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Showing 1–50 of 96 results
Advanced filters: Author: Ryan Crawford Clear advanced filters
  • From 2014–2017, marine heatwaves caused global mass coral bleaching, where the corals lose their symbiotic algae. The authors find, this event exceeded the severity of all prior global bleaching events in recorded history, with approximately half the world’s reefs bleaching and 15% experiencing substantial mortality.

    • C. Mark Eakin
    • Scott F. Heron
    • Derek P. Manzello
    ResearchOpen Access
    Nature Communications
    Volume: 17, P: 1-14
  • The authors previously pinpointed OLAH (oleoyl-ACP-hydrolase) as a driver of life-threatening viral diseases. Here, the authors identify increased IL-18Rα expression on CD8+ T cells, which acquire a reduced cytotoxic signature, correlates with severe respiratory viral infection of influenza A virus, RSV and COVID-19.

    • Aira F. Cabug
    • Jeremy Chase Crawford
    • Katherine Kedzierska
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-19
  • Together with a companion paper, molecular details of immune responses in a pig-to-human xenotransplantation are identified through dense longitudinal multi-omics profiling of the xenograft and the host recipient, across the 61-day procedure.

    • Eloi Schmauch
    • Brian D. Piening
    • Brendan J. Keating
    Research
    Nature
    Volume: 650, P: 205-217
  • Surgical nerve injuries can cause significant morbidity, yet no approved fluorescent agents exist for visualization. Here, the authors show in a Phase I multi-site trial that bevonescein was safe, established optimal dosing and timing, and provided a fluorescence signal for intraoperative nerve identification.

    • Yu-Jin Lee
    • Ryan K. Orosco
    • Eben L. Rosenthal
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-12
  • Polygenic risk scores can help identify individuals at higher risk of type 2 diabetes. Here, the authors characterise a multi-ancestry score across nearly 900,000 people, showing that its predictive value depends on demographic and clinical context and extends to related traits and complications.

    • Boya Guo
    • Yanwei Cai
    • Burcu F. Darst
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-16
  • A pangenome of the Cannabis genus including 193 genomes demonstrates high variability in most of the genome but low diversity in cannabinoid synthesis genes and provides a resource for future genetic studies and crop optimization.

    • Ryan C. Lynch
    • Lillian K. Padgitt-Cobb
    • Todd P. Michael
    ResearchOpen Access
    Nature
    Volume: 643, P: 1001-1010
  • Fears about the future impacts of artificial intelligence are distracting researchers from the real risks of deployed systems, argue Kate Crawford and Ryan Calo.

    • Kate Crawford
    • Ryan Calo
    Comments & Opinion
    Nature
    Volume: 538, P: 311-313
  • Dimethyl fumarate (DMF) is an anti-inflammatory drug proposed as a treatment for COVID19. Here the results are reported from a randomised trial testing DMF treatment in 713 patients hospitalised with COVID-19. DMF was not associated with any improvement in day 5 outcomes.

    • Peter Sandercock
    • Janet Darbyshire
    • Martin J. Landray
    ResearchOpen Access
    Nature Communications
    Volume: 15, P: 1-13
  • Tracking data from 17 marine predator species in the Southern Ocean are used to identify Areas of Ecological Significance, the protection of which could help to mitigate increasing pressures on Southern Ocean ecosystems.

    • Mark A. Hindell
    • Ryan R. Reisinger
    • Ben Raymond
    Research
    Nature
    Volume: 580, P: 87-92
  • While intellectual virtues might be more within the remit of philosophers, many scientists would also see them as important within their domain. Dominic T. Chaloner, Michelle Francl, and T. Ryan Byerly consider what it takes to train up virtuous chemists

    • Dominic T. Chaloner
    • Michelle Francl
    • T. Ryan Byerly
    Comments & Opinion
    Nature Chemistry
    Volume: 17, P: 1139-1141
  • Antibodies directed against citrullinated proteins are commonly found in patients with rheumatoid arthritis. Here, the authors show that citrullination alters the peptide repertoire presented to T cells by altering protease cleavage and inducing protein destabilization, thereby exposing cryptic epitopes.

    • Ashley M. Curran
    • Alexander A. Girgis
    • Erika Darrah
    ResearchOpen Access
    Nature Communications
    Volume: 14, P: 1-17
  • Mark McCarthy and colleagues identify twelve new risk loci for type 2 diabetes through a large-scale genome-wide association and replication study in individuals of European ancestry. The identified loci affect both beta-cell function and insulin action and are enriched for genes involved in cell cycle regulation.

    • Benjamin F Voight
    • Laura J Scott
    • Mark I McCarthy
    Research
    Nature Genetics
    Volume: 42, P: 579-589
  • Cas Simons, Ryan Taft and colleagues report the identification of KCNH1 mutations in six individuals with Temple-Baraitser syndrome (TBS). Electrophysiological measurements of cells expressing mutant KCNH1 channels show decreased activation thresholds and slower deactivation in comparison to wild-type channels, suggesting that these mutations lead to gain of function of KCNH1.

