Main

In recent decades, some researchers have opined that it should be assumed until proven otherwise that all Plio-Pleistocene hominin species engaged in tool behaviours to some degree3,5,6,7. Meanwhile, others have argued that Paranthropus was a toolmaker on the basis of analyses of hand bones with uncertain attribution to the southern African species Paranthropus robustus8,9,10,11,12. However, fossil hand bones confidently associated with taxonomically diagnostic craniodental remains have been conspicuously missing from these debates. Almost none of the approximately 2.5–1.0 million-year-old hominin hand fossils from eastern Africa are known with certainty to belong to a particular species13. This uncertainty extends to the OH 7 hand bones, which form part of the holotype of Homo habilis2, but whose species assignment has been questioned (for example, see ref. 14).

Here we describe a hominin partial skeleton that includes hand and foot bones unambiguously associated with craniodental elements of P.boisei. KNM-ER 101000 was recovered in 2019–2021 during survey and excavations at Koobi Fora on the eastern side of Lake Turkana, Kenya (Supplementary Fig. 1). The fossils derive from laminated sandy silt that directly overlies a known hominin trackway surface (FE22)15. This sequence represents a lake margin facies approximately 10 m above the prominent stromatolitic marker bed A6 and 7.6 m below the base of the Koobi Fora Tuff complex16 (Fig. 1 and Supplementary Information). On the basis of this information, KNM-ER 101000 is estimated to be slightly older than 1.52 million years.

Fig. 1: KNM-ER 101000 locality, geostratigraphy and specimen distribution map.
Fig. 1: KNM-ER 101000 locality, geostratigraphy and specimen distribution map.
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a, Satellite map of the Turkana Basin region indicating the geospatial location of the KNM-ER 101000 excavation site. b, Stratigraphical section of the lake margin facies, including the interval from which the KNM-ER 101000 fossils derive. Fine sands with abundant nondecalcified molluscs, silts with saline crusts (halite) and clays with multiple pedogenic carbonate (Bk) horizons characterize this interval of strata. Note that the source strata for KNM-ER 101000 are 10–25 cm above a siltstone layer that has a known hominin trackway surface (FE22)15. c, Specimen distribution map of the KNM-ER 101000 excavation. Each grid square represents 1 × 1 metre. Numbers in parentheses refer to the specimen numbers in Supplementary Table 1. Specimens not listed on the map were recovered from sieving fragments from the mapped area after excavation. d, Image of the outcrop of the excavation site of KNM-ER 101000. The photograph was taken from the top of the hill looking down on the site, facing south. Base map in a from Google Earth (Google, Landsat/Copernicus, Data SIO, NOAA, US Navy, NGA, GEBCO). Diagram in b adapted with permission from ref. 15, AAAS.

Craniodental remains

Between approximately 2 and 1 million years ago (Ma) in eastern Africa, there is evidence of up to four contemporaneous hominin species: P.boisei, H.habilis, Homo rudolfensis and Homo erectus (for examples, see refs. 17,18,19). The teeth of KNM-ER 101000 resemble those of P.boisei in size more than those of any Homo species. Moreover, they exceed the sizes of Homo in all dimensions of the mandibular premolars and molars except for the buccolingual breadth of the second lower molar (M2), which falls within the upper limits of the early Homo range (Extended Data Fig. 2a–f and Supplementary Table 2). In terms of relative proportions, the ratio of the maxillary crown sizes of the canine and third upper molar (M3) (55%) of KNM-ER 101000 is within the range for P.boisei (49–56%) and below that of early Homo (66–76%), which signifies that KNM-ER 101000 possessed the relatively small canines that are characteristic of P.boisei (Fig. 2b). Hyperthick enamel is another well-established synapomorphy of Paranthropus20,21,22. The average enamel thickness (AET)23,24 of the maxillary and mandibular M3 specimens of KNM-ER 101000 is within the P.boisei range (M3 AET = 2.86 and M3 AET = 2.68; Fig. 2c). Overall, the dentition of KNM-ER 101000 strongly supports its taxonomic attribution to P.boisei.

Fig. 2: KNM-ER 101000 craniodental remains.
Fig. 2: KNM-ER 101000 craniodental remains.
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a, Diagnostic craniodental elements of KNM-ER 101000 shown in anatomical position against a silhouette of the reconstructed OH 5 cranium. The articular eminence is not to scale. Scale bar, 10 mm. b, Comparison of hominin anterior to posterior dentition sizes, depicted here as the ratio of maxillary M3 and canine crown modules, defined as (mesiodistal + buccolingual)/2. n = 10; see Supplementary Table 6 for details. c, AET of the maxillary M3 plotted in comparison to hominin and ape data from ref. 23 (n = 50, see Supplementary Table 4 for details). In b and c, data are presented as boxplots, with the median indicated by a vertical line, the box spanning the interquartile range and the whiskers extending to 1.5× the interquartile range from each quartile. The skull silhouette in a was created by Mark Belan.

