Extended Data Fig. 6: Gene expression changes in SMC-derived cells after 12 weeks of plaque regression.

Differentially expressed genes (DEGs) were analyzed in SMC-derived cell clusters (C0-C4). Volcano plots show DEGs in each cluster. The top 10 downregulated and upregulated genes upon 12 weeks of ApoB-LP lowering are shown in cyan and ochre, respectively. Analysis was performed using the MAST method in Seurat with P values adjusted for multiple testing by the Bonferroni method.