT8 antibody (S199, S202, T205, and S208)23,24,25 and the phosphorylation sites recognized by the PHF1 antibody (S396 and S404)26 increase in the brain along with disease progression27,28,29,30,31. These sites are implicated in NFT formation21,27,28,32,33,34,35, and may reflect important steps in tau misfolding, assembly, or seed-competency contributing to the pathological process36,37,38,39,40.

The AT8 antibody is well known as the primary post-mortem diagnostic tool for Braak staging of tau pathology and mainly reflects late-stage pTau aggregates41. While the AT8 antibody is now generally referred to as the S202/T205 site25, previous work identified S199/S202 as AT8 antibody binding sites23,25,42, some studies suggested S199/S202 phosphorylation precedes T20521, and others identified S199/S202 as being a recognition site for the protein-tyrosine kinase Fyn involved in tau pathogenesis43. The S199 site in particular is also dramatically increased in phosphorylation at Braak stage V/VI of AD compared to other tau residues27,29,30. In contrast, S396/S404 phosphorylation (PHF1 site) appears at somewhat earlier disease stages than the S199/S202 site, though it is also more abundant at later Braak stages21,27,28,29,30,34. Due to their important role in disease pathogenesis, both the S199/S202 site and S396/S404 sites are reasonable targets for therapeutic development.

Recent success in anti-amyloidβ immunotherapies, such as Lecanemab44 and Donanemab45, has highlighted the efficacy of targeted antibody therapies for clearing protein aggregates from the brain. However, monoclonal antibody-based passive immunotherapies for tau have yet to show efficacy in clinical trials46 and have major limitations including expensive manufacturing and consumer costs, the need for frequent and repetitive dosing to maintain therapeutic antibody levels, and the accessibility of infusion centers for drug administration47,48,49,50,51. Active immunization using vaccines has the potential to avoid all of these limitations by harnessing the body’s immune system to generate a targeted antibody response against a desired immunogen. Indeed, several tau vaccines are currently undergoing early clinical trials, including the ACI-35 vaccine (AC Immune; presented at CTAD 2022) targeting the S396/S404 epitope and the AADvac1 vaccine (Axon Neuroscience SE) targeting a mid-region of tau. So far, these tau vaccines have proven to be safe in humans, but there is limited data showing efficacy for reducing tau pathology52,53,54. A major limitation for both of these vaccine platforms is related to their low immunogenicity with the need for multiple adjuvants, high doses of vaccine, and frequent boosting in order to elicit strong anti-tau antibody responses.

Virus-like particles (VLPs) are a highly effective approach for generating strong and durable antibody responses that can overcome self-tolerance mechanisms. VLP-based vaccines have already been approved by the Food and Drug Administration (FDA) for the prevention of numerous infectious diseases55, and are being investigated as vaccine platforms for other diseases including AD56,57,58,59,60. Qβ VLPs are recombinantly expressed Qβ bacteriophage coat proteins that spontaneously assemble into protein capsids that lack the genetic material to be infectious but strongly stimulate B cell responses59,61. VLPs can thus serve as a platform to display antigens of interest on their surface in a highly immunogenic fashion, owing to their dense, repetitive, and highly ordered array on the VLP surface that generates a strong antigen-specific antibody response without triggering autoreactive T cell responses observed in other vaccine platforms59,62,63.

Previously, we evaluated the efficacy of Qβ VLPs conjugated to phosphorylated tau at Thr181 (Qβ-pT181) in the rTg4510, P301S, and hTau mouse models of human tauopathy64. Qβ-pT181 immunized mice exhibited robust antibody responses, reduction in tau pathology, neuroinflammation, neurodegeneration, and cognitive decline57. However, tau protein can be differentially phosphorylated in AD and other tauopathies at different disease stages21, therefore, it is possible that vaccines targeting a single epitope may be inadequate to modify the disease process for all patients at all disease stages. With this in mind, we sought to utilize the Qβ VLP platform to target other key pathologically modified epitopes of tau to address our central question: does the pTau epitope used as the immunogen in a Qβ VLP vaccine strategy impact the vaccine efficacy in vivo? For this study, we developed and tested two additional Qβ VLPs targeting the dual phosphorylated S199/S202 (pS199/pS202) epitope and the dual phosphorylated S396/S404 (pS396/pS404) epitope which we will refer to as the AT8 and PHF1 sites respectively based on the recognition sites for these two well-known phospho-tau antibodies.

We sought to evaluate the efficacy of Qβ-AT8 and Qβ-PHF1 vaccines in the rTg4510 mouse model overexpressing human mutant P301L tau65,66. We observed that both vaccines successfully elicited robust IgG antibody responses against their respective pTau epitope but exhibited differential responses in protection against cognitive decline and tau pathology. The Qβ-PHF1 vaccine exhibited some protection against cognitive deficits, reductions in tau pathology with a preferential reduction of insoluble tau aggregates, and blunted inflammatory microgliosis. In contrast, the Qβ-AT8 vaccine failed to demonstrate any protection against tau pathology or cognitive deficits. This study is the first to directly compare the efficacy of these two epitopes using a vaccine strategy. These findings indicate that different pathological tau epitopes, when used as the immunogen in Qβ vaccines, confer differing levels of protection against tau pathology and disease progression in the rTg4510 animal model of tauopathy. This highlights the need for characterization of numerous pTau-therapeutic targets to identify the strongest candidates, or combinations thereof, for the development of successful immunotherapies against tauopathies.

Results

Qβ-AT8 and Qβ-PHF1 vaccines generate durable, high-titer antibody responses that are brain-penetrant

The Qβ-AT8 and Qβ-PHF1 vaccines were produced by conjugating tau peptides corresponding with residues 192–209 (with the pS199/pS202 AT8 phosphorylation sites) or residues 390–411 (with the pS396/pS404 PHF1 phosphorylation sites) (Fig. 1a) to pre-formed Qβ VLPs using a bifunctional crosslinker (Fig. 1b) as described previously57,59,60. By assessing the mobility shift in bands of Qβ-conjugated to pTau peptides compared to unconjugated Qβ on a denaturing SDS-PAGE gel, we estimated ~80 AT8 tau peptides or ~150 PHF1 tau peptides are displayed per assembled Qβ-VLP, which is composed of 180 monomers of the Qβ coat protein (Fig. 1c). Thus, both vaccines successfully displayed their respective pTau peptides on the VLP surface at high valency, with the Qβ-PHF1 VLP demonstrating a higher conjugation efficiency than the Qβ-AT8 VLP.