Associated cranial fragments also preserve morphology diagnostic of P.boisei (Fig. 2a). These include a parietal fragment that preserves a prominent sagittal crest, which suggests that it can be attributed to a male P.boisei individual. The anterior margin of the zygomatic process of the maxilla originates in alignment with the third upper premolar (P3)19,25,26. Likewise, the nasoalveolar contour of the maxilla is flat, suggesting that the incisors would not have protruded beyond the bicanine line27. Computed tomography imaging of this maxillary fragment revealed a three-rooted fourth premolar (P4) (Supplementary Fig. 2), which is universally expressed in Paranthropus28. However, it is also present in some specimens attributed to early Homo. The right temporal bone preserves a well-defined and robust articular eminence, with a maximum preserved mediolateral length of 39 mm, which distinguishes it from the narrower mandibular fossae of Homo25,29. These features of the maxillary and temporal fragments are congruent with the identification of KNM-ER 101000 as P.boisei.

Hand and wrist elements

Spatially associated with these P.boisei craniodental elements are multiple bones from the right and left hands (Fig. 3 and Extended Data Fig. 1). As with the craniodental remains, there is no indication that more than one individual is represented (for example, there is no duplication of elements and no notable difference in element size). Bones of the left thumb include a mostly complete manual distal phalanx (mDP1), the proximal end of a proximal phalanx (mPP1) and the proximal half of a first metacarpal (Mc1). The palm is represented by a complete right fifth metacarpal (Mc5) and three other metacarpal shaft fragments. The finger bones include nine phalanges (six proximal and three intermediate), with the second proximal phalanx (mPP2) and the probable third intermediate (mIP3) phalanx preserved largely intact. Substantial portions of what are provisionally assigned to mIP2 and mPP4 are also preserved along with smaller phalangeal fragments, which are probably mPP3, mPP5 and mIP4. The wrist is represented by the left trapezoid and scaphoid and by the right lunate and hamate.

Fig. 3: Reconstructed left hand of KNM-ER 101000.
Fig. 3: Reconstructed left hand of KNM-ER 101000.
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Palmar (left) and dorsal (right) views. The following right elements were mirrored: hamate, lunate, Mc5 and proximal phalanx (second ray). See Supplementary Table 1 for a full list of element attributions and sides (where known). The outline is for illustrative purposes only and not an interpretation of the relative phalangeal lengths (see Extended Data Fig. 3 and Supplementary Fig. 3 for analyses of digit proportions). Scale bar, 10 mm. The hand outline was created by Francis Tre Lawrence.

KNM-ER 101000 indicates that P.boisei had essentially modern human-like intrinsic hand proportions. That is, the thumb was long relative to the palm and other fingers (Extended Data Fig. 3a–c and Supplementary Table 3), a characteristic also exhibited by known species of Australopithecus but not Ardipithecus ramidus, which had more ape-like hand proportions. Although only the base of the mPP1 is preserved, human-like thumb-to-finger proportions are indicated on the basis of the length of the Mc5 against both a reconstruction of the total pollical phalangeal length (using the mDP1 length plus the predicted mPP1 length based on the hallucal proximal phalanx length) and the mDP1 length alone (Supplementary Fig. 3a). Furthermore, the length of mPP2 compared with that of mDP1 indicates a thumb that was long relative to the index finger, as in recent humans and all fossil hominins except Ar.ramidus (Supplementary Fig. 3b). Such proportions in KNM-ER 101000 would have enabled P.boisei to form human-like precision grips that require opposition of the distal pads of the fingers to that of the thumb30.

The mDP1 is broadly similar in morphology to those of most other early hominin specimens but larger in absolute maximum length and width (Extended Data Fig. 3b). It is very robust, with an expanded apical tuft and a deep proximopalmar fossa and pronounced insertion gable for the tendon of flexor pollicis longus. Weathering prevents full assessment of the ungual fossa, but it seems to have been expansive, which is indicative of a well-developed digital pulp. The exceptionally broad apical tuft of KNM-ER 101000 is most similar to that of OH 7 (but OH 7 lacks any clear indication of a well-developed flexor pollicis longus muscle30), as well as to specimens of Homo naledi and to Neanderthals. Earlier hominins such as Orrorin tugenensis and Australopithecus afarensis exhibit moderately broad tufts similar to recent humans, whereas Ar.ramidus resembles Pan and Gorilla in the narrowness of its tuft. Broadening of the pollical distal phalanx may represent an adaptation to increased manual dexterity (for example, human-like forceful precision grips). However, what drove the extreme broadening of the distal phalanx in some of these hominin species is unclear.

In contrast to species of Australopithecus, KNM-ER 101000 exhibits a robust thumb, with evidence of well-developed thenar musculature. The pollical metacarpal, although lacking the distal half, is exceptionally robust with marked entheses. It is considerably larger in relative and absolute size than any of those known for australopiths, including KNM-ER 47000 (a specimen that has been tentatively attributed to P. boisei31; Extended Data Fig. 4a and Supplementary Table 3). The articular facet for the trapezium is strongly curved dorsopalmarly and radioulnarly as seen in extant great apes and in Australopithecus (Extended Data Fig. 4b,c). Such marked articular curvature is unlike the derived, relatively flatter condition (especially radioulnarly) shared among modern humans, Neanderthals and H.naledi.

