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Showing 1–50 of 171 results
Advanced filters: Author: Andrea Burke Clear advanced filters
  • This study identifies status dystonicus as a distinct brain state characterized by excessive beta-band activity with implications for the diagnosis and treatment of this poorly known neurological emergency

    • Arjun Balachandar
    • Lindsey M. Vogt
    • George M. Ibrahim
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-15
  • Benefit-cost analyses of climate policies have generated conflicting assessments; as social welfare is affected by regional heterogeneity. Here the authors show that economically optimal pathways are consistent with climate stabilization but are characterized by persistent economic inequalities due to climate damages.

    • Paolo Gazzotti
    • Johannes Emmerling
    • Massimo Tavoni
    ResearchOpen Access
    Nature Communications
    Volume: 12, P: 1-10
  • The underpinnings of a supposed basal ganglia pathway imbalance in dystonia are unknown. Here, the authors unveil exaggerated low frequency coupling in the direct striato-pallidal pathway to reflect dystonic symptoms, which could potentially be used as target for neuromodulation strategies.

    • Roxanne Lofredi
    • Lucia K. Feldmann
    • Andrea A. Kühn
    ResearchOpen Access
    Nature Communications
    Volume: 15, P: 1-8
  • The APOE-ε4 allele is the strongest genetic risk factor for late-onset Alzheimer’s disease, but it is not deterministic. Here, the authors show that common genetic variation changes how APOE-ε4 influences cognition.

    • Alex G. Contreras
    • Skylar Walters
    • Timothy J. Hohman
    ResearchOpen Access
    Nature Communications
    Volume: 17, P: 1-17
  • Many animals display brilliant colors thanks to the precise formation of guanine crystals within specialized organelles. Here, the authors demonstrate that dynamic pH shifts orchestrate this process: an initially acidic lumen stabilizes amorphous, protonated guanine and subsequent alkalinization triggers its crystallization.

    • Zohar Eyal
    • Rachael Deis
    • Dvir Gur
    ResearchOpen Access
    Nature Chemical Biology
    Volume: 22, P: 19-27
  • Controlling crystal growth alignment in wide bandgap low-dimensional perovskites has been a persistent challenge. Here, authors induce vertical crystal growth through the addition of chlorine to precursor solution, giving rise to a record power conversion efficiency of 9.4% for 2 eV bandgap devices.

    • Andrea Zanetta
    • Valentina Larini
    • Giulia Grancini
    ResearchOpen Access
    Nature Communications
    Volume: 15, P: 1-10
  • The addition of molecules on a magnetic film has been known to alter the magnetic properties of the film. Here, through a combination of density function theory calculations, and magnetic force microscopy measurements, Benini and coauthors show the critical importance of long range correlations in the resulting properties of the molecule-decorated magnetic film.

    • Mattia Benini
    • Andrei Shumilin
    • Valentin Alek Dediu
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-11
  • Understanding deregulation of biological pathways in cancer can provide insight into disease etiology and potential therapies. Here, as part of the PanCancer Analysis of Whole Genomes (PCAWG) consortium, the authors present pathway and network analysis of 2583 whole cancer genomes from 27 tumour types.

    • Matthew A. Reyna
    • David Haan
    • Christian von Mering
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-17
  • There’s an emerging body of evidence to show how biological sex impacts cancer incidence, treatment and underlying biology. Here, using a large pan-cancer dataset, the authors further highlight how sex differences shape the cancer genome.

    • Constance H. Li
    • Stephenie D. Prokopec
    • Christian von Mering
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-24
  • Analyses of 2,658 whole genomes across 38 types of cancer identify the contribution of non-coding point mutations and structural variants to driving cancer.

    • Esther Rheinbay
    • Morten Muhlig Nielsen
    • Christian von Mering
    ResearchOpen Access
    Nature
    Volume: 578, P: 102-111
  • In somatic cells the mechanisms maintaining the chromosome ends are normally inactivated; however, cancer cells can re-activate these pathways to support continuous growth. Here, the authors characterize the telomeric landscapes across tumour types and identify genomic alterations associated with different telomere maintenance mechanisms.

    • Lina Sieverling
    • Chen Hong
    • Christian von Mering
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-13
  • With the generation of large pan-cancer whole-exome and whole-genome sequencing projects, a question remains about how comparable these datasets are. Here, using The Cancer Genome Atlas samples analysed as part of the Pan-Cancer Analysis of Whole Genomes project, the authors explore the concordance of mutations called by whole exome sequencing and whole genome sequencing techniques.

    • Matthew H. Bailey
    • William U. Meyerson
    • Christian von Mering
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-27
  • The flagship paper of the ICGC/TCGA Pan-Cancer Analysis of Whole Genomes Consortium describes the generation of the integrative analyses of 2,658 cancer whole genomes and their matching normal tissues across 38 tumour types, the structures for international data sharing and standardized analyses, and the main scientific findings from across the consortium studies.

