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Showing 1–50 of 129 results
Advanced filters: Author: Jose R. Davila Clear advanced filters
  • This study examines long-term changes in species richness across tropical forests in the Andes and Amazon. Hotter, drier and more seasonal forests in the eastern and southern Amazon are losing species, while Northern Andean forests are accumulating species, acting as a refuge for climate-displaced species.

    • B. Fadrique
    • F. Costa
    • O. L. Phillips
    ResearchOpen Access
    Nature Ecology & Evolution
    P: 1-14
  • Analysis combining multiple global tree databases reveals that whether a location is invaded by non-native tree species depends on anthropogenic factors, but the severity of the invasion depends on the native species diversity.

    • Camille S. Delavaux
    • Thomas W. Crowther
    • Daniel S. Maynard
    ResearchOpen Access
    Nature
    Volume: 621, P: 773-781
  • Geospatial estimates of the prevalence of anemia in women of reproductive age across 82 low-income and middle-income countries reveals considerable heterogeneity and inequality at national and subnational levels, with few countries on track to meet the WHO Global Nutrition Targets by 2030.

    • Damaris Kinyoki
    • Aaron E. Osgood-Zimmerman
    • Simon I. Hay
    ResearchOpen Access
    Nature Medicine
    Volume: 27, P: 1761-1782
  • Analysing >1,700 inventory plots from the Amazon Tree Diversity Network, the authors show that the majority of Amazon tree species can occupy floodplains and that patterns of species turnover are closely linked to regional flood patterns.

    • John Ethan Householder
    • Florian Wittmann
    • Hans ter Steege
    ResearchOpen Access
    Nature Ecology & Evolution
    Volume: 8, P: 901-911
  • Inventory data from more than 1 million trees across African, Amazonian and Southeast Asian tropical forests suggests that, despite their high diversity, just 1,053 species, representing a consistent ~2.2% of tropical tree species in each region, constitute half of Earth’s 800 billion tropical trees.

    • Declan L. M. Cooper
    • Simon L. Lewis
    • Stanford Zent
    ResearchOpen Access
    Nature
    Volume: 625, P: 728-734
  • Wood density is a key control on tree biomass, and understanding its spatial variation improves estimates of forest carbon stock. Sullivan et al. measure >900 forest plots to quantify wood density and produce high resolution maps of its variation across South American tropical forests.

    • Martin J. P. Sullivan
    • Oliver L. Phillips
    • Joeri A. Zwerts
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-12
  • A global research network monitoring the Amazon for 30 years reports in this study that tree size increased by 3% each decade.

    • Adriane Esquivel-Muelbert
    • Rebecca Banbury Morgan
    • Oliver L. Phillips
    ResearchOpen Access
    Nature Plants
    Volume: 11, P: 2016-2025
  • Fine-scale geospatial mapping of overweight and wasting (two components of the double burden of malnutrition) in 105 LMICs shows that overweight has increased from 5.2% in 2000 to 6.0% in children under 5 in 2017. Although overall wasting decreased over the same period, most countries are not on track to meet the World Health Organization’s Global Nutrition Target of <5% in over half of LMICs by 2025.

    • Damaris K. Kinyoki
    • Jennifer M. Ross
    • Simon I. Hay
    ResearchOpen Access
    Nature Medicine
    Volume: 26, P: 750-759
  • Tree mortality has been shown to be the dominant control on carbon storage in Amazon forests, but little is known of how and why Amazon forest trees die. Here the authors analyse a large Amazon-wide dataset, finding that fast-growing species face greater mortality risk, but that slower-growing individuals within a species are more likely to die, regardless of size.

    • Adriane Esquivel-Muelbert
    • Oliver L. Phillips
    • David Galbraith
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-11
  • Species’ traits and environmental conditions determine the abundance of tree species across the globe. Here, the authors find that dominant tree species are taller and have softer wood compared to rare species and that these trait differences are more strongly associated with temperature than water availability.

    • Iris Hordijk
    • Lourens Poorter
    • Thomas W. Crowther
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-15
  • During the Last Ice Age, Neanderthals used a small cave in the Iberian Peninsula to accumulate the crania of large ungulates (bison, aurochs, red deer and rhinoceroses), some associated with small hearths. This seems to have been a symbolic practice.

    • Enrique Baquedano
    • Juan L. Arsuaga
    • Tom Higham
    ResearchOpen Access
    Nature Human Behaviour
    Volume: 7, P: 342-352
  • A high-resolution, global atlas of mortality of children under five years of age between 2000 and 2017 highlights subnational geographical inequalities in the distribution, rates and absolute counts of child deaths by age.

