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Showing 1–50 of 215 results
Advanced filters: Author: Ge Shan Clear advanced filters
  • This study reveals that during a series of learning tasks, the macaque brain represents the shared (e.g. the decision strategy) and task-unique information (e.g., sensory inputs) in a near-orthogonal manner, thereby supporting reuse of the shared component to facilitate learning, while remain flexible to changes in specifics.

    • Kaixi Tian
    • Zhiping Zhao
    • Shan Yu
    ResearchOpen Access
    Nature Communications
    P: 1-11
  • Conotoxins are disulfide-rich therapeutic peptides with high affinity and selectivity for ion channels, yet their optimization is hindered by limited sequence diversity and laborious engineering. Here, the authors introduce CreoPep, a deep learning-based generative framework that integrates a progressive masking strategy and an augmentation pipeline that combines physics-based energy screening with temperature-controlled multinomial sampling, rationally designing and generating diverse and potent conotoxin variants.

    • Cheng Ge
    • Han-Shen Tae
    • Rilei Yu
    ResearchOpen Access
    Communications Chemistry
    P: 1-15
  • Enhancing the arsenal of E3 ligases is important for PROTACs development. Here, the authors identify a non-inhibitory aptameric ligand to CRL2ZYG11B E3 ligase, and develop a general, modular, and straightforward aptamer-based PROTAC platform, termed ZATAC, providing insights for untapped E3 ligases.

    • Zhihao Yang
    • Miao Chen
    • Songbo Xie
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-15
  • The authors uncovered the electric-field-induced deformation mechanisms of nanostructured electrodes, elucidating the interaction between the electric field and the electrode material at the atomic scale.

    • Yimeng Li
    • Linghan Xia
    • Guodong Meng
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-11
  • Porous polydimethylsiloxane elastomers produced by phase separation methods often suffer from limited tribological and mechanical properties. Here, the authors describe the synthesis of porous elastomers with borate driven heterogeneous networks, improving tribological properties, with controllable pore structure and mechanical performance.

    • Yuhao Wu
    • Liguo Qin
    • Guangneng Dong
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-13
  • R-loops are DNA-RNA hybrids that can cause genome instability if not properly controlled. Here, the authors show that the RNA helicase Brr2 prevents harmful circRNA-associated R-loops, thereby safeguarding transcription and cell division.

    • Xiaolan Chen
    • Jin You
    • Chuan Huang
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-22
  • A cross-ancestry GWAS meta-analyses of brainstem structures identify 713 associations. It reveals shared/distinct genetic architectures across ancestries/substructures and overlaps with neuropsychiatric disorders and physiological functions.

    • Hui Xue
    • Jilian Fu
    • Yue Wu
    ResearchOpen Access
    Nature Communications
    Volume: 17, P: 1-18
  • Here the authors uncover how a floppy tail in a protein acts as a remote switch, flipping activity on or off by tweaking internal motion, which reveals a powerful new way proteins regulate themselves without direct contact.

    • Tuo Ji
    • Piao Ge
    • Chengdong Huang
    Research
    Nature Structural & Molecular Biology
    Volume: 32, P: 2088-2098
  • Some small mRNA isoforms regulate cellular responses to stress. Here, Li et al. identify UFD1s, a stress responsive micro-RNA that encodes a conserved microprotein that regulates ubiquitination of full length UFD1, promotes autophagy and fatty acid oxidation, and acts to alleviate NASH progression in mice.

    • Xiuzhi Li
    • Xiaolin Wang
    • Liang Chen
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-24
  • This paper shows that desertification combating practices decline incomes of farmers and herders, and China needs to adapt its ecological programmes to address the impacts of climate change and create positive synergies to combat desertification.

    • Xunming Wang
    • Quansheng Ge
    • Fahu Chen
    ResearchOpen Access
    Nature Communications
    Volume: 14, P: 1-9
  • Apple is one of the most important fruit crops. Here, the authors perform deep genome resequencing of 117 diverse accessions and reveal comprehensive models of apple origin, speciation, domestication, and fruit size evolution as well as candidate genes associated with important agronomic traits.

    • Naibin Duan
    • Yang Bai
    • Xuesen Chen
    ResearchOpen Access
    Nature Communications
    Volume: 8, P: 1-11
  • A comprehensive phylogeny and taxonomy for the medically and ecologically important genus Artemisia remain unavailable. Here, the authors combine genomic data with morphological analyses to reconstruct the most comprehensive phylogeny and taxonomy of global Artemisia.

