Skip to main content

Thank you for visiting nature.com. You are using a browser version with limited support for CSS. To obtain the best experience, we recommend you use a more up to date browser (or turn off compatibility mode in Internet Explorer). In the meantime, to ensure continued support, we are displaying the site without styles and JavaScript.

  • Article
  • Published:

Intermolecular asymmetric functionalization of unstrained C(sp3)–C(sp3) bonds in allylic substitution reactions

Abstract

Catalytic asymmetric functionalization of unstrained C(sp3)–C(sp3) bonds is a promising strategy to edit the structure of a molecule stereoselectively, but such reactions are rare. Existing methods for the catalytic functionalization of C–C bonds typically involve C–C bonds in strained structures. Here we report a strategy to achieve unexplored enantioselective functionalizations of allylic C(sp3)–C(sp3) bonds. Protocols for both kinetic resolution and dynamic kinetic asymmetric transformation are established to construct new C–C bonds at the position of a C(sp3)–C(sp3) bond in the reactant. This study shows that enantioselective functionalizations can be achieved even at unstrained C–C bonds, and an alkyl C–C bond can also work as a leaving group instead of a stable product in enantioselective allylic substitution reactions. Mechanistic experiments and density functional theory calculations reveal that deracemization by the formation of dienes enables the process to occur as a dynamic kinetic asymmetric transformation.

This is a preview of subscription content, access via your institution

Access options

Buy this article

USD 39.95

Prices may be subject to local taxes which are calculated during checkout

Fig. 1: Background and our design.
Fig. 2: Scope of asymmetric allylic C(sp3)–C(sp3) bond alkylation via KRa.
Fig. 3: Scope of asymmetric allylic C(sp3)–C(sp3) bond alkylation via DYKAT and applicationsa.
Fig. 4: Experimental mechanistic studies for DYKAT process.
Fig. 5: DFT calculations of the reaction between 1b and 2i under conditions for DYKAT.

Similar content being viewed by others

Data availability

All relevant data are available within the paper and in the Supplementary Information files.

References

  1. Xia, Y., Lu, G., Liu, P. & Dong, G. Catalytic activation of carbon–carbon bonds in cyclopentanones. Nature 539, 546–550 (2016).

    CAS  PubMed  PubMed Central  Google Scholar 

  2. Bender, M., Turnbull, B. W. H., Ambler, B. R. & Krische, M. J. Ruthenium-catalyzed insertion of adjacent diol carbon atoms into C–C bonds: entry to type II polyketides. Science 357, 779–781 (2017).

    CAS  PubMed  PubMed Central  Google Scholar 

  3. Bruffaerts, J., Pierrot, D. & Marek, I. Efficient and stereodivergent synthesis of unsaturated acyclic fragments bearing contiguous stereogenic elements. Nat. Chem. 10, 1164–1170 (2018).

    CAS  PubMed  PubMed Central  Google Scholar 

  4. Smaligo, A. J. et al. Hydrodealkenylative C(sp3)–C(sp2) bond fragmentation. Science 364, 681–685 (2019).

    CAS  PubMed  PubMed Central  Google Scholar 

  5. Xu, Y. et al. Deacylative transformations of ketones via aromatization-promoted C–C bond activation. Nature 567, 373–378 (2019).

    CAS  PubMed  PubMed Central  Google Scholar 

  6. Liu, J. et al. Nitromethane as a nitrogen donor in Schmidt-type formation of amides and nitriles. Science 367, 281–285 (2020).

    CAS  PubMed  Google Scholar 

  7. Marchese, A. D., Mirabi, B., Johnson, C. E. & Lautens, M. Reversible C–C bond formation using palladium catalysis. Nat. Chem. 14, 398–406 (2022).

    CAS  PubMed  Google Scholar 

  8. Woo, J. et al. Scaffold hopping by net photochemical carbon deletion of azaarenes. Science 376, 527–532 (2022).

    CAS  PubMed  PubMed Central  Google Scholar 

  9. Feng, Q., Wang, Q. & Zhu, J. Oxidative rearrangement of 1,1-disubstituted alkenes to ketones. Science 379, 1363–1368 (2023).

    CAS  PubMed  Google Scholar 

  10. Chen, F., Wang, T. & Jiao, N. Recent advances in transition metal-catalyzed functionalization of unstrained carbon−carbon bonds. Chem. Rev. 114, 8613–8661 (2014).

    CAS  PubMed  Google Scholar 

  11. Souillart, L. & Cramer, N. Catalytic C–C bond activations via oxidative addition to transition metals. Chem. Rev. 115, 9410–9464 (2015).

    CAS  PubMed  Google Scholar 

  12. Fumagalli, G., Stanton, S. & Bower, J. F. Recent methodologies that exploit C–C single-bond cleavage of strained ring systems by transition metal complexes. Chem. Rev. 117, 9404–9432 (2017).