Fig. 1: Qβ-AT8 and Qβ-PHF1 VLP conjugation, treatment timeline, and antibody responses.
figure 1

a A 21-mer pTau peptide containing the Ser199/Ser202 phosphorylation sites (AT8 peptide) or a 25-mer pTau peptide containing the Ser396/Ser404 phosphorylation sites (PHF1 peptide) and a modified Gly-Gly-Cys (GGC) C-terminal sequence were individually conjugated to surface-exposed Lys residues on Qβ bacteriophage VLPs using SMPH crosslinker. b 2-month-old rTg4510 mice received three bi-weekly intramuscular vaccinations with either unconjugated Qβ Control VLP, Qβ-AT8 VLP, or Qβ-PHF1 VLP and were evaluated at 4.5-months for vaccine efficacy. c Upward mobility shift on a denaturing gel shows successful conjugation of AT8 or PHF1 peptides per Qβ coat protein monomer. d Qβ-AT8 and Qβ-PHF1 VLP vaccines elicited significantly elevated serum IgG antibody titers at 6-weeks and e 10-weeks post-vaccination compared to Qβ Control. f Serum IgG antibody titers remain unchanged between the 6- and 10-week timepoints. g Qβ-AT8 and Qβ-PHF1 VLP elicited antibody responses are detectable in hippocampal lysates. Graph displays mean ± SEM. p < 0.05*; p < 0.001***; p < 0.0001****; one-way ANOVA with Dunnett’s multiple comparisons. Qβ Control VLP (n = 5), Qβ-AT8 VLP (n = 7), or Qβ-PHF1 VLP (n = 8). a, b Were created by the authors using BioRender.com.

To assess the immunogenicity of the Qβ-AT8 and Qβ-PHF1 vaccines, we assessed serum antibody titers of Qβ-AT8, Qβ-PHF1, or unconjugated Qβ Control vaccinated rTg4510 tauopathy mice. Six weeks after the initial dose, both the Qβ-AT8 and Qβ-PHF1 vaccines elicited high-titer IgG responses against their respective pTau peptide targets whereas the Qβ Control group had no detectable antibodies against phosphorylated tau (Fig. 1d). The animals were sacrificed 10-weeks after the initial vaccination and end-point serum antibody titers showed consistently elevated antibody titers compared to Qβ Control (Fig. 1e) without a significant change in antibody titers compared to the 6-week timepoint (Fig. 1f). Hippocampal brain lysates were assessed for the presence of brain penetrant IgG against pTau. Both Qβ-AT8 and Qβ-PHF1 vaccinated brain lysates showed significant elevation of phosphorylated tau targeting antibodies compared to Qβ Control vaccinated rTg4510 mouse brain lysates (Fig. 1g).

Qβ-PHF1, but not Qβ-AT8 vaccination, showed modest rescue of hippocampal-dependent memory

To assess the effects of Qβ-AT8 and Qβ-PHF1 vaccination on cognitive function in the rTg4510 tauopathy model, we conducted the Novel Object Recognition (NOR) and Morris Water Maze (MWM) behavioral assessments approximately one month after the final vaccine dose. We first conducted the NOR behavioral task to assess changes in short-term memory67. On the sample day, all groups spent equal time investigating both objects indicating no preference for either object (Fig. 2a). On the test day, as expected, non-transgenic mice (B6) spent a greater fraction of time investigating the novel object, indicating intact recognition memory (Fig. 2b). There was no difference between time spent with the novel object and familiar object in the Qβ Control vaccinated rTg4510 tauopathy mice, indicating delay-dependent short-term working memory deficits (Fig. 2b). Notably, this deficit was rescued in the Qβ-PHF1 vaccinated rTg4510 mice, which spent more time with the novel object (Fig. 2b). However, Qβ-AT8 vaccination failed to rescue the recognition memory deficits, demonstrated by no preference for the novel object over the familiar (Fig. 2b).

Fig. 2: Qβ-PHF1 vaccination rescues delay-dependent memory deficits while Qβ-AT8 vaccination does not.
figure 2

a Novel Object Recognition (NOR) test sample day showed no difference in the time spent with each object for all groups. b. Twenty-four hours later (Test Day), non-transgenic (B6) mice spent significantly more time with the novel object. There was no difference in time spent with the novel object and familiar object for Qβ Control and Qβ-AT8 vaccinated rTg4510 mice, but this impairment was significantly rescued in Qβ-PHF1 vaccinated rTg4510 mice. c Hidden platform trials of the Morris Water Maze (MWM) test show that B6 mice had a shorter latency to find the platform than all rTg4510 vaccine groups. All rTg4510 vaccine groups exhibited hyperactivity based on distance traveled and velocity compared to B6 mice. d-e During the probe trial (platform removed), B6 mice spent significantly more time exploring the target quadrant. Qβ Control rTg4510 mice spent significantly more time in the wrong quadrants. Qβ-AT8 and Qβ-PHF1 vaccinated rTg4510 spent equal time in all quadrants, indicating a potentially milder impairment than Qβ Control mice but incomplete rescue of spatial memory. All graphs display mean ± SEM. Two-way ANOVA with Šidák correction (a, b). Two-way ANOVA with Dunnett’s correction comparing each group to the B6 group on each day (c). Student’s t-test (e). p < 0.05*, p < 0.01**, p < 0.001***. B6 (n = 9), Qβ Control (n = 7), Qβ-AT8 (n = 7), Qβ-PHF1 (n = 8). d Was created by the authors using BioRender.com.

Next, we conducted the MWM behavior task to assess hippocampal-dependent spatial working memory consolidation. For all groups, the latency to finding the platform decreased over each day of the 5-day training period indicating that the animals successfully learned the task of finding the platform (Fig. 2c). All of the rTg4510 groups regardless of vaccine treatment exhibited a significantly longer latency to the platform than the non-transgenic B6 group potentially indicative of impaired working memory consolidation (Fig. 2c). Additionally, all of the rTg4510 groups exhibited a longer path length and swimming velocity by the final training day which could potentially reflect the hyperactivity phenotype of this transgenic model. 24-hours after the conclusion of the 5-day training period, the hidden platform was removed (probe trial) and the amount of time the animals spent exploring the target quadrant was recorded (Fig. 2d). As expected, the non-transgenic B6 mice spent significantly more time in the target quadrant compared to the other quadrants indicating intact spatial memory (Fig. 2e). Comparatively, the Qβ Control vaccinated rTg4510 mice spent significantly more time exploring the other quadrants on average than the target quadrant indicating failure to consolidate the location of the platform (Fig. 2e). There was no significant difference between time spent in the target quadrant and the other quadrants in the Qβ-AT8 and Qβ-PHF1 vaccinated rTg4510 groups (Fig. 2e) indicating that these vaccines failed to rescue spatial memory deficits, however, the deficit may potentially have been less severe compared to the Qβ Control vaccinated rTg4510 group. Overall, the Qβ-PHF1 vaccinated rTg4510 group exhibited some rescue of hippocampal-dependent memory deficits observed in the Qβ Control vaccinated rTg4510 group, while the Qβ-AT8 vaccine offered no protection against tauopathy-induced memory deficits.

