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Showing 1–50 of 942 results
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  • Epithelial cells that line the gut secrete complex glycoproteins that form a mucus layer to protect the gut wall from enteric pathogens. Here, the authors provide a comprehensive characterisation of endo-acting glycoside hydrolases expressed by mucin-degrading members of the microbiome that are able to cleave the O-glycan chains of a range of different animal and human mucins.

    • Lucy I. Crouch
    • Marcelo V. Liberato
    • David N. Bolam
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-13
  • Enzymatic Diels–Alder reactions are of high synthetic interest, but mechanistic insights remain scarce. Now, a structure of the Diels–Alderase CghA in complex with its product is reported, a catalytic mechanism proposed and the enzyme is engineered to form the energetically disfavoured exo adduct.

    • Michio Sato
    • Shinji Kishimoto
    • Kenji Watanabe
    Research
    Nature Catalysis
    Volume: 4, P: 223-232
  • Three-body low-energy s-wave states play an important role in few-body physics and associated universal phenomena, yet their experimental observation in nuclear system has been elusive. Here, the authors identify the three-body s-wave properties in neutron-rich 10He nuclei with improved statistics and sensitivities.

    • Y. L. Sun
    • Y. Kikuchi
    • T. Uesaka
    ResearchOpen Access
    Nature Communications
    P: 1-9
  • Natural products populate areas of chemical space not occupied by average synthetic molecules. Here, an analysis of more than 180,000 natural product structures results in a library of 2,000 natural-product-derived fragments, which resemble the properties of the natural products themselves and give access to novel inhibitor chemotypes.

    • Björn Over
    • Stefan Wetzel
    • Herbert Waldmann
    Research
    Nature Chemistry
    Volume: 5, P: 21-28
  • Endocannabinoids are involved in regulating neural progenitor cell proliferation, as well as neuronal and glial differentiation. In this Review, Maccarrone, Harkany and colleagues discuss mechanisms of endocannabinoid signalling, the action of plant cannabinoids in the foetal brain, and their exploitation to modulate diseases associated with defective cell cycle control, particularly cancer.

    • Mauro Maccarrone
    • Manuel Guzmán
    • Tibor Harkany
    Reviews
    Nature Reviews Neuroscience
    Volume: 15, P: 786-801
  • Cycloaddition reactions are among the most useful reactions in chemical synthesis, but biosynthetic enzymes with 2 + 2 cyclase activity have yet to be observed. Now it is shown that a β-barrel-fold protein catalyses competitive 2 + 2 and 4 + 2 cycloaddition reactions. This protein can be engineered to preferentially produce the exo-2 + 2, exo-4 + 2 or endo-4 + 2 product.

    • Hongbo Wang
    • Yike Zou
    • K. N. Houk
    Research
    Nature Chemistry
    Volume: 15, P: 177-184
    • N. Pattabiraman
    • Shashidhar N. Rao
    • V. Sasisekharan
    Research
    Nature
    Volume: 284, P: 187-189
  • Dynamic S–S bonds have been leveraged in a variety of applications. Now trisulfides have been found to undergo rapid and spontaneous S–S metathesis in polar aprotic solvents. A mechanistic investigation of this unusual reaction enabled applications in natural product modification, dynamic combinatorial library synthesis and chemically recyclable polymers.

    • Harshal D. Patel
    • Alfrets D. Tikoalu
    • Justin M. Chalker
    Research
    Nature Chemistry
    P: 1-10
  • CD1a presents a broad repertoire of lipid-based antigens. Rossjohn and colleagues show that the TCR docks over CD1a in a manner that precludes contact with permissive antigens, while nonpermissive antigens disrupt the TCR-CD1a contact.

    • Richard W Birkinshaw
    • Daniel G Pellicci
    • Jamie Rossjohn
    Research
    Nature Immunology
    Volume: 16, P: 258-266
  • The [1,2]-Wittig rearrangement of allylic ethers is traditionally considered to proceed via formation and recombination of radical pairs. Now it has been shown that an alternative reaction cascade, involving initial enantioselective [2,3]-rearrangement followed by base-promoted anionic fragmentation–recombination that proceeds with high enantiospecificity, allows a catalytic enantioselective [1,2]-Wittig process.

    • Tengfei Kang
    • Justin O’Yang
    • Andrew D. Smith
    ResearchOpen Access
    Nature Chemistry
    P: 1-10
  • Stratified medicine promises to tailor treatment for individual patients, however it remains a major challenge to leverage genetic risk data to aid patient stratification. Here the authors introduce an approach to stratify individuals based on the aggregated impact of their genetic risk factor profiles on tissue-specific gene expression levels, and highlight its ability to identify biologically meaningful and clinically actionable patient subgroups, supporting the notion of different patient ‘biotypes’ characterized by partially distinct disease mechanisms.