    CAS  PubMed  Google Scholar 

  13. Song, F., Gou, T., Wang, B. Q. & Shi, Z. J. Catalytic activations of unstrained C–C bond involving organometallic intermediates. Chem. Soc. Rev. 47, 7078–7115 (2018).

    CAS  PubMed  Google Scholar 

  14. Xia, Y. & Dong, G. Temporary or removable directing groups enable activation of unstrained C–C bonds. Nat. Rev. Chem. 4, 600–614 (2020).

    CAS  PubMed  PubMed Central  Google Scholar 

  15. McDonald, T. R., Mills, L. R., West, M. S. & Rousseaux, S. A. L. Selective carbon–carbon bond cleavage of cyclopropanols. Chem. Rev. 121, 3–79 (2021).

    CAS  PubMed  Google Scholar 

  16. Cohen, Y., Cohen, A. & Marek, I. Creating stereocenters within acyclic systems by C–C bond cleavage of cyclopropanes. Chem. Rev. 121, 140–161 (2021).

    CAS  PubMed  Google Scholar 

  17. Murakami, M. & Ishida, N. Cleavage of carbon–carbon σ-bonds of four-membered rings. Chem. Rev. 121, 264–299 (2021).

    CAS  PubMed  Google Scholar 

  18. Yu, X.-Y., Chen, J.-R. & Xiao, W.-J. Visible light-driven radical-mediated C–C bond cleavage/functionalization in organic synthesis. Chem. Rev. 121, 506–561 (2021).

    CAS  PubMed  Google Scholar 

  19. Bi, X., Zhang, Q. & Gu, Z. Transition-metal-catalyzed carbon carbon bond activation in asymmetric synthesis. Chin. J. Chem. 39, 1397–1412 (2021).

    CAS  Google Scholar 

  20. Matsumura, S., Maeda, Y., Nishimura, T. & Uemura, S. Palladium-catalyzed asymmetric arylation, vinylation, and allenylation of tert-cyclobutanols via enantioselective C–C bond cleavage. J. Am. Chem. Soc. 125, 8862–8869 (2003).

    CAS  PubMed  Google Scholar 

  21. Wender, P. A. et al. Asymmetric catalysis of the [5+2] cycloaddition reaction of vinylcyclopropanes and π systems. J. Am. Chem. Soc. 128, 6302–6303 (2006).

    CAS  PubMed  Google Scholar 

  22. Matsuda, T., Shigeno, M., Makino, M. & Murakami, M. Asymmetric synthesis of 3,4‐dihydrocoumarins by rhodium‐catalyzed reaction of 3‐(2‐hydroxyphenyl)cyclobutanones. J. Am. Chem. Soc. 129, 12086–12087 (2007).

    CAS  PubMed  Google Scholar 

  23. Seiser, T. & Cramer, N. Enantioselective C–C bond activation of allenyl cyclobutanes: access to cyclohexenones with quaternary stereogenic centers. Angew. Chem. Int. Ed. 47, 9294–9297 (2008).

    CAS  Google Scholar 

  24. Kleinbeck, F. & Toste, F. D. Gold(I)-catalyzed enantioselective ring expansion of allenylcyclopropanols. J. Am. Chem. Soc. 131, 9178–9179 (2009).

    CAS  PubMed  PubMed Central  Google Scholar 

  25. Moran, J., Smith, A. G., Carris, R. M., Johnson, J. S. & Krische, M. J. Polarity inversion of donor−acceptor cyclopropanes: disubstituted δ-lactones via enantioselective iridium catalysis. J. Am. Chem. Soc. 133, 18618–18621 (2011).

    CAS  PubMed  PubMed Central  Google Scholar 

  26. Waibel, M. & Cramer, N. Desymmetrizations of meso-tert-norbornenols by rhodium(I)-catalyzed enantioselective retro-allylations. Chem. Commun. 47, 346–348 (2011).

    CAS  Google Scholar 

  27. Lin, M., Kang, G.-Y., Guo, Y.-A. & Yu, Z.-X. Asymmetric Rh(I)-catalyzed intramolecular [3+2] cycloaddition of 1-yne-vinylcyclopropanes for bicyclo[3.3.0] compounds with a chiral quaternary carbon stereocenter and density functional theory study of the origins of enantioselectivity. J. Am. Chem. Soc. 134, 398–405 (2012).

    CAS  PubMed  Google Scholar 

  28. Xiong, H., Xu, H., Liao, S., Xie, Z. & Tang, Y. Copper-catalyzed highly enantioselective cyclopentannulation of indoles with donor–acceptor cyclopropanes. J. Am. Chem. Soc. 135, 7851–7854 (2013).