Qβ-PHF1 vaccination reduces soluble pathological tau levels in the brain, but Qβ-AT8 vaccination does not

To evaluate the effect of Qβ-AT8 and Qβ-PHF1 vaccination on tau pathology, we performed Western blot analysis of hippocampal lysates and immunohistochemical (IHC) staining on whole brain sections from vaccinated 4.5-month-old rTg4510 mice. Hyperphosphorylation and aggregation of tau as NFTs have been shown to occur as early as 2-4 months of age in rTg4510 mice65,66,68. Compared to Qβ Control vaccinated rTg4510 mice, the Qβ-PHF1 vaccinated rTg4510 mice showed significantly reduced AT180+ tau in the detergent soluble fraction (Fig. 3a, b) while total tau levels (Tau5) remained unchanged, indicating targeted reduction of AT180+ pTau (Fig. 3a, b). There was no significant change in tau phosphorylated at the AT8 or PHF1 sites (Fig. 3a, b). To validate the observed reduction in AT180+ pathological tau, we performed IHC staining of whole brain sections from the Qβ-PHF1 and Qβ Control vaccinated mice using the AT180 pathological tau marker (Fig. 3c). Compared to the Qβ Control vaccinated rTg4510 mice, the Qβ-PHF1 vaccinated rTg4510 mice exhibited a significant reduction in AT180 tau pathology in both the CA1 region of the hippocampus and the cerebral cortex (Fig. 3d). Notable changes in tau pathology include reductions in extracellular tau staining, less dense peri-nuclear tau inclusions within the neurons, and a reduction in dystrophic neurite neuropathology in favor of organized dendrites in the hippocampus (Fig. 3c). We also performed IHC staining in the Qβ-PHF1 and Qβ Control groups using the AT8 pTau marker but again found no differences (Supplementary Fig 1).

Fig. 3: Qβ-PHF1 vaccination reduces soluble pathological tau in the brains of rTg4510 mice, while Qβ-AT8 vaccination does not.
figure 3

a Western blot of soluble hippocampal lysates from Qβ Control and Qβ-PHF1 vaccinated rTg4510 mice were evaluated for markers of phosphorylated (AT8, AT180, PHF1) and total tau (Tau5). All samples were run on the same gel. b Compared to Qβ Control vaccinated mice, Qβ-PHF1 vaccinated mice showed a significant reduction in pathological AT180+ tau without any reduction in total physiologic tau. c. Immunohistochemistry of brain sections from Qβ Control and Qβ-PHF1 vaccinated rTg4510 mice staining for AT180 tau pathology in the cerebral cortex (CTX) and CA1 hippocampus. d There was a significant reduction in AT180+ tau pathology in both the cortex and hippocampus of Qβ-PHF1 vaccinated mice compared to Qβ Control mice (e, f). Western blot of soluble hippocampal lysates from Qβ Control and Qβ-AT8 vaccinated rTg4510 mice showed no significant reductions in pathological tau. All graphs display mean ± SEM. Student’s t-test (b, d, f). p < 0.05*; p < 0.001***; p < 0.0001****. Qβ Control (n = 5), Qβ-AT8 (n = 7), Qβ-PHF1 (n = 8).

Western blot analysis of hippocampal lysates for the Qβ-AT8 vaccinated groups revealed no changes in soluble pathological tau levels compared to the Qβ Control group (Fig. 3e). There were no significant differences in AT8, AT180, or PHF1-positive pathological tau nor changes in total tau levels assessed by Tau5 indicating that Qβ-AT8 vaccination failed to reduce tau pathology in the rTg4510 model of tauopathy but also did not alter total tau levels (Fig. 3f). Given our observations that the Qβ-AT8 vaccine failed to rescue cognitive deficits and similarly failed to reduce pathological tau levels, we decided not to pursue further investigation or characterization of this vaccine.

Qβ-PHF1 vaccination preferentially reduces levels of insoluble tau aggregates in rTg4510 mice

To assess the effects of Qβ-PHF1 vaccination on insoluble tau levels we performed a Sarkosyl insoluble extraction of tau from the pellet fraction separated from the detergent-soluble hippocampal lysates. Sarkosyl insoluble tau is composed of tau aggregates, the primary component of NFTs, which are correlated with disease progression and cognitive impairment33,69,70. Using Western blot analysis, we evaluated the levels of phosphorylated insoluble tau (AT8) and total insoluble human tau (Tau12) compared to the levels of their non-aggregated Sarkosyl soluble counterparts (Fig. 4a). We found that the ratio of Sarkosyl insoluble to Sarkosyl soluble AT8 and Tau12-positive tau were both significantly reduced in the Qβ-PHF1 vaccinated group compared to the Qβ Control vaccinated group (Fig. 4b). This data indicates that there is a preferential reduction in aggregated insoluble tau levels by Qβ-PHF1 vaccination.

Fig. 4: Qβ-PHF1 vaccination preferentially reduces Sarkosyl insoluble tau in rTg4510 mice and elicits antibodies specific to human pathological tau.
figure 4

a Western blot of Sarkosyl soluble and insoluble tau from Qβ-PHF1 and Qβ Control vaccinated mouse hippocampal samples b showing a significant reduction in the ratio of Sarkosyl insoluble/soluble AT8+ and Tau12+ tau in Qβ-PHF1 vaccinated mice compared to Qβ Control. c, d Gallyas silver impregnation of the cortex and CA1 hippocampal sections from Qβ-PHF1 and Qβ Control vaccinated mice showed a significant reduction in insoluble tau and dramatic clearance of NFTs of Qβ-PHF1 vaccinated mice compared to the Qβ Control group. e Qβ-PHF1 immune sera stained somatodendritic NFTs, pre-tangles, neuritic plaques, neuropil threads, and ghost tangles in human autopsy AD, but not non-AD, brain tissue. Qβ Control sera did not show any specific staining. AT8 antibody staining was used as a positive control. All graphs show mean ± SEM. Student’s t-test (b, d). p < 0.05*, p < 0.01**. b Qβ Control (n = 5), Qβ-PHF1 (n = 8). d Qβ Control (n = 5), Qβ-PHF1 (n = 5).