    • Roy Burstein
    • Nathaniel J. Henry
    • Simon I. Hay
    ResearchOpen Access
    Nature
    Volume: 574, P: 353-358
  • Data from a variety of sources—including satellite, climate and soil data, as well as field-collected information on plant traits—are pooled and analysed to map the functional diversity of tropical forest canopies globally.

    • Jesús Aguirre-Gutiérrez
    • Sami W. Rifai
    • Yadvinder Malhi
    ResearchOpen Access
    Nature
    Volume: 641, P: 129-136
  • The authors analyse tree responses to an extreme heat and drought event across South America to understand long-term climate resistance. While no more sensitive to this than previous lesser events, forests in drier climates showed the greatest impacts and thus vulnerability to climate extremes.

    • Amy C. Bennett
    • Thaiane Rodrigues de Sousa
    • Oliver L. Phillips
    ResearchOpen Access
    Nature Climate Change
    Volume: 13, P: 967-974
  • Most Amazon tree species are rare but a small proportion are common across the region. The authors show that different species are hyperdominant in different size classes and that hyperdominance is more phylogenetically restricted for larger canopy trees than for smaller understory ones.

    • Frederick C. Draper
    • Flavia R. C. Costa
    • Christopher Baraloto
    Research
    Nature Ecology & Evolution
    Volume: 5, P: 757-767
  • Tree species turnover across Amazonian forests unveils sharp floristic transitional zones, that are linked with changes in soil fertility and climate.

    • Bruno Garcia Luize
    • Hanna Tuomisto
    • Hans ter Steege
    ResearchOpen Access
    Communications Biology
    Volume: 7, P: 1-15
  • Using 13 functional traits we characterize the Amazonian trees and the communities they form. Amazonian tree communities are distributed along a fast-slow-spectrum. This results in clear differences in traits among these forests, as well as their biomass and biomass productivity.

    • Hans ter Steege
    • Lourens Poorter
    • Georgia Pickavance
    ResearchOpen Access
    Communications Biology
    Volume: 8, P: 1-17
  • Although progress in the coverage of routine measles vaccination in children in low- and middle-income countries was made during 2000–2019, many countries remain far from the goal of 80% coverage in all districts by 2019.

    • Alyssa N. Sbarra
    • Sam Rolfe
    • Jonathan F. Mosser
    ResearchOpen Access
    Nature
    Volume: 589, P: 415-419
  • Analysis of HbA1c and FPG levels across 117 population-based studies demonstrates regional variation in prevalence of previously undiagnosed screen-detected diabetes using one or both measures and suggests that use of elevated FPG alone could underestimate diabetes prevalence in low- and middle-income countries.

    • Bin Zhou
    • Kate E. Sheffer
    • Majid Ezzati
    ResearchOpen Access
    Nature Medicine
    Volume: 29, P: 2885-2901
  • Examining drivers of the latitudinal biodiversity gradient in a global database of local tree species richness, the authors show that co-limitation by multiple environmental and anthropogenic factors causes steeper increases in richness with latitude in tropical versus temperate and boreal zones.

    • Jingjing Liang
    • Javier G. P. Gamarra
    • Cang Hui
    Research
    Nature Ecology & Evolution
    Volume: 6, P: 1423-1437
  • Wood density is an important plant trait. Data from 1.1 million forest inventory plots and 10,703 tree species show a latitudinal gradient in wood density, with temperature and soil moisture explaining variation at the global scale and disturbance also having a role at the local level.

    • Lidong Mo
    • Thomas W. Crowther
    • Constantin M. Zohner
    ResearchOpen Access
    Nature Ecology & Evolution
    Volume: 8, P: 2195-2212
  • From 1980 to 2018, the levels of total and non-high-density lipoprotein cholesterol increased in low- and middle-income countries, especially in east and southeast Asia, and decreased in high-income western countries, especially those in northwestern Europe, and in central and eastern Europe.

    • Cristina Taddei
    • Bin Zhou
    • Majid Ezzati
    ResearchOpen Access
    Nature
    Volume: 582, P: 73-77
  • Whole-genome sequencing and mutational signature analysis of 265 head and neck cancer samples collected from eight different countries provide insight into the vital contribution of tobacco smoke in disease etiology.

    • Laura Torrens
    • Sarah Moody
    • Sandra Perdomo
    ResearchOpen Access
    Nature Genetics
    Volume: 57, P: 884-896
  • Analysis of ground-sourced and satellite-derived models reveals a global forest carbon potential of 226 Gt outside agricultural and urban lands, with a difference of only 12% across these modelling approaches.