    • Lucia Trastulla
    • Georgii Dolgalev
    • Michael J. Ziller
    ResearchOpen Access
    Nature Communications
    Volume: 15, P: 1-28
  • Biological sex affects all aspects of animal physiology. Using the model C. elegans, the authors show that metabolomes are highly sex-specific and include a vast space of yet unidentified metabolites that may control development and lifespan.

    • Russell N. Burkhardt
    • Alexander B. Artyukhin
    • Frank C. Schroeder
    ResearchOpen Access
    Nature Communications
    Volume: 14, P: 1-15
  • Ndeh et al. show that a genetic locus in the human gut bacterium, Bacteroides thetaiotaomicron, encodes a combination of glycosidases, a glycoprotease and a kinase enabling it to process and metabolise O-glycoproteins and the core mucin O-glycan sugar N-acetylgalactosamine.

    • Didier A. Ndeh
    • Sirintra Nakjang
    • David N. Bolam
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-20
  • Metastatic clear cell renal cell carcinoma has a poor prognosis. Here, the authors use single cell RNA-seq to show a distinct gene expression signature in the primary tumour of metastatic patients, and highlights immune cell receptor interactions as potential therapeutic targets.

    • Adele M. Alchahin
    • Shenglin Mei
    • Ninib Baryawno
    ResearchOpen Access
    Nature Communications
    Volume: 13, P: 1-15
  • This study presents a living systematic review and open-data meta-analytic database from 15 randomized controlled trials examining the effects of psilocybin treatment on depressive symptoms. Existing evidence suggests that psilocybin treatment alleviates depressive symptoms.

    • S. Parker Singleton
    • Brooke L. Sevchik
    • Theodore D. Satterthwaite
    Research
    Nature Mental Health
    P: 1-11
  • Stereoselective carbon-carbon bond formation via palladium-catalyzed asymmetric allylic alkylation is important to access chiral natural products but commonly used catalyst systems often require high loadings or specific preactivation protocols. Here, the authors report several chiral single-component Pd(0) precatalysts that are active at low loadings for a variety of asymmetric allylic alkylation reactions.

    • Jingjun Huang
    • Thomas Keenan
    • David C. Leitch
    ResearchOpen Access
    Nature Communications
    Volume: 14, P: 1-12
  • Preliminary clinical trials suggest that ibogaine and its active metabolite noribogaine have powerful anti-addictive properties, Now, a strategy for the scalable, asymmetric total synthesis of ibogaine has been developed that also provides access to iboga analogues. Biological testing identified a psychoplastogenic iboga analogue that is a potent modulator of the serotonin transporter.

    • Rishab N. Iyer
    • David Favela
    • David E. Olson
    Research
    Nature Chemistry
    Volume: 17, P: 412-420
  • Non-covalent and covalent chemistry can be controlled by using synthetic tools, such as templates. However, selective multicomponent self-assembly remains challenging because of the many kinetic intermediates with trap-state abilities, hampering access to desired products. Now exo-templating via pseudorotaxane formation has been shown to reduce pathway complexity in the multicomponent self-assembly of M12L24 nanospheres.

    • T. Bouwens
    • E. O. Bobylev
    • J. N. H. Reek
    Research
    Nature Chemistry
    Volume: 17, P: 1067-1075
  • In Bacteroidetes, SusCD complexes mediate uptake of large nutrients across the outer membrane. SusCD structures in the apo state and in complex with β2,6 fructo-oligosaccharides reveal several substrate molecules in the binding cavity and suggest details of the pedal bin mechanism employed in glycan import.

    • Declan A. Gray
    • Joshua B. R. White
    • Bert van den Berg
    ResearchOpen Access
    Nature Communications
    Volume: 12, P: 1-14
  • Meta-analyses of genome-wide association studies for endometriosis identify 49 distinct association signals. Fine-mapping of causal variants explores functional effects across various tissues. Genetic correlations between endometriosis and other pain conditions are also highlighted.

    • Nilufer Rahmioglu
    • Sally Mortlock
    • Krina T. Zondervan
    Research
    Nature Genetics
    Volume: 55, P: 423-436
  • The human gut microbiota helps us to degrade complex dietary carbohydrates such as xylan and, in turn, the carbohydrate breakdown products control the structure of the microbiota. Here the authors characterize the xylan-degrading apparatus of a key member of the gut microbiota, Bacteroides ovatus.

    • Artur Rogowski
    • Jonathon A. Briggs
    • David N. Bolam
    ResearchOpen Access
    Nature Communications
    Volume: 6, P: 1-16
  • A de novo designed zinc-binding protein has been converted into a highly active, stereoselective catalyst for a hetero-Diels–Alder reaction. Design and directed evolution were used to effectively harness Lewis acid catalysis and create an enzyme more proficient than other reported Diels–Alderases.

    • Sophie Basler
    • Sabine Studer
    • Donald Hilvert
    Research
    Nature Chemistry
    Volume: 13, P: 231-235
  • Potential toxicity from cationic moieties and limited organ tropism are two challenges faced by current mRNA delivery vehicles. Here, authors develop non-cationic, highly biocompatible metal–organic nanoparticles that enable robust mRNA expression in vivo with tunable organ tropism.