To further validate this finding, we performed Gallyas silver impregnation of whole brain sections from the Qβ-PHF1 and Qβ Control vaccinated rTg4510 mice to evaluate changes in NFT burden. Gallyas silver impregnation is the most sensitive and highly reproducible method for specifically staining NFTs whereby silver particles deposit on the argyrophilic NFT surface for histopathological visualization71,72. In the 4.5-month-old Qβ Control vaccinated rTg4510 mice, there was an abundance of neurons staining positively for NFTs in both the CA1 region of the hippocampus and the cerebral cortex (Fig. 4c). Qβ-PHF1 vaccinated mice showed a significant reduction in the number of neurons positively stained using the Gallyas silver impregnation method in both the CA1 hippocampus and the cerebral cortex (Fig. 4d). Taken together, the preferential reduction in Sarkosyl insoluble tau and NFT histopathology suggests that Qβ-PHF1 vaccination either preferentially promotes the clearance of NFTs from the brain or prevents the tau seeding and aggregation process that leads to the development NFTs within the brain.

Qβ-PHF1 vaccination elicits antibodies reactive to pathological tau on human autopsy brain sections

To further demonstrate the specificity of antibody responses induced by Qβ-PHF1 vaccination for pathological tau, we stained human AD and non-demented human healthy control brain tissue sections with immune sera from the Qβ-PHF1 and Qβ Control vaccinated mice. We used the AT8 antibody as a positive control to validate the presence of tau pathology in the human AD brain and the lack of tau pathology in the human non-AD brain (Fig. 4e). The human AD brain demonstrated numerous neuronal tau inclusions including pre-tangles, NFTs, ghost tangles, and dystrophic neurites including neuropil threads and neuritic plaques in concordance with the patient’s post-mortem pathological Braak staging of Braak VI (Fig. 4e). When stained using the whole immune sera from Qβ-PHF1 vaccinated mice, we observed robust staining of neuronal tau pathology including pre-tangles, NFTs, ghost tangles, neuropil threads, and neuritic plaques (Fig. 4e). The immune sera from Qβ Control vaccinated mice did not detect any tau pathology in the human AD brain section (Fig. 4e). The healthy human non-AD brain did not possess any tau inclusions as verified by AT8 staining. Importantly, no staining pattern was observed in the non-AD brain when stained with the Qβ-PHF1 vaccinated immune sera or with the Qβ Control immune sera (Fig. 4e). This data further demonstrates that Qβ-PHF1 vaccination does not engage healthy physiological tau but instead preferentially engages pathological tau.

We also performed staining of human AD hippocampal brain tissue sections with immune sera from Qβ-AT8 vaccinated mice which demonstrated specific detection of mature tau NFT pathology (Supplementary Fig. 2). Notably, Qβ-AT8 immune sera only detected somatodendritic NFT and ghost tangle pathology but did not exhibit substantial staining of neuropil threads, neuritic plaques, or immature pre-tangle tau accumulations observed with the AT8 antibody.

Qβ-PHF1 vaccination reduces reactive microgliosis and neuroinflammation in the rTg4510 model

Pathological tau has been shown to trigger a reactive inflammatory response in microglia, and numerous genome-wide association studies have implicated maladaptive innate immune responses as underlying mechanisms in the neurodegenerative process of AD and related tauopathies73,74,75,76,77,78,79,80,81. To evaluate the effect of Qβ-PHF1 vaccination on microglial histology in rTg4510 mice, we performed IHC staining of whole brain slices using the microglial marker, Iba1, and the marker of microglial activation, CD4582. We found that Qβ Control vaccinated rTg4510 mice exhibited a profound reactive microgliosis in the CA1 region of the hippocampus demonstrating a greater number of ameboid microglia with increased positivity for CD45 (Fig. 5a). Qβ-PHF1 vaccination showed a significant reduction in ameboid microglia indicated by reduced Iba1+ area (Fig. 5b). Additionally, Qβ-PHF1 vaccination resulted in a significant reduction in CD45 staining relative to the Qβ Control group further suggestive of a reduction in tau-mediated reactive microgliosis (Fig. 5b).

Fig. 5: Qβ-PHF1 vaccination reduces inflammatory microgliosis in rTg4510 mice.
figure 5

a, b IHC of Qβ Control and Qβ-PHF1 vaccinated rTg4510 mouse CA1 hippocampal brain sections using Iba1 and CD45 microglial markers showed a reduction in ameboid microglial morphology and overall Iba1 and CD45 staining in Qβ-PHF1 vaccinated mice compared to the Qβ Control group. c, d. Western blot of hippocampal lysates from Qβ Control and Qβ-PHF1 vaccinated mice showed a significant increase in IκB-α levels and pro-caspase-1 with a concomitant decrease in active caspase-1 and mature interleukin-1β cytokine levels in Qβ-PHF1 vaccinated mice compared to Qβ Control. e Gene expression of NF-κB-regulated genes (Nfkb1, Il1b, Il6, and Tnfa) and the microglial activation marker CD45 are reduced by Qβ-PHF1 vaccination compared to Qβ Control while the general microglial marker TMEM119 is unchanged. All graphs show mean ± SEM. Student’s t-test (b, d, e). p < 0.05*, p < 0.01**, p < 0.001***. b Qβ Control (n = 5), Qβ-PHF1 (n = 6,4). d Qβ Control (n = 5), Qβ-PHF1 (n = 8). E. Qβ Control (n = 4), Qβ-PHF1 (n = 7).

To assess the effects of Qβ-PHF1 vaccination on inflammatory signaling and inflammasome complex activation, we performed Western blot analysis on hippocampal lysates from Qβ Control and Qβ-PHF1 vaccinated rTg4510 mice (Fig. 5c). Qβ-PHF1 vaccinated mice exhibited a significantly greater level of the inhibitory subunit of the nuclear factor-kappa B (NF-κB) complex, I-kappa B alpha (IκB-α) (Fig. 5d). Additionally, the levels of the immature form of caspase-1 (pro-casp1), the effector protein of the inflammasome complex, were significantly elevated, while the active form (casp1) was significantly decreased in Qβ-PHF1 vaccinated mice (Fig. 5d). Consequently, the level of the mature inflammatory cytokine, interleukin-1β (IL-1β), which is matured by casp1 was also reduced (p = 0.0543) in Qβ-PHF1 vaccinated mice (Fig. 5d). Taken together, these data indicate that inflammatory signaling mediated by the inflammasome complex is reduced by Qβ-PHF1 vaccination in rTg4510 mice.

To validate our observation that Qβ-PHF1 vaccination exhibits an increase in IκB-α levels, we performed RT-qPCR gene expression on cortical brain samples from Qβ Control and Qβ-PHF1 vaccinated mice to assess the levels of NF-κB-mediated gene transcription. Qβ-PHF1 vaccination exhibited significant reductions in NF-κB1, IL-1β, IL-6, and TNF-α (p = 0.0657) transcription levels indicating functional inhibition of NF-κB-mediated inflammatory gene transcription by IκB-α (Fig. 5e). We also assessed the levels of TMEM119, a general marker of microglia, and the microglial activation marker, CD45. We found that TMEM119 was unchanged in Qβ-PHF1 vaccinated mice but CD45 expression was reduced (p = 0.0613), validating some of our findings observed by IHC (Fig. 5e).

