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Showing 1–41 of 41 results
Advanced filters: Author: Jake F. Watson Clear advanced filters
  • The discovery of a vast reservoir of primordial neutral hydrogen gas surrounding a young galaxy cluster just one billion years after the Big Bang offers new insight into how the first large cosmic structures assembled.

    • Kasper E. Heintz
    • Jake S. Bennett
    • Alba Covelo-Paz
    Research
    Nature Astronomy
    P: 1-9
  • An analysis of 24,202 critical cases of COVID-19 identifies potentially druggable targets in inflammatory signalling (JAK1), monocyte–macrophage activation and endothelial permeability (PDE4A), immunometabolism (SLC2A5 and AK5), and host factors required for viral entry and replication (TMPRSS2 and RAB2A).

    • Erola Pairo-Castineira
    • Konrad Rawlik
    • J. Kenneth Baillie
    ResearchOpen Access
    Nature
    Volume: 617, P: 764-768
  • Long distance interfaces between superconducting quantum information processing nodes would require coherent, efficient and low-noise microwave-to-optical conversion. Here, the authors use Yb ion ensembles in yttrium orthovanadate to demonstrate a transducer with the potential to fulfill these requirements.

    • John G. Bartholomew
    • Jake Rochman
    • Andrei Faraon
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-6
  • Solid-state emitters enable broadband quantum information storage, but they are affected by decoherence resulting from inhomogeneous broadening. Here the authors suppress this effect via cavity protection at the single photon level in an ensemble of rare-earth ions coupled to a nanophotonic resonator.

    • Tian Zhong
    • Jonathan M. Kindem
    • Andrei Faraon
    ResearchOpen Access
    Nature Communications
    Volume: 8, P: 1-7
  • This study examines karyotypic selection and evolution in vitro using immortalized mammary and kidney epithelial cell lines, observing aneuploidy patterns specific to each origin tissue that are correlated with frequencies in patient tumors and independent of drivers such as TP53 mutation.

    • Emma V. Watson
    • Jake June-Koo Lee
    • Stephen J. Elledge
    ResearchOpen Access
    Nature Genetics
    Volume: 56, P: 900-912
  • Changes in AMPAR localization can control the strength of synaptic transmission. Here, the authors show that the interactions of TARP γ8 and the AMPAR N-terminal domain work together to regulate receptor accumulation and positioning at the post-synapse of mouse hippocampal CA1 neurons.

    • Jake F. Watson
    • Alexandra Pinggera
    • Ingo H. Greger
    ResearchOpen Access
    Nature Communications
    Volume: 12, P: 1-15
  • A global network of researchers was formed to investigate the role of human genetics in SARS-CoV-2 infection and COVID-19 severity; this paper reports 13 genome-wide significant loci and potentially actionable mechanisms in response to infection.

    • Mari E. K. Niemi
    • Juha Karjalainen
    • Chloe Donohue
    ResearchOpen Access
    Nature
    Volume: 600, P: 472-477
  • Peter Donnelly and colleagues report fine mapping of 14 susceptibility loci in 8,000 cases and controls for type 2 diabetes, coronary artery disease and Graves' disease. They apply a new Bayesian method for analysis of fine-mapping data sets, using this to define sets of SNPs likely to contain causal disease-associated variants.

    • Julian B Maller
    • Gilean McVean
    • Peter Donnelly
    Research
    Nature Genetics
    Volume: 44, P: 1294-1301
  • Ribosomal DNA transcription is essential for cell growth and division. Here, the authors show that EMT is accompanied by Snail binding to rDNA operons and Rictor association with nucleoli to fuel an induction of ribosome biogenesis during G1/S cell cycle arrest and inhibition of ribosome biogenesis hampers EMT, differentiates primary tumors and reduces metastasis.

    • Varsha Prakash
    • Brittany B. Carson
    • C. Theresa Vincent
    ResearchOpen Access
    Nature Communications
    Volume: 10, P: 1-16
  • AMPA receptors associated with TARP subunits enable the development of selective AMPA receptor drugs. Here, the authors provide cryo-EM structures of receptors bound to three TARP-γ8 selective drugs, and reveal bifunctionality of one ligand.

    • Danyang Zhang
    • Remigijus Lape
    • Ingo H. Greger
    ResearchOpen Access
    Nature Communications
    Volume: 14, P: 1-13
  • A combination of gentle stimulated emission depletion microscopy imaging and deep-learning-based improvements in signal-to-noise ratio enables high-resolution reconstruction of neuronal architecture in living tissue.

    • Philipp Velicky
    • Eder Miguel
    • Johann G. Danzl
    ResearchOpen Access
    Nature Methods
    Volume: 20, P: 1256-1265
  • AMPA glutamate receptors, mediate the majority of excitatory signaling in the brain. Here the authors show how the auxiliary subunit TARP-γ8 shapes gating kinetics, ion conductance and rectification properties of the heteromeric GluA1/2 AMPA receptor.