    • Yuang Gu
    • Jingqu Chen
    • Frank Caruso
    ResearchOpen Access
    Nature Communications
    Volume: 15, P: 1-15
  • CRISPR base editing enables the precise introduction of single-nucleotide mutations in the genome. Here, authors generated new adenine/cytosine base editor dataset and proposed a deep-learning model CRISPRon-BE for base editor efficiency prediction, thereby enhancing base editing applications.

    • Ying Sun
    • Kunli Qu
    • Jan Gorodkin
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-9
  • Genomic analyses applied to 14 childhood- and adult-onset psychiatric disorders identifies five underlying genomic factors that explain the majority of the genetic variance of the individual disorders.

    • Andrew D. Grotzinger
    • Josefin Werme
    • Jordan W. Smoller
    ResearchOpen Access
    Nature
    Volume: 649, P: 406-415
  • LepI is an S-adenosylmethionine-dependent pericyclase that catalyses the dehydration, hetero-Diels–Alder reaction and retro-Claisen rearrangement reactions that occur in the formation of the 2-pyridone natural product leporin C. Now, the mechanistic details that underpin this range of catalytic reactions have been uncovered from the crystal structures of LepI and LepI in complex with ligands.

    • Yujuan Cai
    • Yang Hai
    • Yi Tang
    Research
    Nature Chemistry
    Volume: 11, P: 812-820
  • [10]annulene derivatives are typically non-planar and non-aromatic, with aromatic planar variants suffering from kinetic instability. Now, the synthesis of a planar and aromatic dehydro[10]annulene featuring a fused cyclopropane and an internal alkyne is reported. The resulting hydrocarbon is bench stable and can be stored for extended periods of time.

    • Karnjit Parmar
    • Christa S. Blaquiere
    • Michel Gravel
    Research
    Nature Synthesis
    Volume: 1, P: 696-700
  • Periselective catalytic asymmetric cross-Diels–Alder reactions between two different conjugated dienes remain underdeveloped. Now, the selectivity challenges are overcome in such a reaction of electron-poor 2-pyrones and unactivated conjugated dienes, and an ambimodal transition state is identified.

    • Meng-Meng Xu
    • Limin Yang
    • Quan Cai
    Research
    Nature Catalysis
    Volume: 4, P: 892-900
  • Fatty acid desaturation is central to metazoan lipid metabolism. Here, using C. elegans as a model, the authors show that both endogenous and microbiota-dependent small molecule signals converge to promote lipid desaturation via the nuclear receptor NHR-49/PPARα.

    • Bennett W. Fox
    • Maximilian J. Helf
    • Frank C. Schroeder
    ResearchOpen Access
    Nature Communications
    Volume: 15, P: 1-15
  • Alkenes are essential functional groups in organic chemistry, featuring well-defined geometries and bond orders of 2. In this study, cubene and 1,7-quadricyclene are calculated to possess unusual hyperpyramidalized geometries and low alkene bond orders near 1.5. Their resultant high reactivities ultimately permit access to intricate scaffolds and new chemical space.

    • Jiaming Ding
    • Sarah A. French
    • Neil K. Garg
    ResearchOpen Access
    Nature Chemistry
    P: 1-10
  • This study demonstrates the capability of deep learning protein design models in generating functionally validated β-strand pairing interfaces, expanding the structural diversity of de novo binding proteins and accessible target surfaces.

    • Isaac Sappington
    • Martin Toul
    • David Baker
    ResearchOpen Access
    Nature Communications
    Volume: 17, P: 1-15
  • Rossi and colleagues assemble an in vitro enzymatic pipeline using enzymes from distinct domains of life to recapitulate eukaryotic N-glycosylation. This work advances the synthesis of bespoke glycopeptides with biomedical and biotechnological applications.

    • Lorenzo Rossi
    • J. Andrew N. Alexander
    • Kaspar P. Locher
    ResearchOpen Access
    Nature Communications
    Volume: 17, P: 1-16
  • Human gut bacteria can degrade arabinoxylans, polysaccharides found in dietary fiber. Here, Pereira et al. identify a bacterial gene cluster encoding esterases for degradation of complex arabinoxylans. The action of these enzymes results in accumulation of ferulic acid, a phenolic compound with antioxidative and immunomodulatory properties.

    • Gabriel V. Pereira
    • Ahmed M. Abdel-Hamid
    • Isaac Cann
    ResearchOpen Access
    Nature Communications
    Volume: 12, P: 1-21
  • The variability in clinical outcomes of SARS-CoV-2 infection is partly due to deficiencies in production or response to type I interferons (IFN). Here, the authors describe a FIP200-dependent lysosomal degradation pathway, independent of canonical autophagy and type I IFN, that restricts SARS-CoV-2 replication, offering insights into critical COVID-19 pneumonia mechanisms.

    • Lili Hu
    • Renee M. van der Sluis
    • Trine H. Mogensen
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-23