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Showing 151–200 of 6285 results
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  • Here the authors reveal how an incoherent feedforward C/EBPα–Notch circuit times lung cell fate, guiding alveolar development, repair after injury, and shifts between protective and reparative states.

    • Amitoj S. Sawhney
    • Brian J. Deskin
    • Douglas G. Brownfield
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-20
  • The characterization of 4,645 whole-genome and 19,184 exome sequences, covering most types of cancer, identifies 81 single-base substitution, doublet-base substitution and small-insertion-and-deletion mutational signatures, providing a systematic overview of the mutational processes that contribute to cancer development.

    • Ludmil B. Alexandrov
    • Jaegil Kim
    • Christian von Mering
    ResearchOpen Access
    Nature
    Volume: 578, P: 94-101
  • The joint analysis of datasets from NOvA and T2K, the two currently operating long-baseline neutrino oscillation experiments, provides new constraints related to neutrino masses and fundamental symmetries.

    • S. Abubakar
    • M. A. Acero
    • S. Zsoldos
    ResearchOpen Access
    Nature
    Volume: 646, P: 818-824
  • The ATLAS Collaboration reports the observation of the electroweak production of two jets and a Z-boson pair. This process is related to vector-boson scattering and allows the nature of electroweak symmetry breaking to be probed.

    • G. Aad
    • B. Abbott
    • L. Zwalinski
    ResearchOpen Access
    Nature Physics
    Volume: 19, P: 237-253
  • Chiral superconductors are predicted to realize Majorana normal fluid at its boundary, but remain elusive experimentally. Here, Bae et al. report anomalous surface normal fluid response in UTe2 single crystal which is further attributed to a chiral spin-triplet pairing state.

    • Seokjin Bae
    • Hyunsoo Kim
    • Steven M. Anlage
    ResearchOpen Access
    Nature Communications
    Volume: 12, P: 1-5
  • The immunology of Indigenous populations is generally understudied outside the context of diseases that are prevalent in these communities. Here the authors identify prevalence of influenza CD8+ T cell epitopes in an Indigenous Australian population expressing the susceptibility allomorph HLA A*24:02 and validate immunodominance of some of these epitopes in mice.

    • Luca Hensen
    • Patricia T. Illing
    • Katherine Kedzierska
    ResearchOpen Access
    Nature Communications
    Volume: 12, P: 1-20
  • Inactivating PPP2R1A mutations correlate with better survival after immune checkpoint blockade in patients with ovarian clear cell carcinoma, suggesting that targeting the phosphatase 2A (PP2A) pathway may represent an effective startegy for improving responses to immunotherapy.

    • Yibo Dai
    • Anne Knisely
    • Amir A. Jazaeri
    ResearchOpen Access
    Nature
    Volume: 644, P: 537-546
  • Analyses of 2,658 whole genomes across 38 types of cancer identify the contribution of non-coding point mutations and structural variants to driving cancer.

    • Esther Rheinbay
    • Morten Muhlig Nielsen
    • Christian von Mering
    ResearchOpen Access
    Nature
    Volume: 578, P: 102-111
  • The role of the tumour microenvironment in the response to immune checkpoint inhibitors in metastatic melanoma remains poorly understood. Here, single cell profiling of metastatic melanoma samples identifies associations of the mature dendritic enriched in immunoregulatory molecules subtype with immunotherapy response.

    • Jiekun Yang
    • Cassia Wang
    • Manolis Kellis
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-19
  • The International Brain Laboratory presents a brain-wide electrophysiological map obtained from pooling data from 12 laboratories that performed the same standardized perceptual decision-making task in mice.

    • Leenoy Meshulam
    • Dora Angelaki
    • Ilana B. Witten
    ResearchOpen Access
    Nature
    Volume: 645, P: 177-191
  • An analysis of 18 metagenomic datasets of individuals with colorectal cancer, adenomas and healthy controls yields improved cancer prediction accuracy based solely on gut metagenomics, as well as the identification of new species associated with the development of cancer.

    • Gianmarco Piccinno
    • Kelsey N. Thompson
    • Nicola Segata
    ResearchOpen Access
    Nature Medicine
    Volume: 31, P: 2416-2429
  • Analysis of cancer genome sequencing data has enabled the discovery of driver mutations. Here, as part of the ICGC/TCGA Pan-Cancer Analysis of Whole Genomes (PCAWG) Consortium the authors present DriverPower, a software package that identifies coding and non-coding driver mutations within cancer whole genomes via consideration of mutational burden and functional impact evidence.

    • Shimin Shuai
    • Federico Abascal
    • Christian von Mering
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-12
  • Although the number of participants is important for phenotypic prediction accuracy in brain-wide association studies using functional MRI, scanning for at least 30 min offers the greatest cost effectiveness.

    • Leon Qi Rong Ooi
    • Csaba Orban
    • Clifford R. Jack Jr
    ResearchOpen Access
    Nature
    Volume: 644, P: 731-740
  • A genome-wide association meta-analysis study of blood lipid levels in roughly 1.6 million individuals demonstrates the gain of power attained when diverse ancestries are included to improve fine-mapping and polygenic score generation, with gains in locus discovery related to sample size.

    • Sarah E. Graham
    • Shoa L. Clarke
    • Cristen J. Willer
    Research
    Nature
    Volume: 600, P: 675-679
  • Finite momentum superconducting pairing refers to a class of unconventional superconducting states where Cooper pairs acquire a non-zero momentum. Here the authors report a new superconducting state in bulk 4Hb-TaS₂, where magnetic fields induce finite momentum pairing via magnetoelectric coupling.