The trapezoid is well preserved and, similar to those of extant great apes, is wedge-shaped with a relatively large triangular-shaped facet for the scaphoid and a mostly dorsally placed facet for the capitate. The palmar aspect of the bone is expanded proximodistally such that the radial and ulnar portions of the second metacarpal facet are oriented more parallel to the scaphoid facet than is typically seen in extant great apes. However, the palmar portion is not radioulnarly expanded as it is in modern humans, Neanderthals and H.naledi (Extended Data Fig. 5a,d).

The scaphoid preserves facets for the radius, capitate, lunate and trapezoid that are all mostly intact, but with some erosion near their respective boundaries; however, the tubercle (and most of the trapezium facet) is missing. As with all hominins and the African apes, the centrale portion is completely incorporated into the body. The shape and orientation of the capitate and lunate facets, as well as the large facet for the trapezoid that distally closes the scaphoid–capitate joint, are most similar to those of extant African apes. By contrast, modern humans, Neanderthals and H.naledi display a configuration which is more open distally and is confluent with an enlarged and palmarly placed capitate-trapezoid joint (Extended Data Fig. 5b,e).

The lunate is well preserved. The facet for the capitate head is deeply concave and the radiocarpal surface is convex and mediolaterally broad (Extended Data Fig. 5f). Overall, the lunate exhibits the morphology shared by African apes and hominins. However, in combination, the morphologies of the lunate and scaphoid suggest that KNM-ER 101000 mostly retained a primitive, African ape-like radiocarpal and midcarpal joint configuration (Extended Data Fig. 5c).

As with the thumb, the hypothenar elements of KNM-ER 101000 are robustly developed, which is suggestive of considerable ulnar-side hand strength (Extended Data Fig. 6). The hamulus of the hamate is long relative to the length of the hamate body (Extended Data Fig. 6a,c), which resembles the condition in Gorilla (particularly Gorilla beringei). However, unlike in Gorilla, Pan and Pongo, KNM-ER 101000 shows a more hominin-like relationship between the hamulus breadth and width and only a moderate distal inclination of the hamulus, which is similar to most other early hominins (Supplementary Fig. 4a,b, measurements are defined in the caption). The large hamulus of KNM-ER 101000 probably provided expanded entheses and increased leverage (longer moment arm) for the opponens digiti minimi and flexor digiti minimi muscles and probably the flexor carpi ulnaris with its connection to the hamulus through the pisohamate ligament. The morphology of the hamulus is accompanied by an Mc5 shaft that is very robust (Extended Data Fig. 6b,c) and exhibits marked radioulnar bowing with an exceptionally large and rugose crest along its ulnar aspect, which marks the distal attachment of the opponens digiti minimi (Extended Data Fig. 6c). In these aspects, the hypothenar complex of KNM-ER 101000 converges on the condition seen in G.beringei (Extended Data Fig. 6c). However, Gorilla and other great apes tend to have Mc5 and Mc4 bases that are ‘locked in’ by the strong distal inclination of the hamulus. By contrast, KNM-ER 101000 exhibits a more convex surface on the Mc5, and the correspondingly concave surface on the hamate indicates increased mobility of the fifth ray, similar to that of recent humans and other hominins. Pronounced protuberances at the base of the Mc5 mark attachment of the extensor carpi ulnaris (on the dorsal side) and the flexor carpi ulnaris (on the palmar side by way of the pisometacarpal ligament) along with the capsular ligaments of the fifth carpometacarpal joint.

The morphology of the non-pollical phalanges is consistent with that of the thumb and hypothenar region in exhibiting marked robusticity (Extended Data Figs. 7 and 8). The complete mPP2 is the most robust specimen in the fossil comparative sample. Moreover, its exceptional radioulnar breadth at the midshaft relative to the proximodistal length is matched only by a few male specimens of Gorilla (Extended Data Fig. 7a). KNM-ER 47000 (ref. 31) (ostensibly also representing P.boisei) is considerably more gracile, although this difference could reflect sexual dimorphism (see the G.beringei male–female comparison in Extended Data Fig. 7b). In overall gestalt, the proximal phalanges of KNM-ER 101000 resemble those of gorillas (especially G.beringei), although the complete mPP2 lacks strong longitudinal shaft curvature (Extended Data Fig. 7c,d) as do the less complete phalanges from the other digits (based on qualitative assessments). This result suggests that climbing and suspension may not have been a regular component of the adult male P.boisei locomotor repertoire. All of the mPP specimens of KNM-ER 101000 are similar to those of gorillas in having pronounced flexor sheath ridges, which indicate strong recruitment of the long digital flexors (sometimes interpreted as another correlate of climbing or suspension). However, these ridges are generally less well developed in the more arboreal great apes (genera Pongo and Pan), which renders the biological role of this trait (beyond strong digital grasping) difficult to interpret32,33,34,35.

The intermediate phalanges of KNM-ER 101000 evince a robusticity similar to the proximal phalanges, which is again matched only by a few Gorilla specimens and by OH 7, possible P.robustus or Homo specimens from Swartkrans and some Neanderthal specimens. The longitudinal shaft curvature of the intermediate phalanges does not clearly separate recent Homo sapiens from the African apes, but the measurable intermediate phalanx of KNM-ER 101000 is among the least curved in the fossil sample, with only two specimens from Swartkrans exhibiting lower included angle values (Supplementary Table 5). Relative to the midshaft radioulnar width, the mPP2 of KNM-ER 101000 has an exceptionally narrow distal trochlea (Extended Data Fig. 8b). Although relative trochlear breadth has been suggested to align OH 7 with Paranthropus14 (rather than its typical attribution to H.habilis36), there is extensive overlap with the extant ape sample and several of the other hominin samples in this measurement (Extended Data Fig. 8b).

