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Showing 51–100 of 3785 results
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  • Topoisomerases resolve topological DNA stress via double-strand breaks and are established targets of cancer chemotherapies. Here, the authors link genomic binding of TOP2B with localized mutational processes in cancer genomes that include prominent driver genes and translocation hotspots.

    • Liis Uusküla-Reimand
    • Christian A. Lee
    • Jüri Reimand
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-19
  • Combining high-resolution mapping of foliar and herbivore faecal sodium concentrations across Africa, the authors show that plant-derived sodium availability constrains megaherbivore densities at a continental scale.

    • Andrew J. Abraham
    • Gareth P. Hempson
    • Christopher E. Doughty
    Research
    Nature Ecology & Evolution
    Volume: 10, P: 105-116
  • Hutchinson-Gilford Progeria Syndrome is characterized by premature aging with cardiovascular disease being the main cause of death. Here the authors show that inhibition of the NAT10 enzyme enhances cardiac function and fitness, and reduces age-related phenotypes in a mouse model of premature aging.

    • Gabriel Balmus
    • Delphine Larrieu
    • Stephen P. Jackson
    ResearchOpen Access
    Nature Communications
    Volume: 9, P: 1-14
  • Species’ traits and environmental conditions determine the abundance of tree species across the globe. Here, the authors find that dominant tree species are taller and have softer wood compared to rare species and that these trait differences are more strongly associated with temperature than water availability.

    • Iris Hordijk
    • Lourens Poorter
    • Thomas W. Crowther
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-15
  • Here the authors explore dynamic connectivity associated with rumination in a large adolescent cohort, revealing that adult models do not generalize, while exploratory analyses suggest that variability in default-mode network connections may predict rumination, highlighting challenges in understanding depression risk factors.

    • Isaac N. Treves
    • Madelynn S. Park
    • Christian A. Webb
    Research
    Nature Mental Health
    Volume: 3, P: 1407-1416
  • GRX-810, an oxide dispersion strengthened alloy, shows excellent structural performance above 1100°C and stability up to 1300 °C. Grain-size effects, additive manufacturing–induced anisotropy, and fine trigonal Y₂O₃ particles enhance creep resistance.

    • Timothy M. Smith
    • Christopher A. Kantzos
    • Paul R. Gradl
    ResearchOpen Access
    Nature Communications
    Volume: 17, P: 1-14
  • Understanding deregulation of biological pathways in cancer can provide insight into disease etiology and potential therapies. Here, as part of the PanCancer Analysis of Whole Genomes (PCAWG) consortium, the authors present pathway and network analysis of 2583 whole cancer genomes from 27 tumour types.

    • Matthew A. Reyna
    • David Haan
    • Christian von Mering
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-17
  • Current photoproximity labelling methods often require metal-based catalysts to map protein interactomes but, owing to their toxicity, they have limited intracellular applicability. A deazaflavin cofactor has now been developed as a biocompatible alternative for diazirine activation inside living cells, offering accurate mapping of protein interactors and dynamics with excellent spatio-temporal control.

    • Leander B. Crocker
    • Jan Vincent V. Arafiles
    • Christian P. R. Hackenberger
    ResearchOpen Access
    Nature Chemistry
    Volume: 17, P: 1928-1940
  • This study reports a strong chiral induced spin selectivity effect in a polymer bearing only one centrochiral group, with the chiral information transmitted over a distance of 4-6 nm through a 310-helical polymer composed of achiral amino acids.

    • Matthias Rohmer
    • Yishen Xie
    • Wolfgang H. Binder
    ResearchOpen Access
    Communications Materials
    P: 1-10
  • Analyses of 2,658 whole genomes across 38 types of cancer identify the contribution of non-coding point mutations and structural variants to driving cancer.

    • Esther Rheinbay
    • Morten Muhlig Nielsen
    • Christian von Mering
    ResearchOpen Access
    Nature
    Volume: 578, P: 102-111
  • Here the authors perform a trans expression quantitative trait locus meta-analysis study of over 3,700 people and link a USP18 variant to expression of 50 inflammation genes and lupus risk, highlighting how genetic regulation of immune responses drives autoimmune disease and informs new therapies.

    • Krista Freimann
    • Anneke Brümmer
    • Kaur Alasoo
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-15
  • HistoPlexer, a deep learning model, generates multiplexed protein expression maps from H&E images, capturing tumour–immune cell interactions. It outperforms baselines, enhances immune subtyping and survival prediction and offers a cost-effective tool for precision oncology.