To assess for the presence of autoreactive T cells in the brain, a potential risk when using active vaccine strategies that was once observed during clinical trials of the AN1792 amyloidβ vaccine83, we performed immunofluorescence staining of Qβ Control and Qβ-PHF1 vaccinated mice brain sections using the T cell marker CD3. Importantly, there was no CD3 immunoreactivity in the brains of either Qβ Control or Qβ-PHF1 vaccinated mice suggesting that there is no tau-reactive T cell response induced by our vaccine (Supplementary Fig 3), which aligns with previous observations that Qβ VLP vaccines typically do not elicit antigen-specific T cell responses59.

Together, this data suggests a reduction in microglial-mediated neuroinflammation as a consequence of pathological tau reduction by Qβ-PHF1 vaccination without any dangerous autoreactive T cell responses. Given that microglial dysfunction, including chronic inflammatory signaling, have been shown to contribute to further enhancement of tau accumulation in AD and tauopathy75,81,84,85,86,87,88,89,90, this reduction in reactive microgliosis may be another mechanism by which Qβ-PHF1 vaccination protects against disease progression.

Discussion

The central purpose of this investigation was to determine if either the AT8 or PHF1 phospho-tau epitopes, when displayed on Qβ VLPs, would be efficacious in generating targeted antibody responses, reducing tau pathology, and rescuing cognitive deficits in the rTg4510 model of tauopathy. Qβ VLPs have been shown to be safe and effective vaccine platforms, eliciting durable, high-titer antibody responses with few injections and without the need for additional adjuvants57,59,60,91,92, and exhibiting a good safety profile in animals and humans93, owing to their ability to avoid autoreactive cytotoxic or Th1 T-cell responses59,61,94. We previously developed a Qβ VLP displaying the pT181 phospho-tau epitope (Qβ-pT181), which demonstrated a robust efficacy at reducing tau pathology, rescuing cognitive deficits, reducing neuronal cell death, and attenuating microglial inflammation. This epitope was selected because it is one of the first sites to undergo phosphorylation early in AD pathogenesis21. Following similar rationale, we produced vaccines targeting the AT8 site and PHF1 site due to their importance as disease-specific phosphorylation sites. While both vaccines were highly immunogenic, eliciting high-titer antibody responses against their respective target in the vaccinated animals, only the Qβ-PHF1 vaccine was able to reduce tau pathology and rescue cognitive deficits. Immune sera from both the Qβ-PHF1 and Qβ-AT8 vaccines robustly detected tau pathology in human AD post-mortem brain tissue. However, the Qβ-AT8 immune sera exhibited a more limited range in tau pathology recognition (Supplementary Fig 2). This may explain the lack of tau clearance and cognitive protection by Qβ-AT8 in the rTg4510 mice compared to Qβ-PHF1.

Presently, we can only speculate why the PHF1-targeted vaccine was more efficacious than the AT8-targeted vaccine. Spatiotemporal differences in the AT8 and PHF1 phosphorylation sites may be a potential explanation. The AT8 and PHF1 sites are located on spatially distinct regions of the tau protein, within the more central proline-rich region (PRR) and the C-terminal region (CTR) respectively25,26. As the tau protein oligomerizes and eventually forms large aggregate structures, it can adopt numerous conformations where these epitopes may be more or less accessible57. Though the microtubule binding repeat domain (MTBR) is understood to be more involved in the amyloid core of paired helical filament tau structures leaving the PRR and CTR generally more accessible to antibody binding95,96, better characterization of tau aggregate conformers will help elucidate whether these epitopes become buried or inaccessible during the aggregation process. It is worth noting that our previous Qβ-pT181 vaccine also targeted the PRR of tau. While the Qβ-AT8 vaccine failed to reduce tau pathology or rescue any cognitive deficits, the Qβ-pT181 vaccine was highly potent at reducing tau pathology and rescuing cognitive function, with enhanced efficacy compared to Qβ-PHF157.

Temporal differences in the AT8 and PHF1 phosphorylation sites may best explain differences in vaccine efficacy. It has been well demonstrated that tau phosphorylation typically occurs in a sequential, site-specific manner during the disease process, with some phosphorylation sites appearing early-on followed by additional PTMs as the disease progresses21,27,30. The progression of tau pathology in the rTg4510 mouse model has been well characterized by others66,68,97,98. Song et al. demonstrated that the PHF1 phosphorylation sites are enriched in soluble tau species in rTg4510 mice as early as 6 weeks of age and accumulate in insoluble tau over time98. Contrastingly, the AT8 site was only detected in insoluble tau species as early as 16 weeks of age, with significant increases finally observed at 20 weeks of age98. The animals in our study were sacrificed at 18 weeks of age, prior to the time-point at which the AT8 site begins to dramatically increase in rTg4510 mice. Berger et al. also confirmed that the PHF1 antibody was able to detect both soluble and insoluble multimeric tau species (140 kDa and 170 kDa respectively) as early as 4-weeks of age while the AT8 antibody exclusively detected insoluble multimeric tau species (170 kDa) that did not appear until 18-weeks of age in rTg4510 mice97. The appearance of these epitopes at different time-points and in different tau fractions (soluble versus insoluble) may explain the difference in efficacy observed between the Qβ-AT8 and Qβ-PHF1 vaccines. Further supporting this notion, the pT181 site was also shown to be highly elevated in the soluble tau fraction as early as 6 weeks of age, with an increase in insoluble fractions over time, which coincides with the high efficacy observed in our previously published Qβ-pT181 vaccine98.

Here, we found that Qβ-PHF1 vaccination was able to reduce soluble pTau species while Qβ-AT8 vaccination was not. This distinguishing factor is likely responsible for the differences in cognitive rescue we observed. SantaCruz et al. demonstrated that after tau expression is suppressed, neurodegeneration stops and cognition improves even though NFTs continue to accumulate in the brains of rTg4510 mice66. Similarly, Spires et al. showed that NFT formation is not associated with neuronal cell death in either a spatial or temporal manner68. Both of these studies implicate soluble pTau species as the major driver of neurodegeneration in rTg4510 mice.

The delayed appearance of the pS199/pS202 site also occurs in human AD brains with abundant levels found at much later stages of disease, such as Braak stage V/VI, when substantial neurodegeneration has occured30,31. This site may appear too late in the disease process for successful therapeutic targeting, as suggested by the failure of our Qβ-AT8 vaccine to rescue cognition in rTg4510 mice. Alternatively, the rapid disease progression and short therapeutic timeline of our study in the rTg4510 model may have limited our ability to assess the efficacy of the Qβ-AT8 vaccine because the pS199/pS202 epitopes may not have been abundantly present for therapeutic targeting during our study period. Overall, our data suggest that therapeutic targeting of pathological tau epitopes that appear earlier in the disease process may yield the greatest protection against tau pathology and cognitive decline.

