Extended Data Fig. 9: Myogenic subset pseudotime analysis. | Nature Aging

Extended Data Fig. 9: Myogenic subset pseudotime analysis.

From: Transcriptomic analysis of skeletal muscle regeneration across mouse lifespan identifies altered stem cell states

Extended Data Fig. 9: Myogenic subset pseudotime analysis.

(A-H) Dot Plots of the average log-normalized expression of Pax7 (A), Myf5 (B), Myod1 (C), Myog (D), Mymk (E), Acta1 (F), Cdk1 (G), and Cdk4 (H) in each day post injury (dpi) and pseudotime bin. The size of the circle is the percent of cells in each pseudotime bin for each age and dpi combination. (I) Schematic of newly assigned myogenic IDs (referred to as ‘pseudotime-based myogenic cell state bin’) based on the expression of known myogenic markers in each dpi and pseudotime bin.

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