    • Bohan Jiao
    • Meng Wei
    • Tiangang Gao
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-14
  • The blocking layer atop perovskite film cannot completely prevent ion movement due to trade-off with carrier transport. Here, authors develop a composite layer and use poly(N-vinylcarbazole) as the hole transport material, achieving certified steady-state efficiency of 25.7% for stable solar cells.

    • Hongcai Tang
    • Yangzi Shen
    • Qifeng Han
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-8
  • Using two cohorts, Liu, Ge, Xiao, Lu and colleagues perform plasma metabolomics and lipidomics, linking reduced sarcosine to sarcopenia diagnosis. In mice, they demonstrate that sarcosine enhances muscle repair, boosts adipose thermogenesis and preserves muscle mass via macrophage modulation.

    • Yu Liu
    • Meiling Ge
    • Lunzhi Dai
    Research
    Nature Aging
    Volume: 5, P: 1810-1827
  • In a study of antibodies isolated from patients infected with SARS-CoV-2, antibodies that potently neutralized the virus competed with angiotensin-converting enzyme 2 for binding to the receptor-binding domain of the viral spike protein, suggesting that antibodies that disrupt this interaction could be developed to treat SARS-CoV-2 infection.

    • Bin Ju
    • Qi Zhang
    • Linqi Zhang
    Research
    Nature
    Volume: 584, P: 115-119
  • Here, the authors combine structural, binding, mutational in vitro and in vivo assays to characterize neutralizing antibodies derived from IGHV3-53/3-66 against SARS-CoV-2, finding one antibody, named P5A-3C8, to exhibit protective efficacy in a golden Syrian hamster model of infection while showing the emergence of mutations at position 417 of the Spike protein that confer resistance.

    • Qi Zhang
    • Bin Ju
    • Zheng Zhang
    ResearchOpen Access
    Nature Communications
    Volume: 12, P: 1-12
  • β-Hydrogen elimination is a fundamental reaction in palladium catalysis, however, the eliminated β-hydrogen is usually attached to a sp3-carbon. Here, the authors report a palladium-catalyzed cross-coupling reaction involving a β-vinylic hydrogen elimination from an allylic palladium intermediate.

    • Ge Zhang
    • Yi-Kang Song
    • Guo-Qiang Lin
    ResearchOpen Access
    Nature Communications
    Volume: 12, P: 1-10
  • A new artificial intelligence model, DeepSeek-R1, is introduced, demonstrating that the reasoning abilities of large language models can be incentivized through pure reinforcement learning, removing the need for human-annotated demonstrations.

    • Daya Guo
    • Dejian Yang
    • Zhen Zhang
    ResearchOpen Access
    Nature
    Volume: 645, P: 633-638
  • Antibodies against SARS-CoV-2 S protein can provide a treatment strategy for COVID-19. Here, Guo et al. provide the crystal structure of a SARS-CoV2 neutralizing antibody isolated from a convalescent patient and highlight the therapeutic efficacy in a rhesus monkey model of an engineered version with optimized pharmacokinetic and safety profile.

    • Yu Guo
    • Lisu Huang
    • Zihe Rao
    ResearchOpen Access
    Nature Communications
    Volume: 12, P: 1-11
  • Piwi-interacting RNAs (piRNAs) are vital for genome integrity and fertility. Here the authors reveal that spatial clustering of piRNA genes in Caenorhabditis elegans promotes transcription through phase separation and deSUMOylation, uncovering a SUMOylation-regulated mechanism for piRNA production in heterochromatic genomes.

    • Chengming Zhu
    • Xiaoyue Si
    • Shouhong Guang
    Research
    Nature Structural & Molecular Biology
    Volume: 32, P: 1503-1516
  • Here, the authors compare the crystal structures and investigate the neutralization mechanisms of three neutralizing antibodies against SARS-CoV-2 and find that one antibody, P2C-1F11, closely mimics binding of receptor ACE2 and displays the most potent neutralizing activity in vitro, as well as conferring protection against SARS-CoV-2 infection in Ad5-hACE2-sensitized mice.

    • Jiwan Ge
    • Ruoke Wang
    • Linqi Zhang
    ResearchOpen Access
    Nature Communications
    Volume: 12, P: 1-9
  • Little is known about the regulation of RNA interference (RNAi). Shan et al. constructed a reporter system to monitor RNAi activity and identified a small molecule that increases RNAi by facilitating the interaction between small RNAs and a protein involved in small RNA loading and processing.