Additional characterization of the Qβ-AT8 and Qβ-PHF1 vaccines in other animal models of AD and tauopathy may be necessary to better understand the clinical translatability and clinical utility of these vaccines across tauopathies. The rTg4510 model is a highly aggressive tauopathy model that rapidly develops severe tau pathology. Alternative transgenic and knock-in human tauopathy animal models may provide a more nuanced understanding of the efficacy of these vaccines in human AD and tauopathy. It is notable that the Qβ-PHF1 vaccine was able to demonstrate cognitive rescue and reduction of tau pathology in the rTg4510 model given the severity of pathology in this model. VLP vaccines targeting tau pathology show strong potential for a multi-epitope immunotherapy approach, by combining VLPs targeting multiple pTau sites, for better addressing tau pathology in AD and primary tauopathies.

Methods

Production of Qβ-VLPs displaying phosphorylated S199/S202 (AT8) or phosphorylated S396/S404 (PHF1) tau peptides

Qβ VLPs were produced by purifying recombinantly expressed Qβ protein produced in Escherichia coli as described previously57,60,99. Phosphorylated tau peptides were synthesized (American Peptide, USA) using sequences from the full-length (441 amino acid) isoform of human microtubule associated protein tau and modified with a glycine-glycine-cysteine C-terminal sequence to facilitate conjugation to the Qβ VLPs (AT8 sequence: GDRSGYSpSPGpSPGTPGSR-GGC; PHF1 sequence: AEIVTKpSPVVSGDTpSPRRHLSN-GGC) (Fig. 1a). SMPH (Thermo Fisher Scientific, catalog # 22363) was used as a bifunctional cross-linker to conjugate the terminal cysteine residue on each pTau peptide to the surface exposed lysine residues on the Qβ VLPs59,61. Efficiency of conjugation was confirmed via mobility-shift gel electrophoresis on a 10% SDS denaturing polyacrylamide gel stained with Coomassie blue.

Animal models and vaccine treatment paradigm

All animal work in this study was reviewed and approved by the University of New Mexico Institutional Animal Care and Use Committee (IACUC) under the following protocols (IACUC protocol #s: 19-200841-B-HSC (Breeding); 18-200761-HSC (Experimental)). Bi-transgenic rTg4510 were created by crossing the tet-transactivator line, Tg(Camk2a-tTA)1Mmay (JAX, stock# 007004), to the Tet responsive element line, Tg(tet0-MAPT*P301L)#Kha/J (JAX, stock# 015815)65,68. All transgenic rTg4510 and non-transgenic C57Bl/6j mice were also obtained from the Jackson Laboratory. Animals were housed in a specific pathogen free (SPF) facility, in a 12 h light/dark cycle with ad libitum access to food and water, in 85 in ref. 2 ventilated microisolator cages, supplemented with sterilized and autoclaved TEK fresh standard crinkle bedding; environmental enrichment included tissue paper and an elevated penthouse insert. Mice used in this study were not used for breeding and were housed by sex at a density of two to five mice per cage.

All animal work in this study was performed simultaneously with our previously published investigation of the Qβ-pT181 vaccine57. As such, all animal behavior data from the B6 and Qβ groups (Fig. 2), Qβ antibody titers (Fig. 1d), and Qβ Control Western blot samples (Fig. 3a) have been previously published57, and were used here as matched controls in this study. The re-use of this data was permitted by the Creative Commons Attribution 4.0 International License (https://creativecommons.org/licenses/by/4.0/), and none of the data was changed from the original publication. All other data from the Qβ-AT8 and Qβ-PHF1 vaccine groups were generated exclusively for this study and have not been published previously. All animals chosen for experimental manipulation were healthy, of average weight, and had no history of rectal prolapse, skin dermatitis, or malocclusion. Beginning at 2 months, rTg4510 mice were treated with three, bi-weekly intramuscular injections into the rear hind-limb of either unconjugated Qβ (vaccine control) or Qβ-AT8 or Qβ-PHF1 (Fig. 1) at an approximate concentration of 5 µg of VLP/injection. No adverse events were observed in any of the treatment groups.

Antibody titers were assessed 6 weeks and 10 weeks after the initial injection. A battery of cognitive tests (NOR and MWM) was performed approximately one month following the final vaccination. Following the conclusion of the cognitive testing, the animals were sacrificed by transcardial perfusion with ice-cold phosphate buffer under deep anesthesia with intraperitoneal Avertin injection. The perfused brains were immediately removed, and the left hemispheres were immersion fixed in 4% paraformaldehyde (PFA; Electron Microscopy Services, catalog # RT15713) for neuropathological analysis via immunohistochemistry. The hippocampi from the right hemispheres were micro-dissected, weighed, snap frozen in liquid nitrogen, and stored at −80 °C until subsequent biochemical analyses.

Assessment of humoral immune responses in the serum and brain

To assess antibody titer responses to vaccination, blood was collected using a retro-orbital capillary collection method 6 weeks and 10 weeks after the initial injection. The blood was allowed to clot on ice for 20 minutes then centrifuged for 15 minutes at 15,000 g to separate the immune sera from the whole blood. Anti-pTau specific IgG titer responses were determined by endpoint dilution ELISA for each group of mice against their respective pTau peptide (AT8 peptide and PHF1 peptide). Briefly, Immulon-2 plates (Thermo Scientific) were incubated with 500 ng streptavidin (Thermo Fisher Scientific, catalog #434301) in pH 7.4 phosphate-buffered saline (PBS) overnight (ON) at 4 C. Following washing, SMPH was added to the wells at 250 ng/well and incubated for 2 h at room temperature (RT). In each group of experiments, each pTau peptide was added to the wells at 250 ng/well and incubated overnight at 4 C. The plate was subsequently blocked with 0.5% milk in PBS for 2 h. Four-fold dilutions of sera were added to each well and incubated for 2.5 h. The wells were probed with horseradish peroxidase (HRP)-conjugated secondary antibody [goat anti-mouse-IgG (Jackson ImmunoResearch, catalog #115-005-003; 1:4000)] for 1 hr. The reaction was developed using 3,3’, 5,5’-tetramethylbenzidine (TMB) substrate (Thermo Fisher Scientific, catalog # 34028) and stopped using 1% HCl. Reactivity of sera for the target antigen was determined by measuring optical density at 450 nm (OD450). Wells with twice the OD450 of the background were considered to be positive, and the highest dilution with a positive value was considered the end-point dilution titer. Antibody levels were measured in undiluted hippocampal brain lysates prepared in Tissue Protein Extraction Reagent (TPER®, Thermo Scientific, catalog # 78510) at 10% w/v with phosphatase and protease inhibitor cocktails (Sigma Aldrich, P5726 and P8340, respectively) using the same method described above for serum except a higher concentration of pTau peptides were used to coat the plate (1 μg/well).

