Extended Data Fig. 6: Quality control for CITE-sequencing and gene expression signatures of major cell types and subclusters.
From: The immune checkpoint regulator CD40 potentiates myocardial inflammation
a, Dot plot of differentially expressed genes for the major cell types. b, Violin plot of percentage mitochondrial reads per cell. Cells were filtered to include those with 1,000 < RNA unique molecular identifier (UMI) count < 20,000, and mitochondrial reads less than 5%. c, Heatmaps showing relative expression profiles of major cell types, d, mononuclear phagocytes, and e, T-cells and NK-cells.