    • Lauri A. Aaltonen
    • Federico Abascal
    • Christian von Mering
    ResearchOpen Access
    Nature
    Volume: 578, P: 82-93
  • Integrative analyses of transcriptome and whole-genome sequencing data for 1,188 tumours across 27 types of cancer are used to provide a comprehensive catalogue of RNA-level alterations in cancer.

    • Claudia Calabrese
    • Natalie R. Davidson
    • Christian von Mering
    ResearchOpen Access
    Nature
    Volume: 578, P: 129-136
  • Whole-genome sequencing data from more than 2,500 cancers of 38 tumour types reveal 16 signatures that can be used to classify somatic structural variants, highlighting the diversity of genomic rearrangements in cancer.

    • Yilong Li
    • Nicola D. Roberts
    • Christian von Mering
    ResearchOpen Access
    Nature
    Volume: 578, P: 112-121
  • Viral pathogen load in cancer genomes is estimated through analysis of sequencing data from 2,656 tumors across 35 cancer types using multiple pathogen-detection pipelines, identifying viruses in 382 genomic and 68 transcriptome datasets.

    • Marc Zapatka
    • Ivan Borozan
    • Christian von Mering
    ResearchOpen Access
    Nature Genetics
    Volume: 52, P: 320-330
  • Analysis of cancer genome sequencing data has enabled the discovery of driver mutations. Here, as part of the ICGC/TCGA Pan-Cancer Analysis of Whole Genomes (PCAWG) Consortium the authors present DriverPower, a software package that identifies coding and non-coding driver mutations within cancer whole genomes via consideration of mutational burden and functional impact evidence.

    • Shimin Shuai
    • Federico Abascal
    • Christian von Mering
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-12
  • Whole-genome sequencing data for 2,778 cancer samples from 2,658 unique donors across 38 cancer types is used to reconstruct the evolutionary history of cancer, revealing that driver mutations can precede diagnosis by several years to decades.

    • Moritz Gerstung
    • Clemency Jolly
    • Christian von Mering
    ResearchOpen Access
    Nature
    Volume: 578, P: 122-128
  • Some cancer patients first present with metastases where the location of the primary is unidentified; these are difficult to treat. In this study, using machine learning, the authors develop a method to determine the tissue of origin of a cancer based on whole sequencing data.

    • Wei Jiao
    • Gurnit Atwal
    • Christian von Mering
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-12
  • The authors present SVclone, a computational method for inferring the cancer cell fraction of structural variants from whole-genome sequencing data.

    • Marek Cmero
    • Ke Yuan
    • Christian von Mering
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-15
  • Many tumours exhibit hypoxia (low oxygen) and hypoxic tumours often respond poorly to therapy. Here, the authors quantify hypoxia in 1188 tumours from 27 cancer types, showing elevated hypoxia links to increased mutational load, directing evolutionary trajectories.

    • Vinayak Bhandari
    • Constance H. Li
    • Christian von Mering
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-10
  • Multi-omics datasets pose major challenges to data interpretation and hypothesis generation owing to their high-dimensional molecular profiles. Here, the authors develop ActivePathways method, which uses data fusion techniques for integrative pathway analysis of multi-omics data and candidate gene discovery.

    • Marta Paczkowska
    • Jonathan Barenboim
    • Christian von Mering
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-16
  • The characterization of 4,645 whole-genome and 19,184 exome sequences, covering most types of cancer, identifies 81 single-base substitution, doublet-base substitution and small-insertion-and-deletion mutational signatures, providing a systematic overview of the mutational processes that contribute to cancer development.

    • Ludmil B. Alexandrov
    • Jaegil Kim
    • Christian von Mering
    ResearchOpen Access
    Nature
    Volume: 578, P: 94-101
  • In this study the authors consider the structural variants (SVs) present within cancer cases of the ICGC/TCGA Pan-Cancer Analysis of Whole Genomes (PCAWG) Consortium. They report hundreds of genes, including known cancer-associated genes for which the nearby presence of a SV breakpoint is associated with altered expression.

    • Yiqun Zhang
    • Fengju Chen
    • Christian von Mering
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-14
  • Cancers evolve as they progress under differing selective pressures. Here, as part of the ICGC/TCGA Pan-Cancer Analysis of Whole Genomes (PCAWG) Consortium, the authors present the method TrackSig the estimates evolutionary trajectories of somatic mutational processes from single bulk tumour data.

    • Yulia Rubanova
    • Ruian Shi
    • Christian von Mering
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-12
  • Group-IV color centers in diamond show promise for spin-photon interfaces, but precise positioning and activation are challenging. Here the authors combine site-controlled ion implantation with laser annealing and in-situ photoluminescence monitoring to create and tune individual tin vacancy centers in diamond.