Novel object recognition and Morris water maze behavioral tests

For all behavioral experiments, animals were randomized to a blinded cage label so that the experimenter was blinded to the genotype and treatment of the animal. The NOR test involved a three-day paradigm for assessment of delay-dependent memory formation67. On the first day, the animals were acclimated to a 75 cm2 arena, which they freely explored for 5 minutes. On the second day, the animals again freely explored the arena and became familiarized with two identical objects (glass jars) for 5 minutes. On the final day, one of the familiar objects was replaced with a novel object (plastic water bottle), and the animals freely explored the arena for 5 minutes. The percentage of time spent investigating each object was recorded using Ethovision XT8 (Noldus, Netherlands) live animal tracking with data processing in Excel and Prism.

The MWM test involved a six-day paradigm for assessment of learning and short-term spatial memory consolidation100,101. All animals were trained for 5 days (4 daily trials, approximately 25 min inter-trial interval) to find a hidden platform submerged beneath opacified water at 26 °C using spatial cues on the wall. During the acquisition phase, the animals freely navigated the tank of opaque water for 1 minute, and over 5 days (four trials daily) learned to navigate to a submerged platform using visual cues on the wall (visual cues were 2’ x 4’ made with different black/white shapes). Animals were randomized to search for a platform in a different area of the MWM, so results were counter-balanced; no bias was present in one quadrant over the others. Animals were singly housed and kept warm in cages between trials. On the sixth day, a probe trial was performed by removing the platform, and the percentage of time spent in the target quadrant vs. the other quadrants was recorded as a measurement of working spatial memory. All behavioral data were collected using Ethovision XT8 software (Noldus, Netherlands), and then processed in Excel and GraphPad Prism®.

Previous work65,66,68 demonstrated that behavioral impairments in rTg4510 mice develop over the 4–12-month period with a marked increase in hyperactivity occurring after 5-months potentially due to disruption of the Fgf14 gene and six other genes by the bi-transgenic insertion of the CaMK2a-tTA and tetO-MAPT*P301L transgenes102,103. All behavioral assessments were performed as close to 4-months of age as possible to avoid potential confounding risks of hyperactivity.

Immunohistochemistry and Immunofluorescence

4% PFA-fixed hemi-brains were sectioned into 30-µm-thick sagittal sections using a cryo-microtome. Free-floating sagittal sections derived from multiple mouse brains per group were utilized for all of the immunohistochemical analyses. First, sections were blocked in normal goat serum (NGS; Thermo Fisher Scientific) in 1x PBS pH7.4 with 0.4% Triton X-100 (PBST) for 1 h at room temperature and included with primary antibodies. Antibody dilutions were as follows: AT180 (Thermo Fisher Scientific, MN1040) at 1:500, AT8 (Thermo Fisher Scientific, MN1020) at 1:500, Iba1 (WAKO, 019-19741) at 1:500, and CD45 (BioRad, MCA43R) at 1:250 incubated overnight at 4 °C. Respective secondary antibodies conjugated to biotin (1:250, Jackson Immunoresearch) were incubated for 1 h at room temperature. Sections were incubated with Avidin/Biotin enzyme Complex (ABC reagent, Vector Laboratories; for immunohistochemistry) reagent for 1 h at room temperature. Immunoreactive signals were developed by incubating sections in 3-3’-diaminobenzadine (DAB) reagent (Vector Laboratories). Sections were mounted on glass slides, which were serially dehydrated in ethanol, cleared with xylenes, and mounted with Permount™ (Fischer Scientific).

Immunofluorescence staining was performed on 4%-PFA fixed brain tissue sections exactly as described above with a few modifications. Primary antibodies used were: NeuN (Millipore Sigma, MAB377) at 1:200 and CD3 (R&D, MAM4841) at 10 μg/mL incubated overnight at 4 °C. Respective secondary Alexa Fluor™ fluorophore conjugated antibodies (1:200, Invitrogen, A-21235 and A-11006) were incubated for 1 h at room temperature. The sections were mounted on glass slides, dried for 2 hours, and coverslips were affixed using Vectashield® antifade mounting medium with DAPI (Vector laboratories).

Bright field and fluorescent images were acquired using an Olympus BX-51 microscope (Olympus America Inc.), equipped with an Optronics CCD digital camera and Picture Frame image capture software (Optronics). Quantification of % area staining was performed using ImageJ (NIH) after RGB color deconvolution and thresholding to discern positive staining from background.

Gallyas silver impregnation

Gallyas silver impregnation staining was performed on 30-µm free-floating sagittal brain sections using a modified method for free-floating tissue samples as previously described57,104. 30-μm thick sections were washed with water, then incubated in 5% Periodic acid for 5 min, and washed with water again. Next, the sections were incubated for 1 min with a solution of alkaline silver iodide (containing sodium hydroxide, potassium iodide, and silver nitrate). Then the tissues were incubated for 10 min in 0.5% glacial acetic acid, then developed in developer solution for up to 5 min. Developer working solution was mixed at a ratio of 3 volumes of Solution II to 10 volumes of Solution I followed by addition of 7 volumes of Solution III: Stock Solution I: 5% sodium carbonate; Stock Solution II: 0.2% Sodium nitrate, 0.2% silver nitrate, 1% tungstosilicic acid; Stock Solution III: 0.2% ammonium nitrate, 0.2% silver nitrate, 1% tungstosilicic acid, 73% wt/vol formaldehyde (neat). After developing, the tissues were rinsed with 0.5% glacial acetic acid, rinsed with water, incubated with 0.1% gold chloride for 5 min, rinsed again with water, incubated with 1% sodium thiosulfate for 5 min, and finally rinsed once more with water. The silver impregnated sections were then mounted to glass slides, dried, rinsed carefully with xylene,s and then glass coverslips were affixed with Permount™ (Fischer Scientific).

Quantitative morphometry of gallyas silver impregnation

Bright field images of silver impregnated tissue sections were acquired at 40x magnification using an Olympus BX-51 microscope (Olympus America Inc.), equipped with an Optronics digital camera and Picture Frame image capture software (Optronics). CA1 hippocampus and overlying cerebral cortex were imaged from n = 5 mice per group. The number of cells stained positively by silver impregnation were manually counted (one field of view for CA1 hippocampus; average of three fields of view for cortex) for each brain section.

