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Showing 51–100 of 292 results
Advanced filters: Author: Kevin Peter Hand Clear advanced filters
  • Bilateral vestibular schwannomas (VS) are the main feature of NF2-related schwannomatosis, but the immunological landscape of VS is poorly understood. By performing imaging mass cytometry, the authors assess the cellular heterogeneity in VS tumours and reveal niche-dependent modes of T-cell regulation in these neoplasms.

    • Adam P. Jones
    • Michael J. Haley
    • Kevin N. Couper
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-18
  • The endosomal retrieval subdomain organizes recycling of endocytosed proteins. Here, using proximity proteomics, the authors reveal that this recycling subdomain regulates switching of specific RAB GTPases, a feature likely important in neuroprotection.

    • Carlos Antón-Plágaro
    • Kai-en Chen
    • Peter J. Cullen
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-23
  • The role of cationic intermediates in the benzylidene-directed synthesis of 1,2-cis glycosidic linkages is unclear. Now cryogenic infrared spectroscopy provides insight into the SN1 mechanism of benzylidene-directed glycosylation reactions. The analysis reveals that cationic intermediates form anhydro cations through a two-step process, which correlates with the observed stereochemical outcome.

    • Chun-Wei Chang
    • Kim Greis
    • Kevin Pagel
    ResearchOpen Access
    Nature Synthesis
    Volume: 3, P: 1377-1384
  • The identification of T cell epitopes is a critical step in understanding the immune response to infection and in designing vaccine based approaches. Here the authors introduce a frame work of antigen discovery called MHCvalidator and Epitrack to identify new antigenic features for T-cell COVID-19 vaccines and characterise a novel non-canonical epitope from a truncated Spike variant and mutation of an immunodominant epitope in the BNT162b4 vaccine.

    • Kevin A. Kovalchik
    • David J. Hamelin
    • Etienne Caron
    ResearchOpen Access
    Nature Communications
    Volume: 15, P: 1-22
  • A genome-wide association study and Metabochip meta-analysis of body mass index (BMI) detects 97 BMI-associated loci, of which 56 were novel, and many loci have effects on other metabolic phenotypes; pathway analyses implicate the central nervous system in obesity susceptibility and new pathways such as those related to synaptic function, energy metabolism, lipid biology and adipogenesis.

    • Adam E. Locke
    • Bratati Kahali
    • Elizabeth K. Speliotes
    Research
    Nature
    Volume: 518, P: 197-206
  • A trans-ancestry genome-wide association study of serum urate levels identifies 183 loci influencing this trait. Enrichment analyses, fine-mapping and colocalization with gene expression in 47 tissues implicate the kidney and liver as key target organs and prioritize potential causal genes.

    • Adrienne Tin
    • Jonathan Marten
    • Anna Köttgen
    Research
    Nature Genetics
    Volume: 51, P: 1459-1474
  • A multidimensional proteomics analysis of the interactions between around 2,000 nuclear proteins and over 80 modified dinucleosomes representing promoter, enhancer and heterochromatin states provides insights into how chromatin states are decoded by chromatin readers.

    • Saulius Lukauskas
    • Andrey Tvardovskiy
    • Till Bartke
    ResearchOpen Access
    Nature
    Volume: 627, P: 671-679
  • Traumatic brain injury is associated with changes to the metabolome. Here the authors show that acute traumatic brain injury has distinctive serum metabolic patterns which may suggest protective changes of systemic lipid metabolism aiming to maintain lipid homeostasis in the brain.

    • Ilias Thomas
    • Alex M. Dickens
    • Tommaso Zoerle
    ResearchOpen Access
    Nature Communications
    Volume: 13, P: 1-15
  • Whereas the toxic effects of ethanol are well-documented, the underlying mechanism is obscure. This study uses the eukaryotic model S. cerevisiae to reveal how exposure to sublethal ethanol concentrations causes DNA replication stress and an increased mutation rate.

    • Karin Voordeckers
    • Camilla Colding
    • Kevin J. Verstrepen
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-16
  • Ballistic delivery with micro/nano-particles has been successfully used to transfect plant cells, however, has failed in mammalian cells due to toxic effects. Here, the authors report on a self-assembled nano-ballistic delivery system for the delivery of functional macromolecules and demonstrate efficient transfection of mammalian cells.

    • Juan C. Fraire
    • Elnaz Shaabani
    • Kevin Braeckmans
    ResearchOpen Access
    Nature Communications
    Volume: 13, P: 1-16
  • A diverse, multidisciplinary panel of 386 experts in COVID-19 response from 112 countries provides health and social policy actions to address inadequacies in the pandemic response and help to bring this public health threat to an end.