    • Ge Shan
    • Yujing Li
    • Peng Jin
    Research
    Nature Biotechnology
    Volume: 26, P: 933-940
  • This study identifies the evolutionarily conserved Exportin 4 as an essential regulator in the nuclear export of circRNAs. Defective circRNA export results in R-loop formation and DNA damage in cells, as well as testis and neurological defects in mice.

    • Liang Chen
    • Yucong Wang
    • Ge Shan
    ResearchOpen Access
    Nature Communications
    Volume: 13, P: 1-18
  • While Bell inequalities have been violated several times—mostly in photonic systems—their violations within particle physics experiments are less explored. Here, the BESIII Collaboration showcases Bell-violating nonlocal correlations between entangled hyperon pairs.

    • M. Ablikim
    • M. N. Achasov
    • J. Zu
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-9
  • The identification of a new subclass of circular RNAs that are predominantly nuclear and promote transcription of their parental genes reveals a new regulatory function for these noncoding RNAs.

    • Zhaoyong Li
    • Chuan Huang
    • Ge Shan
    Research
    Nature Structural & Molecular Biology
    Volume: 22, P: 256-264
  • Mobility impairment reduces autonomy and social participation. Here, the authors discuss how wearable technologies are transforming assisted mobility towards more adaptive, intuitive, and user-centered solutions.

    • Shuo Gao
    • Jianan Chen
    • Hubin Zhao
    ReviewsOpen Access
    Nature Communications
    Volume: 16, P: 1-17
  • Here the authors experimentally realize the electrical tuning of branched flow of light in nematic liquid crystals. The statistical properties and the polarization effect of the branched flow of light in the film are systematically studied adding fundamental insights on branched flow of light.

    • Shan-shan Chang
    • Ke-Hui Wu
    • Jin-hui Chen
    ResearchOpen Access
    Nature Communications
    Volume: 15, P: 1-8
  • The authors identify nanobodies from immunized alpaca with broadly neutralizing activity against SARS-CoV-1, SARS-CoV-2 variants, and major sarbecoviruses. One representative nanobody binds to a highly conserved epitope on RBD and protects K18-hACE2 mice from Omicron and Delta infection.

    • Mingxi Li
    • Yifei Ren
    • Linqi Zhang
    ResearchOpen Access
    Nature Communications
    Volume: 13, P: 1-17
  • The authors introduce a loss-enhanced magneto-optical effect and sublinearly amplify the frequency response of a non-Hermitian optical cavity under different background magnetic fields. This effect is exploited to detect subtle magnetic field variations against a strong background with enhanced system response and sensitivity.

    • Ya-Ping Ruan
    • Jiang-Shan Tang
    • Keyu Xia
    Research
    Nature Photonics
    Volume: 19, P: 109-115
  • The semileptonic decay channels of the Λc baryon can give important insights into weak interaction, but decay into a neutron, positron and electron neutrino has not been reported so far, due to difficulties in the final products’ identification. Here, the BESIII Collaboration reports its observation in e+e- collision data, exploiting machine-learning-based identification techniques.

    • M. Ablikim
    • M. N. Achasov
    • J. Zu
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-12
  • Here the authors characterize a monoclonal antibody from a COVID-19 convalescent patient that interferes with SARS-CoV-2 spike binding to ACE2 and has prophylactic and therapeutic activity in non-human primates. Antibody-dependent enhancement of infection is prevented by mutating the Fc region of the antibody.

    • Shuang Wang
    • Yun Peng
    • Datao Liu
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-8
  • Reducing the radiation dose for medical CT scans can provide a less invasive imaging method, but requires a method for reconstructing an image up to the image quality from a full-dose scan. In this article, Wang and colleagues show that the deep learning approach, combined with the feedback from radiologists, produces higher quality reconstructions than or similar to that using the current commercial methods.

    • Hongming Shan
    • Atul Padole
    • Ge Wang
    Research
    Nature Machine Intelligence
    Volume: 1, P: 269-276
  • The oxygen reduction reaction (ORR) is limited by the scaling relationship in the conventional oxygen associative pathway. In this study, single p-block atoms and interstitial H are incorporated into Pd metallenes favoring the direct dissociation mechanism, leading to high alkaline ORR performance.

    • Yu Qiu
    • Mingzi Sun
    • Xiaoqiang Cui
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-13