A small fragment of the left proximal radius of KNM-ER 101000 is preserved. Much like the other known radius of P.boisei (OH 80)37, the size of the radial tuberosity (long axis of enthesis = 27.8 mm, perpendicular to the long axis = 17.6 mm) suggests that KNM-ER 101000 possessed a large biceps brachii muscle that was probably capable of generating strong forearm flexion and supination. Its absolute cross-sectional cortical area is within the range of Gorilla and in the upper quartile of Pan troglodytes, well above that of recent humans (Supplementary Fig. 5). Some studies have suggested that P.boisei would have engaged in arboreal behaviours on the basis of the thick cortical bone observed in the tentatively attributed humerus of KNM-ER 47000 (ref. 38). Although a strong upper limb could have facilitated climbing behaviours, other explanations such as systemically thick cortical bone in this species should also be considered in the context of the overall morphological pattern across the postcranium39.

Pedal elements

The right foot of KNM-ER 101000 is represented by a complete hallucal proximal phalanx (pPP1), a non-hallucal proximal phalanx (probably pPP5) and a right third metatarsal (Mt3) that is missing its distal end (Extended Data Figs. 9 and 10). The pPP1 is intrinsically robust, with a dorsally canted proximal articular surface similar to that of recent humans and other hominin fossils (for example, SKX 45690 and StW 470). Dorsal canting facilitates increased dorsiflexion during bipedal push-off40,41. The logged ratio of pPP1-to-pPP5 length in KNM-ER 101000 reflects a hallux that is long relative to that of great apes but short in comparison to recent humans. The pPP5 of KNM-ER 101000 is relatively short, displaying reduced curvature compared to Ar.ramidus (ARA-VP-6/500-044 and GWM67/P2u) and A.afarensis (A.L. 333-115i, A.L. 333-154 and A.L. 333-160) along with a greater dorsal inclination of its metatarsophalangeal joint facet that matches pedal phalanges from Neanderthals, Pleistocene H.sapiens and SKX 16699 (ref. 42), which probably reflect similar functionality of the lateral forefoot (Extended Data Figs. 9 and 10). A high positive Mt3 torsion angle (about 41°) in KNM-ER 101000 indicates the presence of a well-developed transverse arch, which significantly contributes to stiffness in the hominin foot43. By comparison, the Mt3 of OH 8 has a lower Mt3 torsion angle (15°) than KNM-ER 10100, falling near KNM-ER 803 and Sterkfontein specimens attributed to Australopithecusafricanus, but its value falls within the range of the modern human sample. Finally, the Mt3 of KNM-ER 101000 displays a dorsoplantarly tall and relatively flat proximal articular surface, which is associated with tarsometatarsal joint stability in bipeds44. The Mt3 base of OH 8 is slightly shorter than that of KNM-ER 101000, with a ratio value falling near those of H.naledi (U.W. 101-1035 and U.W. 101-1457), Dmanisi H.erectus (D2021) and SKX 247. However, the difference between OH 8 and KNM-ER 101000 could be sampled in our modern human and chimpanzee samples. Overall, the pedal elements of KNM-ER 101000 indicate that increased stiffness and bipedal push-off characterized the foot of P.boisei. However, the relatively short hallux of KNM-ER 101000 also suggests that the push-off mechanics in P.boisei would have differed slightly from those of recent humans (sensu45). The reduced intrinsic length and diaphyseal curvature of its non-hallucal proximal phalanx are more human-like than those of A.afarensis and Ar.ramidus, which suggests that there was little reliance on pedal grasping in P.boisei by approximately 1.5 Ma. Although a fully bipedal foot does not preclude occasional (or even frequent) climbing, as observed in some human populations46, it suggests that this behaviour was not the primary selective force in the locomotor repertoire of this species.

Discussion

It has long been assumed that the earliest members of the genus Homo manufactured and used stone tools2. However, the discovery of 3.3 million-year-old stone tools at Lomekwi47 together with 3.0-million-year-old Oldowan artefacts alongside a purported Paranthropus molar at Nyayanga4 has reignited debate about possible tool use in other taxa. On the basis of analyses of KNM-ER 101000, it is clear that the hand of P.boisei had derived thumb–finger length proportions and was probably capable of grips similar to those of modern humans. However, judging from the retention of a suite of plesiomorphic features in the wrist and base of the thumb, radioulnar transmission of loads from the powerful thumb probably differed from that of recent humans and Neanderthals, which indicate differences in habitual thumb use during manual manipulation. We propose that precision-pinch-type grips were likely to be less effective in P.boisei than in later members of the genus Homo with a more derived trapeziometacarpal and radial wrist morphology. However, this does not rule out tool behaviours (including the making and use of early lithic technology).