    • Jeffrey V. Lazarus
    • Diana Romero
    • Anne Øvrehus
    ResearchOpen Access
    Nature
    Volume: 611, P: 332-345
  • Solid organ transplant recipients are at increased risk of infectious disease and have unique molecular pathophysiology. Here the authors use host-microbe profiling to assess SARS-CoV-2 infection and immunity in solid organ transplant recipients, showing enhanced viral abundance, impaired clearance, and increased expression of innate immunity genes.

    • Harry Pickering
    • Joanna Schaenman
    • Charles R. Langelier
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-16
  • The adenosine A2A receptor (A2AR) plays a crucial role in regulating inflammation and metabolism, yet the extent to which endogenous metabolites modulate its activity remains unclear. Here, the authors utilized the MIDAS platform to identify metabolites interacting with A2AR, revealing orthosteric and allosteric modulators.

    • Prashant Rao
    • Manoj Rathinaswamy
    • Qi Hao
    ResearchOpen Access
    Communications Chemistry
    Volume: 9, P: 1-13
  • The dayside thermal emission spectrum and brightness temperature map of the ultra-hot Jupiter WASP-18b obtained from the NIRISS instrument on the JWST showed water emission features, an atmosphere consistent with solar metallicity, as well as a steep and symmetrical decrease in temperature towards the nightside.

    • Louis-Philippe Coulombe
    • Björn Benneke
    • Peter J. Wheatley
    ResearchOpen Access
    Nature
    Volume: 620, P: 292-298
  • The RNA-binding ubiquitin E3 ligase TRIM25 plays a critical role in antiviral immunity. Here the authors identify key RNA-binding residues of TRIM25, link RNA binding to antiviral activity, reveal RNA structural and sequence preferences, and investigate binding to the viral genome.

    • Lucía Álvarez
    • Kevin Haubrich
    • Janosch Hennig
    ResearchOpen Access
    Nature Communications
    Volume: 15, P: 1-15
  • High-throughput automated synthesis is used to investigate the crystallization behaviour of two-dimensional (2D) halide perovskites (HPs) based on a bulky ligand cation, 3,3-diphenylpropylammonium. The solution-processed 2D HP flakes realize a moiré superlattice, indicating the formation of a twisted 2D stack via self-assembly action.

    • Jonghee Yang
    • Addis S. Fuhr
    • Mahshid Ahmadi
    Research
    Nature Synthesis
    Volume: 4, P: 1068-1077
  • Comparison of genome-wide association studies of HTT CAG repeat expansion in blood to expansion-driven clinical traits in Huntington’s disease identifies shared and distinct modifiers implicating DNA mismatch repair with tissue and cell-type specificity.

    • Jong-Min Lee
    • Zachariah L. McLean
    • Richard H. Myers
    Research
    Nature Genetics
    Volume: 57, P: 1426-1436
  • Oncofetal (OnF) reprogramming, driven by YAP and AP-1, induces phenotypic plasticity and therapy resistance in WNT-dependent colorectal cancer (CRC). Targeting the OnF state in combination with chemotherapy substantially attenuates tumor growth in mouse models and patient-derived CRC tumoroids.

    • Slim Mzoughi
    • Megan Schwarz
    • Ernesto Guccione
    ResearchOpen Access
    Nature Genetics
    Volume: 57, P: 402-412
  • The epigenetic changes underlying the heterogeneity of RA disease presentation have been the subject of intense scrutiny. In this study, the authors use multiple single-cell sequencing datasets to define ‘chromatin superstates’ in patients with RA, which associate with distinct transcription factors and disease phenotypes.

    • Kathryn Weinand
    • Saori Sakaue
    • Soumya Raychaudhuri
    ResearchOpen Access
    Nature Communications
    Volume: 15, P: 1-25
  • In vitro modelling of the adipose tissue-liver axis can advance understanding and therapy of metabolic disease, including by distinguishing effects of obesity and inflammation. Here, authors develop such a system based on isogenic human iPSCs and interconnected microphysiological devices.

    • Lin Qi
    • Marko Groeger
    • Andreas Stahl
    ResearchOpen Access
    Nature Communications
    Volume: 15, P: 1-12
  • The protein PICALM/CALM is implicated in Alzheimer’s disease (AD) pathology, but it is unclear how. In this study, the authors show that CALM regulates clearance of the protein tau, which is also implicated in AD pathology, by facilitating endocytosis-dependent autophagy.

    • Kevin Moreau
    • Angeleen Fleming
    • David C. Rubinsztein
    ResearchOpen Access
    Nature Communications
    Volume: 5, P: 1-20
  • The complexity of fabricating and operating microfluidic devices limits their use. Walsh et al. describe a method in which circuits are printed as quickly and simply as writing with a pen, and liquids in them are confined by fluid instead of solid walls.