    • Sonali Andani
    • Boqi Chen
    • Gunnar Rätsch
    ResearchOpen Access
    Nature Machine Intelligence
    Volume: 7, P: 1292-1307
  • A large genome-wide association study of more than 5 million individuals reveals that 12,111 single-nucleotide polymorphisms account for nearly all the heritability of height attributable to common genetic variants.

    • Loïc Yengo
    • Sailaja Vedantam
    • Joel N. Hirschhorn
    ResearchOpen Access
    Nature
    Volume: 610, P: 704-712
  • Understanding asteroid materials is critical for determining deflection methods for planetary defense. Here the authors show, via experiments performed in High-Radiation to Materials facility at CERN, that iron-rich asteroid materials can absorb more energy without structural failure than standard material parameters would suggest.

    • M. Bochmann
    • K.-G. Schlesinger
    • G. Gregori
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-9
  • Multi-omics datasets pose major challenges to data interpretation and hypothesis generation owing to their high-dimensional molecular profiles. Here, the authors develop ActivePathways method, which uses data fusion techniques for integrative pathway analysis of multi-omics data and candidate gene discovery.

    • Marta Paczkowska
    • Jonathan Barenboim
    • Christian von Mering
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-16
  • A global network of researchers was formed to investigate the role of human genetics in SARS-CoV-2 infection and COVID-19 severity; this paper reports 13 genome-wide significant loci and potentially actionable mechanisms in response to infection.

    • Mari E. K. Niemi
    • Juha Karjalainen
    • Chloe Donohue
    ResearchOpen Access
    Nature
    Volume: 600, P: 472-477
  • Integrating UV lasers is of interest for portable optical clocks and ion-based quantum computers, but material absorption has impeded progress. Here, authors demonstrate a violet integrated laser using UV-transparent materials with mW-level output, narrow linewidth and precise frequency control.

    • C. A. A. Franken
    • W. A. P. M. Hendriks
    • K.-J. Boller
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-9
  • Resonant dispersive wave (RDW) emission enables tunable few-femtosecond UV pulses which can be useful for ultrafast science. Here, the authors investigate ultrafast relaxation and structural evolution of morpholine with enhanced temporal resolution, following excitation via RDWs.

    • Sebastian L. Jackson
    • Andrew W. Prentice
    • Dave Townsend
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-10
  • Seismological and geodetic data are used together with a machine learning earthquake catalogue to reconstruct magma migration before and during the 2025 volcano–tectonic crisis at Santorini volcano, indicating a coupling between Santorini and Kolumbo.

    • Marius P. Isken
    • Jens Karstens
    • Christian Berndt
    ResearchOpen Access
    Nature
    Volume: 645, P: 939-945
  • Distinguishing glioblastoma and primary central nervous system lymphoma (PCNSL) remains challenging due to their overlapping pathology features. Here, the authors develop a computational tool, PICTURE, for differentiating similar pathological features enabling improved diagnosis of CNS tumours.

    • Junhan Zhao
    • Shih-Yen Lin
    • Kun-Hsing Yu
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-16
  • Li-Fraumeni syndrome is a cancer predisposition disorder caused by TP53 variants, but the way different TP53 variants contribute remains unclear. Here, the authors analyse TP53 mutagenesis datasets and identify five TP53 variant clusters that show associations with specific cancer patterns as well as potential clinical strategies.

    • Nicholas W. Fischer
    • Noel Ong
    • David Malkin
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-14
  • This work investigates changes in regularity of crop failure, heatwave and wildfire exposure for different future climate scenarios. Major shifts in dominant periods are observed when moving from pre-industrial to current climate conditions.

    • Karim Zantout
    • Juraj Balkovic
    • Jacob Schewe
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-15
  • Eye movements during scene viewing are tied to grid-like codes in the entorhinal cortex. Grid signals are specific to later remembered scenes, covary with activity in visuo-oculomotor regions, and are linked to weaker memory.

    • Luise P. Graichen
    • Magdalena S. Linder
    • Isabella C. Wagner
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-15
  • The authors demonstrate a simple direct-current-measurement characterization of a quarter-wavelength superconducting coplanar waveguide resonator using an on-chip bolometer. This approach offers simpler experimental instrumentation and much larger frequency range of operation compared to traditional RF techniques.