    • Cas Simons
    • Lachlan D Rash
    • Ryan J Taft
    Research
    Nature Genetics
    Volume: 47, P: 73-77
  • GIANT, a genetically informed brain atlas, integrates genetic heritability with neuroanatomy. It shows strong neuroanatomical validity and surpasses traditional atlases in discovery power for brain imaging genomics.

    • Jingxuan Bao
    • Junhao Wen
    • Li Shen
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-18
  • This overview of the ENCODE project outlines the data accumulated so far, revealing that 80% of the human genome now has at least one biochemical function assigned to it; the newly identified functional elements should aid the interpretation of results of genome-wide association studies, as many correspond to sites of association with human disease.

    • Ian Dunham
    • Anshul Kundaje
    • Ewan Birney
    ResearchOpen Access
    Nature
    Volume: 489, P: 57-74
  • Chronic infection with SARS-CoV-2 leads to the emergence of viral variants that show reduced susceptibility to neutralizing antibodies in an immunosuppressed individual treated with convalescent plasma.

    • Steven A. Kemp
    • Dami A. Collier
    • Ravindra K. Gupta
    Research
    Nature
    Volume: 592, P: 277-282
  • Sera from vaccinated individuals and some monoclonal antibodies show a modest reduction in neutralizing activity against the B.1.1.7 variant of SARS-CoV-2; but the E484K substitution leads to a considerable loss of neutralizing activity.

    • Dami A. Collier
    • Anna De Marco
    • Ravindra K. Gupta
    Research
    Nature
    Volume: 593, P: 136-141
  • More than 90% of genetic variants associated with type 2 diabetes occur in non-coding regions. Scott et al. report genomes, epigenomes and transcriptomes of skeletal muscle from 271 participants with a range of glucose tolerances, revealing a genetic regulatory architecture enriched in muscle stretch/super enhancers.

    • Laura J. Scott
    • Michael R. Erdos
    • Stephen C. J. Parker
    ResearchOpen Access
    Nature Communications
    Volume: 7, P: 1-12
  • Meredith Yeager and colleagues with the Cancer Genetics Markers of Susceptibility (CGEMS) initiative report a new association to prostate cancer at chromosome 8q24. This defines a new locus, region 4, which shows association to prostate cancer susceptibility independent of previously reported associations at 8q24.

    • Meredith Yeager
    • Nilanjan Chatterjee
    • Stephen J Chanock
    Research
    Nature Genetics
    Volume: 41, P: 1055-1057
  • Whole-exome sequencing in a large autism study identifies over 100 autosomal genes that are likely to affect risk for the disorder; these genes, which show unusual evolutionary constraint against mutations, carry de novo loss-of-function mutations in over 5% of autistic subjects and many function in synaptic, transcriptional and chromatin-remodelling pathways.

    • Silvia De Rubeis
    • Xin He
    • Joseph D. Buxbaum
    Research
    Nature
    Volume: 515, P: 209-215
  • Deficiency in NAD+ has been implicated in skeletal deformities during development in both humans and mice. Here, the authors use mice that lack the critical enzyme of the NAD+ salvage pathway Nampt in mesenchymal lineage cells to show that the NAD salvage pathway is indispensable for endochondral but not intramembranous bone development.

    • Aaron Warren
    • Ryan M. Porter
    • Maria Almeida
    ResearchOpen Access
    Nature Communications
    Volume: 14, P: 1-17
  • A genome-wide association study including over 76,000 individuals with schizophrenia and over 243,000 control individuals identifies common variant associations at 287 genomic loci, and further fine-mapping analyses highlight the importance of genes involved in synaptic processes.

    • Vassily Trubetskoy
    • Antonio F. Pardiñas
    • Jim van Os
    Research
    Nature
    Volume: 604, P: 502-508
  • Patient variables, such as comorbidities, partially explain which patients will progress to Klebsiella infection, with colonization of the gut acting as a reservoir. Little is known, however, regarding Klebsiella genes that may increase risk of disease in colonized individuals. Here, authors conduct a comparative genomics study to identify genes associated with progression from colonisation to infection.

    • Jay Vornhagen
    • Emily K. Roberts
    • Michael A. Bachman
    ResearchOpen Access
    Nature Communications
    Volume: 13, P: 1-15
  • The Omicron variant evades vaccine-induced neutralization but also fails to form syncytia, shows reduced replication in human lung cells and preferentially uses a TMPRSS2-independent cell entry pathway, which may contribute to enhanced replication in cells of the upper airway. Altered fusion and cell entry characteristics are linked to distinct regions of the Omicron spike protein.

    • Brian J. Willett
    • Joe Grove
    • Emma C. Thomson
    ResearchOpen Access
    Nature Microbiology
    Volume: 7, P: 1161-1179
  • A study of the evolution of the SARS-CoV-2 virus in England between September 2020 and June 2021 finds that interventions capable of containing previous variants were insufficient to stop the more transmissible Alpha and Delta variants.

