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Showing 51–100 of 4186 results
Advanced filters: Author: T. Yu Clear advanced filters
  • Hydrogen sulfide (H2S) reversibly modifies low molecular weight and protein thiols to form persulfides (RSS) and polysulfides (RS(S)nS) for antioxidant defence and regulation of activity. Here, the authors report a sensitive LC-MS/MS procedure that separately traps and quantifies the sulfur atom of H2S, the terminal sulfur atom of RSS and RS(S)nS-, and the internal sulfur atoms of RS(S)nS as diagnostic products in biological samples.

    • Jan Lj. Miljkovic
    • Nils Burger
    • Michael P. Murphy
    ResearchOpen Access
    Nature Communications
    Volume: 17, P: 1-19
  • Microglia can alter their properties to adopt a wide spectrum of cellular phenotypes. Here, the authors show that remodeling of microglial mitochondria accompanies microglial responses to challenges and aging, and provide evidence that these organelles play a role in regulating basal microglial morphology, gene expression, and inflammatory profile.

    • Katherine Espinoza
    • Ari W. Schaler
    • Lindsay M. De Biase
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-22
  • Somatic mutations in blood cells (CHIP) are linked to diseases like heart disease, but the mechanisms are unclear. Here, the authors show that different CHIP driver genes alter unique sets of plasma proteins, some of which are validated in mouse models.

    • Zhi Yu
    • Amélie Vromman
    • Pradeep Natarajan
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-17
  • Two-dimensional polyaramid polymers are synthesized to form nanofilms that exhibit the lowest gas permeability of any polymer by orders of magnitude, despite lacking crystallinity, enabling molecular-scale nanomechanical resonators and barrier materials.

    • Cody L. Ritt
    • Michelle Quien
    • Michael S. Strano
    ResearchOpen Access
    Nature
    Volume: 647, P: 383-389
  • Federated learning (FL) algorithms have emerged as a promising solution to train models for healthcare imaging across institutions while preserving privacy. Here, the authors describe the Federated Tumor Segmentation (FeTS) challenge for the decentralised benchmarking of FL algorithms and evaluation of Healthcare AI algorithm generalizability in real-world cancer imaging datasets.

    • Maximilian Zenk
    • Ujjwal Baid
    • Spyridon Bakas
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-20
  • The authors demonstrate a simple direct-current-measurement characterization of a quarter-wavelength superconducting coplanar waveguide resonator using an on-chip bolometer. This approach offers simpler experimental instrumentation and much larger frequency range of operation compared to traditional RF techniques.

    • Christoforus Dimas Satrya
    • Yu-Cheng Chang
    • Jukka P. Pekola
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-7
  • The combination of computational design, laboratory-based screening and biophysical validation enables the de novo generation of variable heavy-chain antibody fragments and antibodies that precisely target chosen disease-related molecules.

    • Nathaniel R. Bennett
    • Joseph L. Watson
    • David Baker
    ResearchOpen Access
    Nature
    Volume: 649, P: 183-193
  • Long COVID has heterogeneous presentation and clinical trajectories are not well defined. Here, the authors define trajectories using data from a prospective cohort study in the United States involving symptom questionnaires from acute infection up to 15 months.

    • Tanayott Thaweethai
    • Sarah E. Donohue
    • Bruce D. Levy
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-10
  • Edge localised modes (ELMs) in highly confined plasmas are notoriously difficult to regulate. Here, the authors analyse multiscale modes and interactions by combining experimental measurements from DIII-D and modeling, showing promising results in ELM control.

    • Zeyu Li
    • P. H. Diamond
    • M. E. Austin
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-11
  • Whole-genome sequencing data for 2,778 cancer samples from 2,658 unique donors across 38 cancer types is used to reconstruct the evolutionary history of cancer, revealing that driver mutations can precede diagnosis by several years to decades.

    • Moritz Gerstung
    • Clemency Jolly
    • Christian von Mering
    ResearchOpen Access
    Nature
    Volume: 578, P: 122-128
  • Mechanical relaxation processes in glasses can provide information on the structural and mechanical properties of glasses. Here, the authors observe a fast secondary relaxation process in La-based metallic glasses, providing information on the inelasticity of metallic glasses.