Overall, the functional morphology of the hand and wrist of KNM-ER 101000 suggests that it had a powerful grip strength, particularly in the ulnar aspect of the hand. An important caveat is that tool use may not have been the only factor driving selection on hominin hands. For example, in some fossil hominin taxa such as A.afarensis and H.naledi, there is compelling evidence to suggest that climbing was an important part of the locomotor repertoire. There are indications of strong grasping in KNM-ER 101000 that would have facilitated climbing performance, and P.boisei may have engaged in arboreal behaviour at some frequency. However, one of the clearest signals of frequent climbing and suspensory behaviour in primates (that is, longitudinal shaft curvature of the manual and pedal phalanges48) is notably less expressed in KNM-ER 101000 than in A.afarensis, H.naledi and extant African apes, whereas pedal morphology in KNM-ER 101000 evinces a greater commitment to terrestriality than in earlier hominins.

Although one possibility for explaining the convergence of gorilla-like hand morphology in P.boisei is that it may have adopted a climbing style that was specifically gorilla-like, the distinctive features of the climbing gait in gorillas seem to be a compensation for their large body mass49. Thus, it is unclear why P.boisei would have adopted such a mode of climbing given that estimates of its body mass50 are similar to those of other early hominins such as A.afarensis51, and notably smaller than modern gorillas. Consequently, although any primate will use its hands in a variety of behaviours, climbing competency may not have been the sole (nor likely to be the primary) selective factor in the convergent evolution of the gorilla-like manual features in P.boisei.

In primates more broadly, feeding behaviours often require complex manual manipulation and forceful processing52. Mountain gorillas use forceful, palm dominated power grasping that incorporates the fifth digit during arboreal behaviours, but they also regularly use their hands in this capacity to access edible portions of tough vegetation53. The morphological convergence of P.boisei hand morphology with that of G.beringei (especially in the hypothenar region and manual phalanges) is notable in light of dietary reconstructions indicating that P.boisei subsisted on a tough diet dominated by herbaceous, grass-like plants (reviewed in ref. 54). On the basis of the overall morphology of the postcranial elements of KNM-ER 101000 (and possibly other specimens attributed to P.boisei, such as OH 80), the similarities to gorillas may reflect intensive manual processing of such plants for food.

In addition to insights into the paleobiology of Paranthropus, KNM-ER 101000 provides an opportunity to revisit longstanding debates over the taxonomic attribution of the foot bones from OH 7 and the hand bones from OH 8 (refs. 10,14,55). The morphology and relative proportions of the intermediate phalanges of KNM-ER 101000 are highly similar to those of OH 7. Although this similarity could be viewed as evidence in favour of the hypothesis that the hand of OH 7 belongs to Paranthropus rather than H.habilis14, the degree of variation in relative trochlear breadth makes the taxonomic significance of this metric unclear. It seems unlikely that a pollical metacarpal base as curved as the Mc1 in KNM-ER 101000 (or KNM-ER 47000) would articulate with a trapezium like in OH 7. This finding weakens the hypothesis that the hand of OH 7 belongs to Paranthropus14 (further detailed analyses are required to establish whether this range of variation occurs in a single species). Poor scaphoid preservation in both OH 7 and KNM-ER 101000 limits the utility of comparison between these elements. The Mt3 of KNM-ER 101000 is similar to that of OH 8, which has intrinsically large Mt2 and Mt4 articular facets and a dorsoplantarly tall diaphysis relative to its mediolateral breadth. By contrast, the Mt3 diaphysis of KNM-ER 101000 has a substantially greater transverse curvature and a dorsoplantarly flatter proximal articular surface than OH 8. However, the extent to which these metatarsal traits distinguish P.boisei from H.habilis is currently unknown.

More generally, because Homo and Paranthropus are sister taxa21,22,27, the KNM-ER 101000 fossils enable the reconstruction of the probable ancestral condition of the hand that would have characterized the earliest members of both the Homo and Paranthropus lineages. Modern humans and Neanderthals share several derived features in the thumb and radial wrist bones that probably evolved as an adaptation to making and using stone tools3,7,56,57,58. Exactly when this complex of derived features first evolved remains unclear, but available fossil evidence suggests that it had occurred by at least 1.4 Ma (for example, KNM-WT 51260)59.

Our analyses reveal that the last common ancestor (LCA) of Homo and Paranthropus (and therefore the earliest members of the genus Homo) would have possessed a relatively robust Mc5 and Mc1 and a radially expanded first carpometacarpal joint (Fig. 4). This proportional increase in the marginal elements of the hand represents an adaptive shift from earlier australopiths, such as those probably responsible for the Lomekwian stone tools47, and indicates an increased reliance on stabilized power grips56. By comparison, derived aspects of the modern human wrist that facilitate effective precision-pinch grips do not seem to have been present in the Homo–Paranthropus LCA. Rather, these evolved later in the Homo lineage.

Fig. 4: Reconstruction of hominin hand evolution.
Fig. 4: Reconstruction of hominin hand evolution.
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Summary of ancestral state reconstructions highlighting key inferred transitions in hominin hand evolution. Ancestral state reconstructions were conducted across a phylogeny consisting of 6 extant apes and 14 hominin fossils for 20 morphological characteristics using maximum parsimony. No polarity or character ordering was assumed a priori. KNM-ER 101000 was taken as the sole representative of P.boisei, although it never differed in character state from KNM-ER 47000. FPL, flexor pollicis longus. Illustrations were created by Mark Belan.

