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Showing 1–50 of 255 results
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  • Chen et al. report a tailored self-assembled monolayer to create a localized 2D/3D perovskite heterojunction. This strategy reduces interfacial loss, achieving photovoltages >90% of thermodynamic limit for wide-bandgap cells, and enables perovskite-organic tandem solar cells with efficiency of 27.11%.

    • Mingqian Chen
    • Wenlin Jiang
    • Alex K.-Y. Jen
    ResearchOpen Access
    Nature Communications
    P: 1-11
  • Self-supervised reconstruction structured illumination microscopy (SSR-SIM) is a reconstruction approach for SIM that improves image reconstruction by including light modulation priors and information on reconstruction artifacts, while simultaneously eliminating the need for ground-truth images. The improvements allow long-term imaging of sensitive cellular processes.

    • Jiahao Liu
    • Xue Dong
    • Dong Li
    Research
    Nature Methods
    P: 1-10
  • Identifying jets originating from heavy quarks plays a fundamental role in hadronic collider experiments. In this work, the ATLAS Collaboration describes and tests a transformer-based neural network architecture for jet flavour tagging based on low-level input and physics-inspired constraints.

    • G. Aad
    • E. Aakvaag
    • L. Zwalinski
    ResearchOpen Access
    Nature Communications
    Volume: 17, P: 1-22
  • Previous ophthalmic foundation models have struggled to generalize effectively to diverse and rare fundus diseases, restricting their clinical applicability. Here, the authors introduce a vision-language foundation model that demonstrates superior performance in diagnosing both common and rare fundus conditions.

    • Meng Wang
    • Tian Lin
    • Huazhu Fu
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-17
  • There’s an emerging body of evidence to show how biological sex impacts cancer incidence, treatment and underlying biology. Here, using a large pan-cancer dataset, the authors further highlight how sex differences shape the cancer genome.

    • Constance H. Li
    • Stephenie D. Prokopec
    • Christian von Mering
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-24
  • A new artificial intelligence model, DeepSeek-R1, is introduced, demonstrating that the reasoning abilities of large language models can be incentivized through pure reinforcement learning, removing the need for human-annotated demonstrations.

    • Daya Guo
    • Dejian Yang
    • Zhen Zhang
    ResearchOpen Access
    Nature
    Volume: 645, P: 633-638
  • Analysis of cancer genome sequencing data has enabled the discovery of driver mutations. Here, as part of the ICGC/TCGA Pan-Cancer Analysis of Whole Genomes (PCAWG) Consortium the authors present DriverPower, a software package that identifies coding and non-coding driver mutations within cancer whole genomes via consideration of mutational burden and functional impact evidence.

    • Shimin Shuai
    • Federico Abascal
    • Christian von Mering
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-12
  • Perfect absorption can be obtained for a single port device, or a device with multiple incident beams, but for multiport devices, the absorption is limited to around 50%. In this work, Rao et al. overcome this limitation, demonstrating near perfect absorption in a two port cavity magnon system.

    • J. W. Rao
    • P. C. Xu
    • C.-M. Hu
    ResearchOpen Access
    Nature Communications
    Volume: 12, P: 1-7
  • The death of massive stars has traditionally been discovered by explosive events in the gamma-ray band. Liu et al. show that the sensitive wide-field monitor on board Einstein Probe can reveal a weak soft-X-ray signal much earlier than gamma rays.

    • Y. Liu
    • H. Sun
    • X.-X. Zuo
    Research
    Nature Astronomy
    Volume: 9, P: 564-576
  • Federated learning (FL) algorithms have emerged as a promising solution to train models for healthcare imaging across institutions while preserving privacy. Here, the authors describe the Federated Tumor Segmentation (FeTS) challenge for the decentralised benchmarking of FL algorithms and evaluation of Healthcare AI algorithm generalizability in real-world cancer imaging datasets.

    • Maximilian Zenk
    • Ujjwal Baid
    • Spyridon Bakas
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-20
  • Non-Hermiticity is usually considered detrimental to quasiparticle physics. Here, the authors show that such an assumption of Hermiticity can be lifted in the context of a lattice model containing two non-Hermitian Dirac cones, with one hosting amplifying Dirac quasiparticles and the other hosting decaying ones.

    • Xinrong Xie
    • Fei Ma
    • Haoran Xue
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-8
  • Here the authors report asperigimycins, fungal ribosomally synthesized and post-translationally modified peptides with a heptacyclic scaffold. After chemically modifying them for nanomolar anticancer activity, CRISPR screening identifies SLC46A3 as a key transporter for their uptake in cells.

    • Qiuyue Nie
    • Fanglong Zhao
    • Xue Gao
    Research
    Nature Chemical Biology
    Volume: 21, P: 1938-1947
  • The authors present SVclone, a computational method for inferring the cancer cell fraction of structural variants from whole-genome sequencing data.

    • Marek Cmero
    • Ke Yuan
    • Christian von Mering
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-15
  • Quantum state engineering necessitates transfer between quantum states. Here the authors demonstrate coherent population transfer between un- or weakly-coupled states of solid state systems, superconducting Xmon and phase qutrits, using stimulated Raman adiabatic passage and microwave driving.