    • Q. Wang
    • S.T. Zhang
    • J. Lu
    ResearchOpen Access
    Nature Communications
    Volume: 6, P: 1-6
  • Real-time PRS-CS (rtPRS-CS) is a polygenic prediction method that can incorporate streaming data for updating single-nucleotide polymorphism weights in real time, thereby maximizing the prediction accuracy of polygenic risk scores over time across various traits.

    • Justin D. Tubbs
    • Yu Chen
    • Tian Ge
    Research
    Nature Genetics
    Volume: 57, P: 2863-2871
  • Wang, Tang and colleagues develop the low-signal signed iterative random forest pipeline to investigate epistasis in the genetic control of cardiac hypertrophy, identifying epistatic variants near CCDC141, IGF1R, TTN and TNKS loci, and show that hypertrophy in induced pluripotent stem cell-derived cardiomyocytes is nonadditively influenced by interactions among CCDC141, TTN and IGF1R.

    • Qianru Wang
    • Tiffany M. Tang
    • Euan A. Ashley
    ResearchOpen Access
    Nature Cardiovascular Research
    Volume: 4, P: 740-760
  • Boccella, Yu and colleagues reveal that the transmembrane protein ANTXR1 regulates post-infarction fibrotic remodeling, and its inhibition blocks collagen turnover and improves heart function.

    • Nicola Boccella
    • GuoJun Yu
    • Brad St. Croix
    ResearchOpen Access
    Nature Cardiovascular Research
    Volume: 4, P: 1521-1538
  • The role of the complement system (CS) - part of the immune system - in pancreatic ductal adenocarcinoma (PDAC) remains underexplored. Here, the authors evaluate the association of genetic variants in CS-related genes with PDAC risk, and explore their potential role in prognosis and immune infiltration.

    • Alberto Langtry
    • Raul Rabadan
    • Linda Sharp
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-12
  • Data obtained from the MicroBooNE liquid-argon time projection chamber are used to exclude the single light sterile neutrino interpretation of the LSND and MiniBooNE anomalies at the 95% confidence level.

    • P. Abratenko
    • D. Andrade Aldana
    • C. Zhang
    ResearchOpen Access
    Nature
    Volume: 648, P: 64-69
  • Integrated optical frequency combs are powerful tools for optical spectroscopy. Here, authors demonstrate low-power, detectable-rate soliton microcombs from telecom to visible bands, including wavelength-multiplexed operation, using ultra-low-loss silicon nitride waveguides.

    • Peng Liu
    • Qing-Xin Ji
    • Kerry J. Vahala
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-6
  • The authors present SVclone, a computational method for inferring the cancer cell fraction of structural variants from whole-genome sequencing data.

    • Marek Cmero
    • Ke Yuan
    • Christian von Mering
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-15
  • A new artificial intelligence model, DeepSeek-R1, is introduced, demonstrating that the reasoning abilities of large language models can be incentivized through pure reinforcement learning, removing the need for human-annotated demonstrations.

    • Daya Guo
    • Dejian Yang
    • Zhen Zhang
    ResearchOpen Access
    Nature
    Volume: 645, P: 633-638
  • The phenomenon of wave mixing is expected to show peculiar features when scaled down to the quantum level. Here, the authors show how coherent electromagnetic waves propagating in a 1D transmission line with an embedded two-level artificial atom are mapped into a quantised spectrum of narrow peaks.

    • A. Yu. Dmitriev
    • R. Shaikhaidarov
    • O. V. Astafiev
    ResearchOpen Access
    Nature Communications
    Volume: 8, P: 1-6
  • Current-induced motion of magnetic nanostructures, such as skyrmions or domain walls, is envisioned as a promising scalable technology for information storage. Yuet al.demonstrate near-room-temperature motion of skyrmions with current densities orders of magnitude lower than previously reported in domain walls.

    • X.Z. Yu
    • N. Kanazawa
    • Y. Tokura
    Research
    Nature Communications
    Volume: 3, P: 1-6
  • The role of individual lipid species in Alzheimer’s disease (AD) is not fully understood. Here, the authors performed global lipidomics on post-mortem dorsolateral prefrontal cortex collected from 316 participants in the ROSMAP cohort including asymptomatic and symptomatic AD.