If the derived features of the P.boisei hand are indeed convergent with gorillas to facilitate strong and repeated grips involved in intensive food processing, then it may support a model in which Paranthropus and Homo evolved divergent dietary strategies in a sympatric setting that allowed them to subsist as ecological specialists and generalists, respectively, with Homo including further commitment to intensified tool use60.

Methods

Immediately after specimen excavation and preparation, surface scans of each fossil element were generated by T. Gichunge using a HDI Advance 3D scanner (Polyga). Subsequently, micro-computed tomography (microCT) scans of KNM-ER 101000 were generated at the Stellenbosch University CT Scanner Facility61 with a General Electric Phoenix VTOMEX L240 microCT system (the scan resolution ranged from 15 to 50 μm depending on the size and density of the element).

Dental metrics

Linear measurements of the dentition of KNM-ER 101000 were recorded from the original fossils using Mauser 0.05 mm accuracy dial calipers. Comparative dental metrics were obtained from published sources (Supplementary Tables 610). For comparisons between the anterior and posterior dentition, crown modules of hominin maxillary M3 specimens and canines were calculated per a previous study62.

To measure enamel thickness, buccolingual sections through the apices of the dentine horns of the mesial cusps of the unworn maxillary RM3 (protocone and paracone) and the unworn mandibular RM3 (metaconid and protoconid) were virtually extracted from the microCT scans of these teeth in Avizo (v.2021). In each slice, the enamel–dentine junction (EDJ) was clearly visible, and the area (mm2) of the enamel cap was measured using ImageJ. With reference to the RM3, a wedge of dentine was lost below the preserved EDJ of the metaconid, and the missing cervical extension of its enamel cap could be estimated with reasonable accuracy by following its curvature inferiorly as previously advocated63. The area of the narrow crack through the cusp tip of the metaconid was subtracted from the overall estimated measurement of the enamel cap to obtain a value of 63.21 mm2, and its inferior length was subtracted from the overall estimated length of the EDJ to obtain a value of 22.11 mm. With reference to the RM3, the area of the wide crack through the intercuspal embrasure (1.80 mm2) was subtracted from the overall measurement of the enamel cap to obtain a value of 67.70 mm2, and its inferior length (0.73 mm) was subtracted from the overall measured length of the EDJ to obtain a value of 25.25 mm. The AET was then calculated by dividing the area of the enamel cap by the length of the EDJ. Summary metrics of comparative data from refs. 23,24 are provided in Supplementary Table 4.

Linear measurements of metacarpals and phalanges

Relevant linear dimensions of KNM-ER 101000 were measured and compared with data from extant comparative groups and available fossil hominins (see Supplementary Tables 1137 for details of the compositions of extant and fossil samples and data sources for each analysis).

Estimation of KNM-ER 101000 mPP1 length

Only the proximal base of the mPP1 is preserved for KNM-ER 101000. To estimate the total pollical phalangeal length (proximal plus distal), the mPP1 length was estimated on the basis of the length of the hallucal proximal phalanx, which in the comparative sample of extant H.sapiens (n = 53), Pan spp. (n = 52) and Gorilla spp. (n = 48) specimens correlates strongly with pollical proximal phalanx length (least squares regression: mPP1 length = 0.997 × pPP1 length − 0.38; r2 = 0.66; P < 0.001). The total mPP1 and mDP1 length using the mean estimate of the mPP1 length and the upper and lower 95% prediction intervals are plotted against the Mc5 length in Extended Data Fig. 3a to show the uncertainty, but is human-like in all cases. Note the relative length of only the distal pollical phalanx relative to the Mc5 length. Supplementary Fig. 3 also demonstrates the human-like proportions.

Manual phalangeal curvature

The longitudinal shaft curvature of the mPP2 and the complete mIP3 of KNM-ER 101000 were quantified using the included angle method. Landmarks were extracted from the 3D polygon model of the specimen to measure dimensions used to calculate the included angle per a previously described method64. The extant comparative sample was measured in the same way along with all compared fossils, except for one whose included angle values were taken from the literature (OH 86)65. The sample composition for the curvature analysis is provided in Supplementary Tables 34 and 35.

First metacarpal proximal articular surface

The principal curvatures of the articular surface were quantified for the Mc1 of KNM-ER 101000 and the extant and fossil comparative samples in the dorsopalmar and radioulnar directions using a quadric surface fit with a least-squares method57 (Extended Data Fig. 4b). Zero values indicate a flat surface with no curvature, whereas values greater or less than zero indicate a curved surface with more curved surfaces having larger absolute values than less curved surfaces. Because this articular surface in hominids is typically saddle-shaped, the sign indicates the direction of curvature (for example, dorsopalmar is positive, radioulnar is negative). Comparative sample details are provided in Supplementary Tables 21 and 22.