    CAS  PubMed  Google Scholar 

  29. Zhou, X. & Dong, G. Nickel‐catalyzed chemo‐ and enantioselective coupling between cyclobutanones and allenes: rapid synthesis of [3.2.2] bicycles. Angew. Chem. Int. Ed. 55, 15091–15095 (2016).

    CAS  Google Scholar 

  30. Trost, B. M., Bai, W.-J., Hohn, C., Bai, Y. & Cregg, J. J. Palladium-catalyzed asymmetric allylic alkylation of 3-substituted 1H-indoles and tryptophan derivatives with vinylcyclopropanes. J. Am. Chem. Soc. 140, 6710–6717 (2018).

    CAS  PubMed  Google Scholar 

  31. Cheng, Q., Xie, J.-H., Weng, Y.-C. & You, S.-L. Pd-catalyzed dearomatization of anthranils with vinylcyclopropanes by [4+3] cyclization reaction. Angew. Chem. Int. Ed. 58, 5739–5743 (2019).

    CAS  Google Scholar 

  32. Jiang, C. et al. Enantioselective copper‐catalyzed trifluoromethylation of benzylic radicals via ring opening of cyclopropanols. Chem 6, 2407–2419 (2020).

    CAS  Google Scholar 

  33. Bitai, J., Nimmo, A. J., Slawin, A. M. Z. & Smith, A. D. Cooperative palladium/isothiourea catalyzed enantioselective formal (3+2) cycloaddition of vinylcyclopropanes and α,β-unsaturated esters. Angew. Chem. Int. Ed. 61, e202202621 (2022).

    CAS  Google Scholar 

  34. Cao, J., Wu, H., Wang, Q. & Zhu, J. C–C bond activation enabled by dyotropic rearrangement of Pd(IV) species. Nat. Chem. 13, 671–676 (2021).

    CAS  PubMed  PubMed Central  Google Scholar 

  35. Wen, L. et al. Multiplicative enhancement of stereoenrichment by a single catalyst for deracemization of alcohols. Science 382, 458–464 (2023).

    CAS  PubMed  Google Scholar 

  36. Trost, B. M. & Van Vranken, D. L. Asymmetric transition metal-catalyzed allylic alkylations. Chem. Rev. 96, 395–422 (1996).

    CAS  PubMed  Google Scholar 

  37. Butt, N. A. & Zhang, W. Transition metal-catalyzed allylic substitution reactions with unactivated allylic substrates. Chem. Soc. Rev. 44, 7929–7967 (2015).

    CAS  PubMed  Google Scholar 

  38. Rössler, S. L., Petrone, D. A. & Carreira, E. M. Iridium-catalyzed asymmetric synthesis of functionally rich molecules enabled by (phosphoramidite, olefin) ligands. Acc. Chem. Res. 52, 2657–2672 (2019).

    PubMed  Google Scholar 

  39. Süüsse, L. & Stoltz, B. M. Enantioselective formation of quaternary centers by allylic alkylation with first-row transition-metal catalysts. Chem. Rev. 121, 4084–4099 (2021).

    Google Scholar 

  40. Pàmies, O. et al. Recent advances in enantioselective Pd-catalyzed allylic substitution: from design to applications. Chem. Rev. 121, 4373–4505 (2021).

    PubMed  PubMed Central  Google Scholar 

  41. Wang, R., Luan, Y. & Ye, M. Transition metal–catalyzed allylic C(sp3)–H functionalization via η3-allylmetal intermediate. Chin. J. Chem. 37, 720–743 (2019).

    CAS  Google Scholar 

  42. Wang, P.-S. & Gong, L.-Z. Palladium-catalyzed asymmetric allylic C–H functionalization: mechanism, stereo- and regioselectivities, and synthetic applications. Acc. Chem. Res. 53, 2841–2854 (2020).

    CAS  PubMed  Google Scholar 

  43. Covell, D. J. & White, M. C. A chiral Lewis acid strategy for enantioselective allylic C–H oxidation. Angew. Chem. Int. Ed. 47, 6448–6451 (2008).

    CAS  Google Scholar 

  44. Du, H., Zhao, B. & Shi, Y. Catalytic asymmetric allylic and homoallylic diamination of terminal olefins via formal C–H activation. J. Am. Chem. Soc. 130, 8590–8591 (2008).

    CAS  PubMed  PubMed Central  Google Scholar 

  45. Chai, Z. & Rainey, T. J. Pd(II)/Brønsted acid catalyzed eantioselective allylic C–H activation for the synthesis of spirocyclic rings. J. Am. Chem. Soc. 134, 3615–3618 (2012).

    CAS  PubMed  Google Scholar 

  46. Li, J. et al. Site-specific allylic C–H bond functionalization with a copper-bound N-centred radical. Nature 574, 516–521 (2019).