    • Lidong Mo
    • Constantin M. Zohner
    • Thomas W. Crowther
    ResearchOpen Access
    Nature
    Volume: 624, P: 92-101
  • An application-specific integrated circuit that is fabricated in 130-nm foundry complementary metal–oxide–semiconductor technology, and uses stochastic bit sequences read from an adjacent voltage-controlled magnetic tunnel junction chip, can be used to solve integer factorization problems.

    • Christian Duffee
    • Jordan Athas
    • Pedram Khalili Amiri
    Research
    Nature Electronics
    Volume: 8, P: 784-793
  • The Amazon rainforest is dominated by relatively few tree species, yet the degree to which this hyperdominance influences carbon cycling remains unknown. Here, the authors analyse 530 forest plots and show that ∼1% of species are responsible for 50% of the aboveground carbon storage and productivity.

    • Sophie Fauset
    • Michelle O. Johnson
    • Oliver L. Phillips
    ResearchOpen Access
    Nature Communications
    Volume: 6, P: 1-9
  • Analyses of the proportions of individuals who have completed key levels of schooling across all low- and middle-income countries from 2000 to 2017 reveal inequalities across countries as well as within populations.

    • Nicholas Graetz
    • Lauren Woyczynski
    • Simon I. Hay
    ResearchOpen Access
    Nature
    Volume: 577, P: 235-238
  • APOE4 is associated with widespread gene expression changes across all cell types of the human brain, altered cholesterol homeostasis and transport signalling pathways, and decreased myelination in the brain.

    • Joel W. Blanchard
    • Leyla Anne Akay
    • Li-Huei Tsai
    Research
    Nature
    Volume: 611, P: 769-779
  • Inventory data from 90 lowland Amazonian forest plots and a phylogeny of 526 angiosperm genera were used to show that taxonomic and phylogenetic diversity are both predictive of wood productivity but not of biomass variation.

    • Fernanda Coelho de Souza
    • Kyle G. Dexter
    • Timothy R. Baker
    Research
    Nature Ecology & Evolution
    Volume: 3, P: 1754-1761
  • Dissecting the cellular heterogeneity embedded in single-cell transcriptomic data is challenging. Here, the authors introduce the concept of multiresolution cell-state decomposition as a practical approach to simultaneously capture both fine- and coarse-grain patterns of variability.

    • Shahin Mohammadi
    • Jose Davila-Velderrain
    • Manolis Kellis
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-14
  • “Genome-wide association studies have identified variants associated with age-related macular degeneration (AMD); however, other than identifying this as a complement mediated inflammatory disease, little biology has emerged. Here, authors used novel computational tools from the Broad Institute to examine the relationship of single-cell transcriptomics and genome-wide association studies (GWAS) in the human retina and demonstrate that GWAS-associated risk alleles associated with AMD are enriched in glia and vascular cells and that human retinal glia are more diverse than previously thought

    • Madhvi Menon
    • Shahin Mohammadi
    • Brian P. Hafler
    ResearchOpen Access
    Nature Communications
    Volume: 10, P: 1-9
  • Single-cell transcriptomics from 48 individuals with varying degrees of Alzheimer’s disease pathology demonstrates that gene-expression changes in Alzheimer’s disease are both cell-type specific and shared, and that transcriptional responses show sexual dimorphism.

    • Hansruedi Mathys
    • Jose Davila-Velderrain
    • Li-Huei Tsai
    Research
    Nature
    Volume: 570, P: 332-337
  • A regional atlas of the ageing human brain—spanning six distinct anatomical regions from individuals with and without Alzheimer’s dementia—provides insights into cellular vulnerability, response and resilience to Alzheimer’s disease pathology

    • Hansruedi Mathys
    • Carles A. Boix
    • Manolis Kellis
    ResearchOpen Access
    Nature
    Volume: 632, P: 858-868
  • Loss-of-function variants in thyroid hormone transporter MCT8 cause a neurodevelopmental and metabolic disorder. Here the authors identify genotype-phenotype relationships, advance insights in MCT8 (dys)function and create a pathogenicity-severity variant classifier.

    • Stefan Groeneweg
    • Ferdy S. van Geest
    • W. Edward Visser
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-21
  • Aß are extracellular deposits relevant in Alzheimer’s disease (AD). This study shows that Aß plaques are hubs of endothelial disassembly that induce non-productive angiogenesis. This process is aided by the microglia and unchained by reduced presenilin function, a trait of AD, in endothelial cells.

    • Maria I. Alvarez-Vergara
    • Alicia E. Rosales-Nieves
    • Alberto Pascual
    ResearchOpen Access
    Nature Communications
    Volume: 12, P: 1-16