Trapezoid shape

A canonical variate analysis of trapezoid shape was conducted using angles between articular surfaces and relative surface areas (Extended Data Fig. 5a). The former were quantified by fitting least-squares planes to each and measuring the angles between the resulting planes66, whereas the latter were quantified by dividing the articular surface area by the surface area of the entire bone67. Comparative sample details are provided in Supplementary Tables 23 and 24.

Scaphoid shape

A 3D geometric morphometric analysis of the preserved portions of the scaphoid of KNM-ER 101000 was conducted (Extended Data Fig. 5b). Using Stratovan Checkpoint software, surface patches were fit to the radius and capitate articular facets and to the preserved portion of the trapezium–trapezoid facet. Landmark patches (density of 9 × 9) were manually placed using the ‘patches’ option in Stratovan Checkpoint (v.2022.12.16.0419, Stratovan). No patch was placed on the trapezium surface because this region was broken in KNM-ER 101000. Landmarks that were homologous and easily locatable (for example, points where three structures met, maxima of curvature) were treated as conventional landmarks and used as anchors to place the patches. The remainder of the landmarks were treated as sliding semi-landmarks. In total, there were 8 landmarks and 235 sliding semi-landmarks. The sliding semi-landmarks were slid along the surfaces in 3D to minimize the bending energy of a thin-plate spline deformation using the function slider3d() in the R package Morpho (v.2.10)68. Sliding is an iterative process; specimens were relaxed against the Procrustes mean configuration by sliding along tangent planes until a designated threshold distance (the Procrustes distance between the old and new mean) was reached68. After each iteration of the sliding process, the points were projected back onto the surface to avoid the semi-landmarks ‘falling off’ the bone68,69,70. The set of slidden landmarks underwent a generalized Procrustes analysis (GPA) and subsequent principal component analysis (PCA) using the function procSym() in the R package Morpho (v.2.10)68. The procSym() function returns an array of GPA superimposed coordinates of the translated, scaled and rotated landmark configurations for each specimen. A PCA was then performed on the array of GPA superimposed coordinates, which returned a matrix of principal component (PC) scores. The PC scores were plotted using the function ggplot() in the R package ggplot2 (v.3.4.1)71. Point clouds were used to visualize the shape variation along PC axes. Point clouds representing the most negative and positive shapes along the PC axes were generated using plotReftoTarget() in the R package geomorph (v.4.0.4)72,73. Comparative sample details are provided in Supplementary Tables 25 and 26.

Scaphoid and lunate combined shape

A canonical variate analysis of scaphoid and lunate shape (using matched pairs of these carpals) was conducted using angles between articular surfaces and relative surface areas (following the same methods as described above for the trapezoid shape analysis). Comparative sample details are provided in Supplementary Table 27.

Hamate shape

Variables quantifying functional aspects of hamate form were quantified using landmarks placed on 3D surface scans of KNM-ER 101000 and the comparative sample following previously described methods74 and summarized in Supplementary Fig. 4c. Details of the comparative sample are provided in Supplementary Tables 28 and 29.

Radius cross-sectional geometry

The cross-sectional cortical area of the radius of KNM-ER 101000 was measured immediately distal to the radial tuberosity at a level that we estimated to represent 25% of the total physiological length (as defined in a previous study75). The comparative dataset for this analysis consisted of radii from a mixed sex sample of recent cadaveric modern humans (n = 10) housed in the Department of Anatomical Sciences, Stony Brook University, as well as P.troglodytes (n = 18) and Gorilla spp. (n = 24) specimens housed at the American Museum of Natural History (New York City) and the Museum of Comparative Zoology (Harvard University). These comparative specimens were subjected to longitudinal CT scanning using a LightSpeed VCT scanner (GE Healthcare) in the Department of Radiology, Stony Brook University Hospital. The slice thickness was 2.5 mm. Specimens were scanned dry, and a bone-reconstruction algorithm was used. The cross-sectional area of the cortical bone was calculated from DICOM files using the BoneJ plugin76 for ImageJ software (NIH). Each element was first segmented by the BoneJ automated thresholding protocol ‘Optimize Threshold’ to extract the bone phase. Structural properties were then analysed on a DICOM slice that was determined to represent 25% of the physiological length using the ‘Slice Geometry’ function.

Pedal analyses

The size and composition of the extant sample varied across the analyses of different pedal elements. These are described in Supplementary Tables 3843. The fossil hominin data were collected from original specimens housed at the following institutions: the Ditsong National Museum of Natural History; the Evolutionary Studies Institute, University of the Witwatersrand; the National Museum of Ethiopia; and the Turkana Basin Institute, Ileret. We supplemented the fossil data using research-quality casts of specimens housed at the following institutions: the National Museum of Kenya (for example, Koobi Fora specimens) and the National Museum of Tanzania (OH 8). We also used published data on base measurements of fossil hominin metatarsal samples77,78. For most analyses, we visualized distributions of raw values across species combined with box and whisker plots that display summary statistics such as the median, the interquartile range and the range for each sample.