    • Harald S. Vöhringer
    • Theo Sanderson
    • Moritz Gerstung
    ResearchOpen Access
    Nature
    Volume: 600, P: 506-511
  • Over one hundred loci have been identified to be associated with the familial risk of prostate cancer but the functional effects are poorly understood. Here the authors use single-nucleotide variant and epigentic data to show an underlying genetic architecture marked by histone modification.

    • Alexander Gusev
    • Huwenbo Shi
    • Bogdan Pasaniuc
    ResearchOpen Access
    Nature Communications
    Volume: 7, P: 1-13
  • Post-international travel quarantine has been widely implemented to mitigate SARS-CoV-2 transmission, but the impacts of such policies are unclear. Here, the authors used linked genomic and contact tracing data to assess the impacts of a 14-day quarantine on return to England in summer 2020.

    • Dinesh Aggarwal
    • Andrew J. Page
    • Ewan M. Harrison
    ResearchOpen Access
    Nature Communications
    Volume: 13, P: 1-13
  • In this study, Aggarwal and colleagues perform prospective sequencing of SARS-CoV-2 isolates derived from asymptomatic student screening and symptomatic testing of students and staff at the University of Cambridge. They identify important factors that contributed to within university transmission and onward spread into the wider community.

    • Dinesh Aggarwal
    • Ben Warne
    • Ian G. Goodfellow
    ResearchOpen Access
    Nature Communications
    Volume: 13, P: 1-16
  • The medial olivocochlear efferent reflex regulates cochlear outer hair cell-based amplification of sound energy. Here the authors show this dynamic control of hearing sensitivity is driven by sensory input from the outer hair cells and their type II spiral ganglion neuron innervation.

    • Kristina E. Froud
    • Ann Chi Yan Wong
    • Gary D. Housley
    ResearchOpen Access
    Nature Communications
    Volume: 6, P: 1-9
  • He et al. develop a network-based metric of amyloid-β burden by integrating individualized brain connectomes with amyloid-PET imaging. This approach improves prediction of future cognitive decline in older adults and may support earlier identification of individuals at risk of dementia.

    • Hengda He
    • Qolamreza R. Razlighi
    • Nina Silverberg
    ResearchOpen Access
    Communications Medicine
    Volume: 5, P: 1-18
  • Dependency of diverse cancers on specific BCL-2 family members and their combinations is unknown. Here they perform drug screening and find most cell lines to be dependent on at least one combination of BCL-2 family members, and using a CRISPR screen find BCL-w and BFL-1 to mediate resistance to BH3 mimetics

    • Ryan S. Soderquist
    • Lorin Crawford
    • Kris C. Wood
    ResearchOpen Access
    Nature Communications
    Volume: 9, P: 1-13
  • Failing to account for emission differences between day and night will lead to an underestimate of global CO2 emissions from rivers by up to 0.55 PgC yr–1, according to analyses of high-frequency CO2 measurements.

    • Lluís Gómez-Gener
    • Gerard Rocher-Ros
    • Ryan A. Sponseller
    Research
    Nature Geoscience
    Volume: 14, P: 289-294
  • Structural variants (SVs) contribute to the genetic architecture of many brain-related disorders. Here, the authors integrate SV calls from genome sequencing (n = 755) with RNA-seq data (n = 629) from post-mortem dorsal lateral prefrontal cortex to annotate the gene regulatory effects of SVs in the human brain and their potential to contribute to disease.

    • Lide Han
    • Xuefang Zhao
    • Douglas M. Ruderfer
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-13
  • Immobilization of radionuclides in glass or ceramic forms in stainless steel in deep geological repositories is planned in the US for disposal of nuclear waste. Under simulated repository conditions, corrosion could be significantly accelerated at the interfaces of different barrier materials.

    • Xiaolei Guo
    • Stephane Gin
    • Gerald S. Frankel
    Research
    Nature Materials
    Volume: 19, P: 310-316
  • The development of highly effective Earth-abundant catalysts for C(sp2)-N cross-coupling represents an on-going challenge in synthetic chemistry. Here, the authors report a nickel complex containing a bisphosphine ancillary ligand allowing room-temperature couplings of amines and ammonia with a range of electrophiles.

    • Christopher M. Lavoie
    • Preston M. MacQueen
    • Mark Stradiotto
    ResearchOpen Access
    Nature Communications
    Volume: 7, P: 1-11
  • Jones et al. examine the generalizability of the valence–dominance model of social judgements of faces in 41 countries across 11 world regions. They find evidence of both generalizability and variation, depending on the analytical method.

    • Benedict C. Jones
    • Lisa M. DeBruine
    • Nicholas A. Coles
    Research
    Nature Human Behaviour
    Volume: 5, P: 159-169