    • H. K. Xu
    • C. Song
    • S. P. Zhao
    ResearchOpen Access
    Nature Communications
    Volume: 7, P: 1-6
  • In forests, trait expression is influenced by tree-tree interactions. Castro Sánchez-Bermejo et al. show how phenotypic variability of tree species decreases with tree diversity and contributes importantly to functional diversity in forests.

    • Pablo Castro Sánchez-Bermejo
    • Carlos P. Carmona
    • Sylvia Haider
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-15
  • A super-pangenome analysis incorporating 123 newly sequenced bryophyte genomes reveals that bryophytes exhibit a larger number of unique and lineage-specific gene families than vascular plants.

    • Shanshan Dong
    • Sibo Wang
    • Yang Liu
    ResearchOpen Access
    Nature Genetics
    Volume: 57, P: 2562-2569
  • Multi-omics datasets pose major challenges to data interpretation and hypothesis generation owing to their high-dimensional molecular profiles. Here, the authors develop ActivePathways method, which uses data fusion techniques for integrative pathway analysis of multi-omics data and candidate gene discovery.

    • Marta Paczkowska
    • Jonathan Barenboim
    • Christian von Mering
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-16
  • The flagship paper of the ICGC/TCGA Pan-Cancer Analysis of Whole Genomes Consortium describes the generation of the integrative analyses of 2,658 cancer whole genomes and their matching normal tissues across 38 tumour types, the structures for international data sharing and standardized analyses, and the main scientific findings from across the consortium studies.

    • Lauri A. Aaltonen
    • Federico Abascal
    • Christian von Mering
    ResearchOpen Access
    Nature
    Volume: 578, P: 82-93
  • Paired electrosynthesis is an efficient green process that minimizes resource and energy consumption as well as waste generation. The authors demonstrate an electrolysis system that pairs CO2 reduction to CO at the cathode with allyl alcohol oxidation to acrolein at the anode.

    • Xue Wang
    • Peihao Li
    • Edward H. Sargent
    Research
    Nature Sustainability
    Volume: 7, P: 931-937
  • Why joints are highly responsive to systemic inflammation is unknown. Hasegawa et al. sought to address this question, developing a whole-mount imaging system of the entire synovium to profile the vascular, neuronal and immune components.

    • Tetsuo Hasegawa
    • Colin Y. C. Lee
    • Menna R. Clatworthy
    ResearchOpen Access
    Nature Immunology
    Volume: 25, P: 2270-2283
  • Analyses of 2,658 whole genomes across 38 types of cancer identify the contribution of non-coding point mutations and structural variants to driving cancer.

    • Esther Rheinbay
    • Morten Muhlig Nielsen
    • Christian von Mering
    ResearchOpen Access
    Nature
    Volume: 578, P: 102-111
  • Integrative analyses of transcriptome and whole-genome sequencing data for 1,188 tumours across 27 types of cancer are used to provide a comprehensive catalogue of RNA-level alterations in cancer.

    • Claudia Calabrese
    • Natalie R. Davidson
    • Christian von Mering
    ResearchOpen Access
    Nature
    Volume: 578, P: 129-136
  • Beige fat activation involves a fuel switch to fatty acid oxidation following chronic cold adaptation. Here, the authors show that Sortilin in adipose tissues facilitates the translocation of ACSL1 from the mitochondria to the endolysosomal pathway for degradation, which controls adipose tissue fatty acid oxidation and substrate fuel selection during beige fat activation.

    • Min Yang
    • Jing Ge
    • Yong Chen
    ResearchOpen Access
    Nature Communications
    Volume: 15, P: 1-17
  • By using a photonic synthetic lattice, it can be experimentally demonstrated that Dirac masses can be induced by means of non-Hermitian perturbations based on optical gain and loss.

    • Letian Yu
    • Haoran Xue
    • Y. D. Chong
    Research
    Nature
    Volume: 632, P: 63-68
  • Memory T cells are particularly reliant on fatty acid oxidation as a source of energy. Here the authors show this reliance is controlled by AMPK sensing of glucose deprivation that triggers SENP1-Sirt3 signalling, driving fatty acid oxidation and memory differentiation in T cells via deacetylation of YME1L1 to induce mitochondrial fusion.

    • Jianli He
    • Xun Shangguan
    • Jinke Cheng
    ResearchOpen Access
    Nature Communications
    Volume: 12, P: 1-14
  • LaccID, an engineered laccase, enables hydrogen-peroxide-free proximity labeling and electron microscopy (EM) in mammalian cells. Notably, LaccID is selectively active at the cell surface, enabling the mapping of the dynamic T cell–tumor surfaceome and its use as a genetically encodable EM tag, expanding the toolkit for cell-based imaging and proteomics.

    • Song-Yi Lee
    • Heegwang Roh
    • Alice Y. Ting
    ResearchOpen Access
    Nature Chemical Biology
    Volume: 21, P: 1895-1905
  • The strong connection between the dynamics of a physical system and its Hamiltonian’s spectrum has scarcely been applied in the non-Hermitian case. Here, the authors use a photonic quantum walk to confirm and expand previous theoretical analyses connecting self-acceleration dynamics with non-trivial point-gap topology.