Hallucal proximal phalanx

CT data from the New Mexico Decedent Image Database (NMDID) and Primate Research Institute Computed Tomography (PRICT, Kyoto University) were segmented to produce 3D meshes using ORS Dragonfly software. CT data from the Center for Academic Research and Anthropogeny (CARTA, University of California, San Diego) were used to generate 3D meshes using OsiriX software. The remaining individuals were scanned using a NextEngine HD or an Artec Space Spider scanner. We cleaned each 3D model using Geomagic Wrap software (for example, filling small holes and smoothing meshes generated by CT scanning). We calculated the pPP1 dorsal canting angle as the angle between a least-squares plane fit to the proximal articular surface and a plane fit to the plantar surface defined by three landmarks: the most plantar point on the medial tubercle of the base; the most plantar point on the lateral tubercle of the base; and the most plantar point on the trochlea. We calculated the angle as the inverse cosine of the dot product of the normal vectors of each plane.

Relative pedal phalangeal lengths

We calculated a phalangeal length ratio (pPP1/pPP5) and a pPP5 length ratio (pPP5 length/pPP5 base mediolateral breadth) from linear measurements collected using Mitutoyu sliding calipers.

Non-hallucal pedal proximal phalanx articular angle and shaft curvature

The articular angle method was used to quantify the orientation of the metatarsophalangeal joint surface to enable comparisons with previously published data42. To quantify the shaft curvature, we used ImageJ software to calculate the included angle from three measurements collected on photographs of pPP5 specimens79. The three measurements included the maximum length, the midshaft depth and the projected phalangeal height at the midshaft.

Pedal proximal phalanx shape

We evaluated the morphometric affinities of the pPP5 of KNM-ER 101000 using PCA. The analysis included nine variables: the included angle of curvature; the dorsal canting ratio; the length; the base mediolateral breadth (BML); the base dorsoplantar depth (BDP); the midshaft mediolateral breadth (MSML); the midshaft dorsoplantar depth (MSDP); the trochlea mediolateral breadth (TML); and the trochlea dorsoplantar depth (TDP). The seven linear distances (length, BML, BDP, MSML, MSDP, TML and TDP) were divided by their geometric mean. The dorsal canting ratio was calculated using two linear measurements: the dorsal interarticular length and the plantar interarticular length. The combination of curvature, ratio and geometric mean-standardized lengths required the use of the correlation matrix in the PCA. We used the ‘princomp’ function in R (v.4.4.0).

Metatarsal torsion

We calculated Mt3 torsion using a previously described 3D landmark method80. As previously noted, the CT data from NMDID, PRICT and CARTA were segmented to produce 3D meshes using ORS Dragonfly or OsiriX software. All 3D models were imported into Geomagic Wrap for smoothing and/or cleaning before analysis. We digitized six landmarks on each 3D model: the most plantar point of the proximal articular surface at midline (LM1); the most dorsal point of the proximal articular surface at midline (LM2); the centroid of the proximal articular surface (LM3); the most proximal point of the medial tubercle on the plantar Mt head (LM4); the most proximal point of the lateral tubercle on the plantar Mt head (LM5); and the most dorsal point of the Mt head at midline (LM6). A seventh landmark (LM7) was calculated as the midpoint between LM6 and the midpoint of landmarks LM4 and LM5, which positioned it inside the 3D model near the Mt head. The landmarks were used to define a local coordinate reference frame. LM1 and LM2 were used to define a tarsometatarsal joint vector (TMT). LM3 and LM7 were used to define a proximodistal axis vector (PD). LM4 and LM5 were used to define a mediolateral axis vector (ML). The cross-product of PD and ML vectors was used to define a dorsoplantar axis vector (DP). TMT was projected onto the same plane as DP, and the metatarsal torsion angle was calculated as the rotation of TMT relative to PD using the atan2 function. The resulting angular rotation value was converted from radians to degrees (where 1 radian = 180°/π). For right metatarsals viewed from their proximal ends, a positive torsion value indicates a counterclockwise rotation, whereas a negative torsion angle indicates a clockwise rotation of DP relative to TMT for comparability with previous studies80,81,82,83. Metatarsal torsion angles were calculated using a custom Matlab script.

Metatarsal base ratio

We computed the ratio of Mt3 base dorsoplantar to mediolateral dimensions using linear distances (Mt3 BDP/BML).

Ancestral state reconstruction methods

To reconstruct patterns of hand evolution across the hominin phylogeny, we constructed a character matrix consisting of 20 discrete morphological characteristics across the manus (Supplementary Table 44). The previously proposed characteristics3 served as the starting point for this matrix (Supplementary Table 45). We then coded character states for 6 extant species and 14 fossil taxa when preserved elements permitted the assessment of a given character. In most cases, we based these character codings on fossils that were unequivocally attributed to a taxon (for example, category A in ref. 13). The following samples were exceptions to this criterion: OH 7, which we coded as H.habilis; SK 84 was taken to represent P.robustus; and all Sterkfontein Member 4 fossils were considered to represent A.africanus. KNM-ER 101000 was treated as the sole representative of P.boisei, although it never substantially differed from the character states observed in KNM-ER 47000. The tree topology used for ancestral state reconstructions was based on the most parsimonious tree recovered per a previous study22. Ancestral state reconstructions were conducted individually for each character along the tree using maximum parsimony in Mesquite (v.3.61)84. No character ordering or polarity was assumed a priori.

Reporting summary

Further information on research design is available in the Nature Portfolio Reporting Summary linked to this article.