    • Chih-Yu Chen
    • Kristal Maner-Smith
    • Eric A. Ortlund
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-17
  • The magnetic flux rope is a crucial structure in astrophysical and space plasmas. Here, the authors show how this structure rapidly contracts/expands and consequently how it accelerates/decelerates electrons, by using an advanced analysis technique.

    • H. S. Fu
    • W. Z. Zhang
    • J. L. Burch
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-11
  • The transcription factor COUP-TFII plays a critical role in regulating endothelial cell (EC) identity. Here the authors report that the ectopic expression of COUP-TFII in endothelial cells induces molecular programs of post-capillary venules in tumor EC, associated with enhanced recruitment of anti-tumour T cells, inhibition of tumour growth, and sensitized responses to immune checkpoint blockade and adoptive T cell transfer therapies.

    • Yu Zhu
    • Kevin F. Brulois
    • Eugene C. Butcher
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-15
  • Distinguishing glioblastoma and primary central nervous system lymphoma (PCNSL) remains challenging due to their overlapping pathology features. Here, the authors develop a computational tool, PICTURE, for differentiating similar pathological features enabling improved diagnosis of CNS tumours.

    • Junhan Zhao
    • Shih-Yen Lin
    • Kun-Hsing Yu
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-16
  • Entanglement was observed in top–antitop quark events by the ATLAS experiment produced at the Large Hadron Collider at CERN using a proton–proton collision dataset with a centre-of-mass energy of √s  = 13 TeV and an integrated luminosity of 140 fb−1.

    • G. Aad
    • B. Abbott
    • L. Zwalinski
    ResearchOpen Access
    Nature
    Volume: 633, P: 542-547
  • Trained and validated on multimodal data from 14.5 million images from multicountry datasets, a foundation model is shown to increase diagnostic and referral accuracy of clinicians when used as an assistant in a trial involving 16 ophthalmologists and 668 patients.

    • Yilan Wu
    • Bo Qian
    • Bin Sheng
    Research
    Nature Medicine
    Volume: 31, P: 3404-3413
  • A mass spectrometry-based approach globally identifies protein regulators of metabolism and reveals the role of LRRC58 in controlling cysteine catabolism.

    • Haopeng Xiao
    • Martha Ordonez
    • Edward T. Chouchani
    ResearchOpen Access
    Nature
    Volume: 647, P: 268-276
  • Previous ophthalmic foundation models have struggled to generalize effectively to diverse and rare fundus diseases, restricting their clinical applicability. Here, the authors introduce a vision-language foundation model that demonstrates superior performance in diagnosing both common and rare fundus conditions.

    • Meng Wang
    • Tian Lin
    • Huazhu Fu
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-17
  • The flagship paper of the ICGC/TCGA Pan-Cancer Analysis of Whole Genomes Consortium describes the generation of the integrative analyses of 2,658 cancer whole genomes and their matching normal tissues across 38 tumour types, the structures for international data sharing and standardized analyses, and the main scientific findings from across the consortium studies.

    • Lauri A. Aaltonen
    • Federico Abascal
    • Christian von Mering
    ResearchOpen Access
    Nature
    Volume: 578, P: 82-93
  • Experimental measurements of high-order out-of-time-order correlators on a superconducting quantum processor show that these correlators remain highly sensitive to the quantum many-body dynamics in quantum computers at long timescales.

    • Dmitry A. Abanin
    • Rajeev Acharya
    • Nicholas Zobrist
    ResearchOpen Access
    Nature
    Volume: 646, P: 825-830
  • An analysis of 18 metagenomic datasets of individuals with colorectal cancer, adenomas and healthy controls yields improved cancer prediction accuracy based solely on gut metagenomics, as well as the identification of new species associated with the development of cancer.

    • Gianmarco Piccinno
    • Kelsey N. Thompson
    • Nicola Segata
    ResearchOpen Access
    Nature Medicine
    Volume: 31, P: 2416-2429
  • CSF total tau (t-tau), often used as a marker of neuronal damage, is more strongly linked to synaptic degeneration. Here, the authors show that t-tau better reflects synaptic dysfunction than axonal or neuronal loss in Alzheimer’s disease.

    • Carolina Soares
    • Bruna Bellaver
    • Tharick A. Pascoal
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-10