Characterization of antibody specificity in human brain tissue

Clinically and neuropathologically diagnosed human post-mortem autopsy brain sections were obtained from Drs. Elaine Bearer and Karen SantaCruz. All tissue samples were obtained with consent from the patient by the University of New Mexico Office of the Medical Investigator. Neuropathologically confirmed AD brain tissue samples came from an 84-year-old female patient with Braak stage VI tau pathology. Neuropathologically confirmed non-AD brain tissue came from a 55-year-old female patient. Immune sera collected from vaccinated animals two weeks after their final vaccination, as previously stated, were pooled (n = 5 animals per group) and diluted (1:500) in 5% NGS in PBST and used as a primary antibody to stain human AD and non-demented age-matched control human brain tissue sections. 8 µM thick formalin-fixed paraffin-embedded human brain tissue sections were deparaffinized in xylenes, serially rehydrated, and then boiled in 10 mM Sodium Citrate Buffer pH 6.0 with 0.05% Tween-20 at 95 °C for 30 min. The sections were washed with PBST, blocked in 5% NGS in PBST, and incubated overnight at 4 °C with primary antibody (either pooled Qβ Control or Qβ-PHF1 sera, or AT8) at a 1:500 dilution. Secondary antibody incubations and DAB immunoreactive signal development occurred as stated previously.

Western Blotting

Hippocampal brain tissue was homogenized for 1 min in Tissue Protein Extraction Reagent (TPER®, Thermo Scientific, catalog # 78510) at 10% w/v with phosphatase and protease inhibitor cocktails (Sigma Aldrich, P5726 and P8340, respectively), and then sonicated on ice for 30 s. Soluble hippocampal lysates were centrifuged at 12,000 g for 30 minutes at 4 °C to separate the soluble lysates from the insoluble pellet. Soluble protein samples were prepared with NuPAGE™ lithium dodecyl sulfate (LDS) and reducing agent (RA) (Thermo Fisher Scientific) and boiled at 95 °C for 15 min. Samples were resolved via NuPAGE™ 4-12% Bis-Tris Polyacrylamide gradient gels (Thermo Fisher Scientific) and immunoblotted overnight in transfer buffer57. All blots were processed in parallel and derived from the same experiment. Primary antibody dilutions were as follows: AT8 (Thermo Fisher Scientific (MN1020) 1:10,000; PHF1 (a kind gift from the late Peter Davies) 1:10,000; AT180 (Thermo Fisher Scientific, MN1040) 1:5,000; Tau5 (Millipore, MAB-361) 1:20,000; Tau12 (Millipore, MAB2241) 1:20,000; GAPDH (Millipore, AB2302) 1:20,000; IκB-α (Sigma-Aldrich, SAB5700704) 1:1000; ASC (Adipogen, AL177) 1:2000; Caspase-1 p20 (Adipogen, AG20B0042) 1:1000; IL-1β (Cell Signaling, 12242S) 1:1000. All uncropped, unedited images of Western blot films that were used in this study are provided in the Supplementary Information (Supplementary Fig. 4-7).

Sarkosyl-insoluble tau preparation

The Sarkosyl-insoluble fraction of tau was isolated from hippocampal samples as described previously69,84. The insoluble pellet generated from centrifugation of the 10% detergent soluble hippocampal lysates processed for Western blotting was sonicated in 10% wt/vol of cold buffer H (10 mM Tris-HCl, 1 mM EGTA, 0.8 mM NaCl, 10% sucrose, pH 7.4) supplemented by 0.1 mM PMSF (Sigma-Aldrich), with phosphatase and protease inhibitor cocktails (Sigma Aldrich, P5726 and P8340, respectively). The insoluble lysate was then centrifuged at 34,000×g in a Beckman Ti TLA-120.2 rotor for 30 min at 4 °C. The supernatant was adjusted to 1% (w/v) N-laurylsarcosine (Sigma-Aldrich) with 1% (v/v) 2-mercaptoethanol (Sigma-Aldrich) and incubated at 37 °C for 2 hr with agitation. The sample was then centrifuged at 100,000 RPM for 35 min at room temperature. The Sarkosyl-soluble supernatant was then collected and resuspended in 1× NuPAGE™ LDS Sample Buffer (Thermo Fisher Scientific). The Sarkosyl-insoluble pellet was washed several times in 1% Sarkosyl solution prepared in cold buffer H and then resuspended in 1x NuPAGE™ LDS Sample Buffer. The Sarkosyl-soluble and insoluble fractions were loaded separately onto NuPAGE™ 4-12% Bis-Tris Polyacrylamide Gels (Thermo Fisher Scientific) and immunoblotted as described in the Western Blotting section. The dilutions of primary and secondary antibodies were the same as previously stated.

RT-qPCR

RNA was extracted from the hemi-cortex using the TRIzol RNA isolation reagent (Invitrogen) as described by the manufacturer. RNA levels were quantified by Nanodrop 2000 spectrophotometer (Thermo Scientific). Total RNA was standardized (100 ng/μL) and converted to cDNA using the High Capacity cDNA Reverse Transcription kit and amplified using TaqMan Universal PCR Master Mix (Applied Biosystems) with the following gene specific probes (Nfkb1, Mm00476361_m1; Il6, Mm00446190_m1; Il1β, Mm00434228_m1; Tnfa, Mm00443258_m1; Tmem119, Mm00525305_m1; Ptprc (CD45), Mm01293577_m1; Gapdh, Mm99999915_g1) and normalized to endogenous Mouse Gapdh on the BioRad CFX96 Real Time System (all reagents from Thermo Fisher Scientific).

Statistical analysis and study blinding

Animal numbers for all experiments were determined by an a priori power analysis with a medium effect size and 80% statistical power to achieve significance at α = 0.05 (GraphPad Stat Mate 2.00). Statistical analyses were performed using GraphPad Prism (USA) software. Unless otherwise noted, all data are presented as mean ± SEM. A student’s t-test was employed when two groups were being analyzed. A one-way ANOVA, with Tukey’s post-hoc test for multiple comparisons, was used when investigating three or more groups. Two-way ANOVA with either Šidák or Dunnett’s correction for post-hoc multiple comparisons was used for analysis of the Novel Object Recognition and Morris Water Maze tests. All significance values are reported at an α = 0.05. Rout’s outlier analysis with a false discovery rate of 1% was performed on all data sets to identify and remove any outliers in all statistical analyses; the number of animals analyzed in each test is indicated in the figure legends.

All experiments were performed using a unique pathology numbering system (for necropsy studies) to avoid any subjective bias. Experimenters were blinded to the genotype and vaccine treatment performed for all experiments in this study. Genotype and treatment information was only made available after the completion of the analyses.