    • Christoforus Dimas Satrya
    • Yu-Cheng Chang
    • Jukka P. Pekola
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-7
  • Unconventional economic approaches with transformative potential for sustainability are too dispersed to gain sufficient traction in policy. With qualitative content analysis, this study brings coherence to many documents discussing such approaches to support efforts towards mainstreaming them.

    • Jasper O. Kenter
    • Simone Martino
    • Steve Waddell
    ResearchOpen Access
    Nature Sustainability
    Volume: 8, P: 837-847
  • Analysis of cancer genome sequencing data has enabled the discovery of driver mutations. Here, as part of the ICGC/TCGA Pan-Cancer Analysis of Whole Genomes (PCAWG) Consortium the authors present DriverPower, a software package that identifies coding and non-coding driver mutations within cancer whole genomes via consideration of mutational burden and functional impact evidence.

    • Shimin Shuai
    • Federico Abascal
    • Christian von Mering
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-12
  • Samples returned from asteroid Bennu contain bio-essential sugars such as ribose and glucose that may have formed in the parent asteroid from brines containing formaldehyde, according to a geochemical study.

    • Yoshihiro Furukawa
    • Sako Sunami
    • Dante S. Lauretta
    ResearchOpen Access
    Nature Geoscience
    Volume: 19, P: 19-24
  • A meta-analysis of genome-wide association studies of type 2 diabetes (T2D) identifies more than 600 T2D-associated loci; integrating physiological trait and single-cell chromatin accessibility data at these loci sheds light on heterogeneity within the T2D phenotype.

    • Ken Suzuki
    • Konstantinos Hatzikotoulas
    • Eleftheria Zeggini
    ResearchOpen Access
    Nature
    Volume: 627, P: 347-357
  • Our understanding of how post-translational modification—protein phosphorylation—impacts the complexity of eukaryotic signalling pathways is continuously expanding. Now, protein oligophosphorylation has been characterized as an additional phosphorylation mode. Structural and mass spectrometry methods revealed that NME1 catalysed its own oligophosphorylation, leading to altered protein–protein interactions.

    • Arif Celik
    • Felix Schöpf
    • Dorothea Fiedler
    ResearchOpen Access
    Nature Chemistry
    Volume: 17, P: 1757-1767
  • Integrative analyses of transcriptome and whole-genome sequencing data for 1,188 tumours across 27 types of cancer are used to provide a comprehensive catalogue of RNA-level alterations in cancer.

    • Claudia Calabrese
    • Natalie R. Davidson
    • Christian von Mering
    ResearchOpen Access
    Nature
    Volume: 578, P: 129-136
  • In the Tumor Profiler proof-of-concept observational study, a multiomics approach for profiling tumors from patients with melanoma was feasible, returning data within 4 weeks and informing treatment recommendations in 75% of cases.

    • Nicola Miglino
    • Nora C. Toussaint
    • Andreas Wicki
    ResearchOpen Access
    Nature Medicine
    Volume: 31, P: 2430-2441
  • A genome-wide association meta-analysis study of blood lipid levels in roughly 1.6 million individuals demonstrates the gain of power attained when diverse ancestries are included to improve fine-mapping and polygenic score generation, with gains in locus discovery related to sample size.

    • Sarah E. Graham
    • Shoa L. Clarke
    • Cristen J. Willer
    Research
    Nature
    Volume: 600, P: 675-679
  • The flagship paper of the ICGC/TCGA Pan-Cancer Analysis of Whole Genomes Consortium describes the generation of the integrative analyses of 2,658 cancer whole genomes and their matching normal tissues across 38 tumour types, the structures for international data sharing and standardized analyses, and the main scientific findings from across the consortium studies.

    • Lauri A. Aaltonen
    • Federico Abascal
    • Christian von Mering
    ResearchOpen Access
    Nature
    Volume: 578, P: 82-93
  • Viral pathogen load in cancer genomes is estimated through analysis of sequencing data from 2,656 tumors across 35 cancer types using multiple pathogen-detection pipelines, identifying viruses in 382 genomic and 68 transcriptome datasets.

    • Marc Zapatka
    • Ivan Borozan
    • Christian von Mering
    ResearchOpen Access
    Nature Genetics
    Volume: 52, P: 320-330
  • The authors present SVclone, a computational method for inferring the cancer cell fraction of structural variants from whole-genome sequencing data.

    • Marek Cmero
    • Ke Yuan
    • Christian von Mering
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-15