    • Xingrui Cheng
    • Andreas Thurn
    • Dorian A. Gangloff
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-12
  • Experimental observations and theoretical analysis provide evidence that the spin polarization of the spin-spiral type II multiferroic NiI2 exhibits p-wave magnetism and its spin chirality is related to ferroelectric polarization, which can be electrically controlled. 

    • Qian Song
    • Srdjan Stavrić
    • Riccardo Comin
    Research
    Nature
    Volume: 642, P: 64-70
  • Fe–N–C materials are a promising alternative to platinum for catalysing the oxygen reduction reaction in acidic polymer fuel cells. Now, a 57Fe Mössbauer study reveals that while these catalysts initially comprise two distinct FeNx sites, a high-spin FeN4C12 and a low- or intermediate-spin FeN4C10, only the latter is durable in operating conditions.

    • Jingkun Li
    • Moulay Tahar Sougrati
    • Frédéric Jaouen
    Research
    Nature Catalysis
    Volume: 4, P: 10-19
  • At the hybrid interface between an organic molecular layer and a metallic magnetic surface, spin-filtering effects may be exploited for the generation of spin polarization. Here, the authors demonstrate a dynamic spin-filtering effect across the Co/Alq3 interface, mediated via a second Alq3layer.

    • Andrea Droghetti
    • Philip Thielen
    • Mirko Cinchetti
    ResearchOpen Access
    Nature Communications
    Volume: 7, P: 1-9
  • Future spintronic devices may exploit spin-orbit interactions, which often emerge from broken symmetries and strongly influence electronic behaviour. Here, the authors evidence the amplification of Rashba coupling by a crystal field that breaks the local inversion symmetry at the Ni site in BaNiS2.

    • David Santos-Cottin
    • Michele Casula
    • Andrea Gauzzi
    ResearchOpen Access
    Nature Communications
    Volume: 7, P: 1-8
  • The presence of toxic lead enables high photoconversion efficiency of perovskite solar cells but poses environmental and human health concerns. Here the authors address the issues by introducing a cost-effective TiO2 absorption layer through a scalable process.

    • Salvatore Valastro
    • Emanuele Smecca
    • Alessandra Alberti
    Research
    Nature Sustainability
    Volume: 6, P: 974-983
  • Fishing has had a profound impact on global reef shark populations, and the absence or presence of sharks is strongly correlated with national socio-economic conditions and reef governance.

    • M. Aaron MacNeil
    • Demian D. Chapman
    • Joshua E. Cinner
    Research
    Nature
    Volume: 583, P: 801-806
  • The search for near-ambient superconductivity in hydrides is hindered by the emergence of metastable phases during sample preparation. Tresca et al. predict that spontaneous formation of H2 molecules in N-doped LuH3 lead to dynamical stabilization, allowing low-temperature superconductivity at ambient pressure.

    • Cesare Tresca
    • Pietro Maria Forcella
    • Gianni Profeta
    ResearchOpen Access
    Nature Communications
    Volume: 15, P: 1-7
  • Integrating electrochemical CO electrolysers with a bioreactor can yield high-value long-chain carbon products, but the electrolytes for the two systems are mismatched. Now, a porous solid electrolyte reactor, which can produce acetate directly in bioelectrolyte, is demonstrated. Direct integration with a bioreactor produces bioplastic from CO via the acetate intermediate.

    • Tae-Ung Wi
    • Yongchao Xie
    • Haotian Wang
    Research
    Nature Synthesis
    Volume: 3, P: 1392-1403
  • X-ray polarimetry observations with the Imaging X-ray Polarimetry Explorer constrain the accretion geometry in an X-ray pulsar and provide evidence for a misalignment of the spin, magnetic and orbital axes in Her X-1.

    • Victor Doroshenko
    • Juri Poutanen
    • Fei Xie
    Research
    Nature Astronomy
    Volume: 6, P: 1433-1443
  • A pulse of ocean acidification is reconstructed from the boron isotope composition of fossilized oysters at the Triassic-Jurassic boundary, implicating ocean acidification from volcanic outgassing as a kill mechanism during the extinction event.

    • Molly Trudgill
    • James W. B. Rae
    • Sarah E. Greene
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-11
  • Hollunder et al. identify networks where deep brain stimulation reduces symptoms for Parkinson’s disease, Tourette’s syndrome, dystonia and obsessive-compulsive disorder. This revealed a fronto-rostral topography that segregates the frontal cortex.

    • Barbara Hollunder
    • Jill L. Ostrem
    • Andreas Horn
    ResearchOpen Access
    Nature Neuroscience
    Volume: 27, P: 573-586
  • The authors analyze rare coding variants in 1990 individuals with congenital kidney anomalies, finding diagnostic variants in 14.1% of cases. They identify two new causal genes, ARID3A and NR6A1, along with 38 candidate genes, providing evidence for shared genetics with other developmental disorders.

    • Hila Milo Rasouly
    • Sarath Babu Krishna Murthy
    • Ali G. Gharavi
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-16