    CAS  PubMed  Google Scholar 

  47. Cheung, K. P. S., Fang, J., Mukherjee, K., Mihranyan, A. & Gevorgyan, V. Asymmetric intermolecular allylic C–H amination of alkenes with aliphatic amines. Science 378, 1207–1213 (2022).

    Google Scholar 

  48. Nilsson, Y. I., Andersson, P. G. & Bäckvall, J.-E. Example of thermodynamic control in palladium-catalyzed allylic alkylation. Evidence for palladium-assisted allylic carbon-carbon bond cleavage. J. Am. Chem. Soc. 115, 6609–6613 (1993).

    CAS  Google Scholar 

  49. Bricout, H., Carpentier, J.-F. & Mortreux, A. Further developments in metal-catalyzed C–C bond cleavage in allylic dimethyl malonate derivatives. Tetrahedron Lett. 38, 1053–1056 (1997).

    CAS  Google Scholar 

  50. Nečas, D., Turský, M. & Kotora, M. Catalytic deallylation of allyl- and diallylmalonates. J. Am. Chem. Soc. 126, 10222–10223 (2004).

    PubMed  Google Scholar 

  51. Clavier, H., Giordano, L. & Tenaglia, A. Palladium-mediated phosphine-dependent chemoselective bisallylic alkylation leading to spirocarbocycles. Angew. Chem. Int. Ed. 51, 8648–8651 (2012).

    CAS  Google Scholar 

  52. Higashida, K., Smail, V., Nagae, H., Carpentier, J.-F. & Mashima, K. Nickel-catalyzed asymmetric allylic alkylation of β‑dicarbonyl compounds via C−C bond activation of 2‑allylated cyclic 1,3-diketones. ACS Catal. 13, 2156–2161 (2023).

    CAS  Google Scholar 

  53. Granberg, K. L. & Bäckvall, J.-E. Isomerization of (π-allyl)palladium complexes via nucleophilic displacement by palladium(0). A common mechanism in palladium(0)-catalyzed allylic substitution. J. Am. Chem. Soc. 114, 6858–6863 (1992).

    CAS  Google Scholar 

Download references

Acknowledgements

Z.-T.H. acknowledges the Science and Technology Commission of Shanghai Municipality (grant no. 22ZR1475200), National Natural Science Foundation of China (grant nos. 22071262 and 22371292), Strategic Priority Research Program of the Chinese Academy of Sciences (grant no. XDB0610000), Ningbo Natural Science Foundation (grant no. 2023J036), State Key Laboratory of Organometallic Chemistry and Shanghai Institute of Organic Chemistry for financial support. J.F.H. acknowledges financial support from National Institutes of Health (grant no. 1R35GM130387).

Author information

Authors and Affiliations

Authors

Contributions

Z.-T.H. conceived the project. Y.-W.C. and Y.L. performed the experiments. Y.Q. conducted the DFT calculations. Z.-T.H., J.F.H. and G.-Q.L. supervised the project. Z.-T.H. wrote the manuscript with the feedback from all authors. Z.-T.H. and J.F.H. coreviewed and edited the manuscript.

Corresponding authors

Correspondence to John F. Hartwig or Zhi-Tao He.

Ethics declarations

Competing interests

The authors declare no competing interests.

Peer review

Peer review information

Nature Synthesis thanks Xi-Sheng Wang, Ronglin Zhong and the other, anonymous, reviewer(s) for their contribution to the peer review of this work. Primary Handling Editor: Peter Seavill, in collaboration with the Nature Synthesis team.

Additional information

Publisher’s note Springer Nature remains neutral with regard to jurisdictional claims in published maps and institutional affiliations.

Supplementary information

Supplementary Information (download PDF )

Experimental details, Figs. 1–14 and Tables 1–3.

Source data

Source Data Fig. 4 (download XLSX )

Source data for the graph in Fig. 4b.

Rights and permissions

Springer Nature or its licensor (e.g. a society or other partner) holds exclusive rights to this article under a publishing agreement with the author(s) or other rightsholder(s); author self-archiving of the accepted manuscript version of this article is solely governed by the terms of such publishing agreement and applicable law.

Reprints and permissions

About this article

Check for updates. Verify currency and authenticity via CrossMark

Cite this article

Chen, YW., Qiu, Y., Liu, Y. et al. Intermolecular asymmetric functionalization of unstrained C(sp3)–C(sp3) bonds in allylic substitution reactions. Nat. Synth 3, 1011–1020 (2024). https://doi.org/10.1038/s44160-024-00555-z

Download citation

  • Received:

  • Accepted:

  • Published:

  • Version of record:

  • Issue date:

  • DOI: https://doi.org/10.1038/s44160-024-00555-z

Search

Quick links

Nature Briefing

Sign up for the Nature Briefing newsletter — what matters in science, free to your inbox daily.

Get the most important science stories of the day, free in your inbox. Sign up for Nature Briefing