    • Beatriz Herguedas
    • Bianka K. Kohegyi
    • Ingo H. Greger
    ResearchOpen Access
    Nature Communications
    Volume: 13, P: 1-12
  • An analysis of 780 breast cancer genomes shows that focal amplifications are frequently preceded by dicentric chromosome formation from inter-chromosomal translocations associated with oestrogen receptor binding, which leads to chromosome bridge formation and breakage, initiating the amplification process.

    • Jake June-Koo Lee
    • Youngsook Lucy Jung
    • Peter J. Park
    ResearchOpen Access
    Nature
    Volume: 618, P: 1024-1032
  • A genome-wide association study of critically ill patients with COVID-19 identifies genetic signals that relate to important host antiviral defence mechanisms and mediators of inflammatory organ damage that may be targeted by repurposing drug treatments.

    • Erola Pairo-Castineira
    • Sara Clohisey
    • J. Kenneth Baillie
    Research
    Nature
    Volume: 591, P: 92-98
  • Under strong excitation, inhomogeneously broadened solid-state emitters coupled with high cooperativity to a cavity demonstrate collectively induced transparency and dissipative many-body dynamics, resulting from cavity–ion coupling.

    • Mi Lei
    • Rikuto Fukumori
    • Andrei Faraon
    Research
    Nature
    Volume: 617, P: 271-276
  • In this DREAM challenge, 75 methods for the identification of disease-relevant modules from molecular networks are compared and validated with GWAS data. The authors provide practical guidelines for users and establish benchmarks for network analysis.

    • Sarvenaz Choobdar
    • Mehmet E. Ahsen
    • Daniel Marbach
    ResearchOpen Access
    Nature Methods
    Volume: 16, P: 843-852
  • Via spin-exchange interactions with 51V5+ ions, an optically addressed 171Yb3+ qubit in a nuclear-spin-rich yttrium orthovanadate crystal is used to implement a reproducible nuclear-spin-based quantum memory, and entangled Yb–V Bell states are demonstrated.

    • Andrei Ruskuc
    • Chun-Ju Wu
    • Andrei Faraon
    Research
    Nature
    Volume: 602, P: 408-413
  • Biological organic-inorganic materials, such as self-assembling metal-reinforced mussel holdfast threads, remain a popular source of inspiration for materials design and engineering. Here the authors show that metal-coordinate polymer networks can be utilized as simple composite scaffolds for direct in situ crosslink mineralization.

    • Sungjin Kim
    • Abigail U. Regitsky
    • Niels Holten-Andersen
    ResearchOpen Access
    Nature Communications
    Volume: 12, P: 1-10
  • 1000 Genomes imputation can increase the power of genome-wide association studies to detect genetic variants associated with human traits and diseases. Here, the authors develop a method to integrate and analyse low-coverage sequence data and SNP array data, and show that it improves imputation performance.

    • Olivier Delaneau
    • Jonathan Marchini
    • Leena Peltonenz
    Research
    Nature Communications
    Volume: 5, P: 1-9
  • Results for the final phase of the 1000 Genomes Project are presented including whole-genome sequencing, targeted exome sequencing, and genotyping on high-density SNP arrays for 2,504 individuals across 26 populations, providing a global reference data set to support biomedical genetics.

    • Adam Auton
    • Gonçalo R. Abecasis
    • Gonçalo R. Abecasis
    ResearchOpen Access
    Nature
    Volume: 526, P: 68-74
  • The authors present a CRISPR-library-based approach for highly efficient and precise genome-wide variant engineering. They examine the functional consequences of premature termination codons within all annotated essential genes in yeast.

    • Meru J. Sadhu
    • Joshua S. Bloom
    • Leonid Kruglyak
    Research
    Nature Genetics
    Volume: 50, P: 510-514
  • Interferon-inducible transmembrane (IFITM) protein 3 is shown to be an innate defence mechanism against viral infection in vivo; furthermore, a subset of the patients hospitalized during the H1N1 2009 pandemic carried a variant form of the IFITM3 gene.

    • Aaron R. Everitt
    • Simon Clare
    • Paul Kellam
    Research
    Nature
    Volume: 484, P: 519-523
  • To design new multiprotein systems, the authors describe how to combine natural metal-coordinating motifs and hydroxamic acid groups to direct metal-mediated assembly of polyhedral protein architectures and 3D crystalline protein frameworks.

    • Rohit H. Subramanian
    • Jie Zhu
    • F. Akif Tezcan
    Protocols
    Nature Protocols
    Volume: 16, P: 3264-3297
  • In an inter-laboratory study, the authors compare the accuracy and performance of three optical density calibration protocols (colloidal silica, serial dilution of silica microspheres, and colony-forming unit (CFU) assay). They demonstrate that serial dilution of silica microspheres is the best of these tested protocols, allowing precise and robust calibration that is easily assessed for quality control and can also evaluate the effective linear range of an instrument.

    • Jacob Beal
    • Natalie G. Farny
    • Jiajie Zhou
    ResearchOpen Access
    Communications Biology
    Volume: 3, P: 1-29