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Showing 1–22 of 22 results
Advanced filters: Author: Umeharu Ohto Clear advanced filters
  • The hepatitis B virus surface protein recognizes host entry receptor via its intrinsically disordered peptide. The authors reveal the dynamic process of the viral surface protein that involves a stepwise binding maturation for establishing high affinity and specific virus-receptor entry complex.

    • Chisa Kobayashi
    • Toru Ekimoto
    • Koichi Watashi
    ResearchOpen Access
    Nature Communications
    Volume: 17, P: 1-16
  • LGR4, RSPO and ZNRF3 are key regulators of the Wnt/β-catenin signaling pathway. Here, the authors reveal cryo-EM structures of human LGR4, the LGR4-RSPO2 and LGR4-RSPO2-ZNRF3 complexes, thereby providing structural insights for their regulatory mechanism of Wnt/β-catenin signaling.

    • Yuxuan Peng
    • Akiko Fujimura
    • Umeharu Ohto
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-10
  • NOD2 has a role in host innate immune responses, activating the NF-κB signalling pathway and mutations have been associated with chronic inflammatory disorders. Here, Maekawa et al. solved the structure of NOD2 in its inactive form, suggesting a mechanism for autoinhibition.

    • Sakiko Maekawa
    • Umeharu Ohto
    • Toshiyuki Shimizu
    ResearchOpen Access
    Nature Communications
    Volume: 7, P: 1-11
  • Toll-like receptors (TLRs) have key roles in innate immunity. Here, Shimizu and colleagues report crystal structures of TLR8 in complex with single-stranded RNA that reveal the molecular basis for recognition of a natural ligand.

    • Hiromi Tanji
    • Umeharu Ohto
    • Toshiyuki Shimizu
    Research
    Nature Structural & Molecular Biology
    Volume: 22, P: 109-115
  • In this study, Asami et al. present the cryo-EM structure of the complex between hepatitis B virus protein and its host entry receptor NTCP, which provide a blueprint for the rational design of anti-HBV drugs targeting virus entry.

    • Jinta Asami
    • Jae-Hyun Park
    • Umeharu Ohto
    Research
    Nature Structural & Molecular Biology
    Volume: 31, P: 447-454
  • Cryo-electron microscopy structures of the bile acid transporter NTCP in the apo state and in complex with the preS1 domain of hepatitis B virus (HBV) provide insight into NTCP substrate transport and HBV recognition mechanisms.

    • Jinta Asami
    • Kanako Terakado Kimura
    • Umeharu Ohto
    Research
    Nature
    Volume: 606, P: 1021-1026
  • M protein plays essential roles in virus assembly and morphogenesis. Here, authors reveal two cryo-EM structures of M protein from SARS-CoV-2 that suggest conformational dynamics of M protein and its role in virus assembly.

    • Zhikuan Zhang
    • Norimichi Nomura
    • Toshiyuki Shimizu
    ResearchOpen Access
    Nature Communications
    Volume: 13, P: 1-12
  • Toll-like receptor 8 (TLR8) plays essential roles in the innate immune response to viral single-stranded RNA (ssRNA), so small molecule modulators of TLR8 are of interest, however adverse effects limit their use. Here, the authors report a tetrasubstituted imidazole CU-CPD107 with dichotomous behaviour, which inhibits R848-induced TLR8 signaling, but shows synergistic activity in the presence of ssRNA, making it a potential antiviral agent.

    • Yi Yang
    • Adam Csakai
    • Hang Yin
    ResearchOpen Access
    Nature Communications
    Volume: 12, P: 1-9
  • Cryo-EM structures of nucleic acid–sensing Toll-like receptors in complex with their trafficking chaperone UNC93B1, a protein that mediates TLR compartmentalization important for self versus non-self discrimination, provide insights into their interaction.

    • Hanako Ishida
    • Jinta Asami
    • Toshiyuki Shimizu
    Research
    Nature Structural & Molecular Biology
    Volume: 28, P: 173-180
  • A series of Toll-like receptor 7 (TLR7)-specific antagonists and extensive structural analysis reveal the open conformation of the receptor and the structural basis of TLR7 antagonism. One of the compounds shows efficacy in treating mouse model of systemic lupus erythematosus.

    • Shingo Tojo
    • Zhikuan Zhang
    • Toshiyuki Shimizu
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-11
  • TLR7 triggers immune responses upon sensing microbial RNA, and its endosomal localization is thought to prevent TLR7 activation by host RNA. Here, Kanno et al. show that TLR7 is also present on the surface of immune cells, and that anti-TLR7 antibody can prevent TLR7-mediated autoimmunity.

    • Atsuo Kanno
    • Natsuko Tanimura
    • Kensuke Miyake
    Research
    Nature Communications
    Volume: 6, P: 1-12
  • Discrimination between self and microbial DNA by innate receptors such as TLR9 relies on intracellular compartmentalization to increase specificity. Chan et al. show that activation of TLR9 by DNA ligands requires their processing by endolysosomal DNase II, restricting TLR9 activation to this organelle.

    • Mei Po Chan
    • Masahiro Onji
    • Kensuke Miyake
    Research
    Nature Communications
    Volume: 6, P: 1-10
  • HTL and D14 receptors perceive the structurally similar signaling compounds karrikin and strigolactone. Here, the authors show that ShD14 and a divergent clade of ShHTLs from Strigae capable of recognizing strigolact are capable of recognizing strigolactone and provide structural insights into the evolution of ligand specificity.

    • Yuqun Xu
    • Takuya Miyakawa
    • Masaru Tanokura
    ResearchOpen Access
    Nature Communications
    Volume: 9, P: 1-11
  • High-throughput screening identified potent small-molecule inhibitors of the endosomal Toll-like receptor TLR8 that stabilize the preformed TLR8 dimer in its resting state by binding to a unique site on the inactive dimer interface.

    • Shuting Zhang
    • Zhenyi Hu
    • Hang Yin
    Research
    Nature Chemical Biology
    Volume: 14, P: 58-64