    • Edmond J. Walsh
    • Alexander Feuerborn
    • Peter R. Cook
    ResearchOpen Access
    Nature Communications
    Volume: 8, P: 1-9
  • A study demonstrates that sustained membrane blebs in cancer cells recruit curvature-sensing septins that form plasma membrane-proximal signalling hubs that promote cancer cell survival.

    • Andrew D. Weems
    • Erik S. Welf
    • Gaudenz Danuser
    Research
    Nature
    Volume: 615, P: 517-525
  • It remains unclear whether exotic and native species are functionally different. Using a global grassland experiment, Seabloomet al. show that native and exotic species respond differently to two globally pervasive environmental changes, addition of mineral nutrients and alteration of herbivore density.

    • Eric W. Seabloom
    • Elizabeth T. Borer
    • Louie Yang
    ResearchOpen Access
    Nature Communications
    Volume: 6, P: 1-8
  • The role of IgG glycosylation in the immune response has been studied, but less is known about IgM glycosylation. Here the authors characterize glycosylation of SARS-CoV-2 spike specific IgM and show that it correlates with COVID-19 severity and affects complement deposition.

    • Benjamin S. Haslund-Gourley
    • Kyra Woloszczuk
    • Mary Ann Comunale
    ResearchOpen Access
    Nature Communications
    Volume: 15, P: 1-19
  • Nasopharyngeal cancer is frequently characterized by Epstein-Barr virus infection. Here, using genomic analyses, the authors find that the tumours harbour mutations in genes involved in the NF-κB signalling pathway or overexpress a viral oncoprotein, latent membrane protein 1.

    • Yvonne Y Li
    • Grace T. Y. Chung
    • Kwok-Wai Lo
    ResearchOpen Access
    Nature Communications
    Volume: 8, P: 1-10
  • A primordial carbon-to-oxygen ratio (C/O) greater than 0.8 in an exoplanet causes a carbide-dominated interior, as opposed to the silicate-dominated composition found on Earth; the atmospheres also can differ from those in the Solar System. The solar C/O is 0.54. This study reports an analysis of spectra from the transiting hot Jupiter WASP-12b that reveals that C/O>1 in its atmosphere, based upon the observed concentrations of the prominent molecules CO, CH4 and H2O.

    • Nikku Madhusudhan
    • Joseph Harrington
    • Richard G. West
    Research
    Nature
    Volume: 469, P: 64-67
  • Stable sub-cycle pulses in the mid-infrared region allow damage-free investigation of electron dynamics in solids. Here, the authors develop a suitable source to this end which is based on an optical parametric amplifier.

    • Houkun Liang
    • Peter Krogen
    • Kyung-Han Hong
    ResearchOpen Access
    Nature Communications
    Volume: 8, P: 1-9
  • Haematopoiesis has high clonal diversity up to about 65 years of age, after which diversity drops precipitously owing to positive selection acting on a handful of clones that expand exponentially throughout adulthood.

    • Emily Mitchell
    • Michael Spencer Chapman
    • Peter J. Campbell
    ResearchOpen Access
    Nature
    Volume: 606, P: 343-350
  • A millihertz frequency X-ray quasi-periodic oscillation has been observed near the innermost orbit of an actively accreting supermassive black hole and its frequency has evolved significantly over 2 years, a phenomenon that is difficult to explain with existing models.

    • Megan Masterson
    • Erin Kara
    • Jingyi Wang
    Research
    Nature
    Volume: 638, P: 370-375
  • Targeted protein degradation uses small molecules to recruit proteins to E3 ligases to induce their ubiquitylation and degradation, but only a few human E3 ligases are amenable to this strategy. Here, the authors identify and characterize SP3N, a specific degrader of the prolyl isomerase FKBP12, containing an FKBP12 ligand appended with a flexible alkylamine tail that is metabolized to an active aldehyde species which recruits the SCFFBXO22 ligase for FKBP12 degradation.

    • Chrysanthi Kagiou
    • Jose A. Cisneros
    • Georg E. Winter
    ResearchOpen Access
    Nature Communications
    Volume: 15, P: 1-14
  • Experimental assays are used to determine if compounds cause a desired activity in cells. Here the authors demonstrate that computational methods can predict compound bioactivity given their chemical structure, imaging and gene expression data from historic screening libraries.

    • Nikita Moshkov
    • Tim Becker
    • Juan C. Caicedo
    ResearchOpen Access
    Nature Communications
    Volume: 14, P: 1-11