Fig. 4: Local conformations of different Cy3-labeled EF-G-A209C variants.
From: Photostability of organic fluorophore influenced by adjacent amino acid residues
A Steady conformations of Cy3-labeled EF-G-A209C variants revealed by MD simulation. The conformations of different EF-G variants were superimposed based on sites 206–240 (gray). Locations of Cy3 in different conformations are shown as spheres, labeled by the adjacent side chains and colored by total emitted photon counts. The color scale is shown. B Violin plots showing distributions of distances between the center C atom of Cy3 (C11) and the C atom of the amide groups in its nearby residues (sites 204–214).