    • Peng Xue
    • Quan Lin
    • Wei Yi
    ResearchOpen Access
    Nature Communications
    Volume: 15, P: 1-11
  • In somatic cells the mechanisms maintaining the chromosome ends are normally inactivated; however, cancer cells can re-activate these pathways to support continuous growth. Here, the authors characterize the telomeric landscapes across tumour types and identify genomic alterations associated with different telomere maintenance mechanisms.

    • Lina Sieverling
    • Chen Hong
    • Christian von Mering
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-13
  • A genome-wide association meta-analysis study of blood lipid levels in roughly 1.6 million individuals demonstrates the gain of power attained when diverse ancestries are included to improve fine-mapping and polygenic score generation, with gains in locus discovery related to sample size.

    • Sarah E. Graham
    • Shoa L. Clarke
    • Cristen J. Willer
    Research
    Nature
    Volume: 600, P: 675-679
  • Inbreeding depression has been observed in many different species, but in humans a systematic analysis has been difficult so far. Here, analysing more than 1.3 million individuals, the authors show that a genomic inbreeding coefficient (FROH) is associated with disadvantageous outcomes in 32 out of 100 traits tested.

    • David W Clark
    • Yukinori Okada
    • James F Wilson
    ResearchOpen Access
    Nature Communications
    Volume: 10, P: 1-17
  • Hydrogel materials have emerged as versatile platforms for biomedical applications. Here this group reports an mRNA lipid nanoparticle-incorporated microgel matrix for immune cell recruitment/antigen expression and presentation/cellular interaction thereby eliciting antitumor efficacy with a single dose.

    • Yining Zhu
    • Zhi-Cheng Yao
    • Hai-Quan Mao
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-16
  • Whole-genome sequencing data for 2,778 cancer samples from 2,658 unique donors across 38 cancer types is used to reconstruct the evolutionary history of cancer, revealing that driver mutations can precede diagnosis by several years to decades.

    • Moritz Gerstung
    • Clemency Jolly
    • Christian von Mering
    ResearchOpen Access
    Nature
    Volume: 578, P: 122-128
  • With the generation of large pan-cancer whole-exome and whole-genome sequencing projects, a question remains about how comparable these datasets are. Here, using The Cancer Genome Atlas samples analysed as part of the Pan-Cancer Analysis of Whole Genomes project, the authors explore the concordance of mutations called by whole exome sequencing and whole genome sequencing techniques.

    • Matthew H. Bailey
    • William U. Meyerson
    • Christian von Mering
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-27
  • A global network of researchers was formed to investigate the role of human genetics in SARS-CoV-2 infection and COVID-19 severity; this paper reports 13 genome-wide significant loci and potentially actionable mechanisms in response to infection.

    • Mari E. K. Niemi
    • Juha Karjalainen
    • Chloe Donohue
    ResearchOpen Access
    Nature
    Volume: 600, P: 472-477
  • The molecular mechanisms that maintain thymic epithelial cell (TEC) identity throughout life are incompletely understood. Here, the authors demonstrate that the transcription factor, Ovol2, maintains post-natal TECs by preventing their epithelial-to-mesenchymal transition.

    • Xue Zhong
    • Nagesh Peddada
    • Bruce Beutler
    ResearchOpen Access
    Nature Communications
    Volume: 14, P: 1-22
  • Ferroelectric materials possess spontaneous electrical polarization coupled to their underlying lattice structure, which may be utilized technologically. Here, the authors use band-excitation piezoresponse/elastic spectroscopy to study the sub-megahertz dynamics of a structural phase transition in BiFeO3.

    • Q Li
    • Y. Cao
    • N. Balke
    ResearchOpen Access
    Nature Communications
    Volume: 6, P: 1-9
  • Here, the authors compared measurements between 34 laboratories from 19 countries, to quantify by mass spectrometry four ceramides of clinical relevance in human blood plasma Standard Reference Materials. The main goals were to evaluate concordance obtained in a large inter-laboratory trial and to report absolute concentrations of four circulating lipids in a publicly available standard.

    • Federico Torta
    • Nils Hoffmann
    • Markus R. Wenk
    ResearchOpen Access
    Nature Communications
    Volume: 15, P: 1-15
  • Rapid diagnosis of bloodstream infections is vital for timely effective treatment. Here, Mao and Wan et al developed a method using a dual stem-loop DNA signal amplifier, to achieve ultrasensitive, rapid, amplification-free detection of pathogens from human serum.

    • Huiyou Chen
    • Fengge Song
    • Chuanbin Mao
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-14
  • Morley, Pomat and colleagues identify a homozygous mutation in COQ6 in an indigenous population of Papua New Guinea. This allele predisposes children to increased risk of acute lower respiratory infections in response to Streptococcus pneumoniae. This sensitivity is recapitulated in Coq6DY mice in the nonhematopoietic compartment.

    • Emma C. Walker
    • Sarah Javati
    • Sharon Celeste Morley
    Research
    Nature Immunology
    Volume: 25, P: 2247-2258