    • F. Z. Yang
    • H. D. Zhang
    • H. Miao
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-9
  • ICeChIP (internally calibrated ChIP) uses spiked-in, defined nucleosomal standards to overcome the pitfalls of traditional ChIP experiments, enabling the measurement of antibody specificity and the absolute measurement of histone modification density at genomic loci.

    • Adrian T. Grzybowski
    • Rohan N. Shah
    • Alexander J. Ruthenburg
    Protocols
    Nature Protocols
    Volume: 14, P: 3275-3302
  • A terahertz field exceeding 1 V nm−1 induced a structural phase transition in the top atomic layer of a bulk WTe2 crystal. Differential imaging revealed a surface shift of 7 ± 3 pm and an electronic signature consistent with a topological phase transition.

    • V. Jelic
    • S. Adams
    • T. L. Cocker
    Research
    Nature Photonics
    Volume: 19, P: 1048-1055
  • Cultivation of tropical soil microorganisms combined with physiological experiments and bioinformatics analyses identify a family of clade III lactonase-type nitrous oxide reductases with low sequence identity but high 3D structural similarity to known nitrous oxide reductases.

    • Guang He
    • Weijiao Wang
    • Frank E. Löffler
    Research
    Nature
    Volume: 646, P: 152-160
  • With the generation of large pan-cancer whole-exome and whole-genome sequencing projects, a question remains about how comparable these datasets are. Here, using The Cancer Genome Atlas samples analysed as part of the Pan-Cancer Analysis of Whole Genomes project, the authors explore the concordance of mutations called by whole exome sequencing and whole genome sequencing techniques.

    • Matthew H. Bailey
    • William U. Meyerson
    • Christian von Mering
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-27
  • Despite observed routinely from spacecrafts landing on, e.g., lunar soil, the origin of radial streak patterns has been unclear up to now. Here, the authors report an experimental study of such instabilities in the coupled dynamics of rocket plumes and sand surfaces.

    • J. Sebastian Rubio
    • Neil S. Rodrigues
    • Rui Ni
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-6
  • Membrane budding plays pivotal roles in cellular processes, but a fully artificial system mimicking natural budding processes remains elusive. Here, the authors report a DNA origami-based membrane budding system that recapitulates key aspects of clathrin-mediated endocytosis without relying on components of cellular budding machineries.

    • Michael T. Pinner
    • Hendrik Dietz
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-12
  • Here the authors use a range of approaches to examine the interplay between genetic variants linked to risk for polygenic skin diseases and transcription factors (TFs) important for skin homeostasis. The findings implicate dysregulated binding of specific TF families in risk for diverse skin diseases.

    • Douglas F. Porter
    • Robin M. Meyers
    • Paul A. Khavari
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-28
  • This study uses observations from the DKI Solar Telescope to reveal that the Sun’s corona hosts small-scale torsional Alfvén waves. These twisting motions likely carry enough energy to help heat the Sun’s atmosphere and drive the solar wind.

    • R. J. Morton
    • Y. Gao
    • T. A. Schad
    ResearchOpen Access
    Nature Astronomy
    Volume: 10, P: 42-53
  • Whole-genome sequencing data for 2,778 cancer samples from 2,658 unique donors across 38 cancer types is used to reconstruct the evolutionary history of cancer, revealing that driver mutations can precede diagnosis by several years to decades.

    • Moritz Gerstung
    • Clemency Jolly
    • Christian von Mering
    ResearchOpen Access
    Nature
    Volume: 578, P: 122-128
  • A large genome-wide association study of more than 5 million individuals reveals that 12,111 single-nucleotide polymorphisms account for nearly all the heritability of height attributable to common genetic variants.

    • Loïc Yengo
    • Sailaja Vedantam
    • Joel N. Hirschhorn
    ResearchOpen Access
    Nature
    Volume: 610, P: 704-712
  • Analyzing genetic data from over 210,000 Japanese individuals, the authors uncover 19 novel heart failure risk loci and develop a genetic score to predict those at high risk, revealing shared and ancestry-specific genetic bases across different populations.

    • Nobuyuki Enzan
    • Kazuo Miyazawa
    • Kaoru Ito
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-16
  • Gain-of-function mutations in CTNNB1 (encoding for b-catenin) leading to deregulated Wnt/β-catenin signaling are frequently observed in patients with hepatocellular carcinoma (HCC). Here the authors show that inhibiting b-catenin with lipid nanoparticles encapsulating siRNA targeting CTNNB1 impairs tumor growth and promotes anti-tumor immunity in preclinical HCC models.

    • Brandon M. Lehrich
    • Evan R. Delgado
    • Satdarshan P. Monga
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-26
  • Autism genes converge in midfetal cortical co-expression networks, and chromatin regulators such as CHD8 are increasingly associated with autism spectrum disorder (ASD). Here the authors map CHD8 targets in developing brain, and find that CHD8 directly regulates other ASD risk genes during human neurodevelopment.

    • Justin Cotney
    • Rebecca A. Muhle
    • James P. Noonan
    ResearchOpen Access
    Nature Communications
    Volume: 6, P: 1-11
  • T cell responses can be generated to either pathogen infection or from priming with a vaccine. Here the authors compare T cell generation, phenotype and single cell transcriptome of participants vaccinated with a mpox vaccine or infected with the virus showing that the virus induced T cells showed more effective function and phenotype.

    • Ji-Li Chen
    • Beibei Wang
    • Tao Dong
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-17
  • A comparison of alpha diversity (number of plant species) and dark diversity (species that are currently absent from a site despite being ecologically suitable) demonstrates the negative effects of regional-scale anthropogenic activity on plant diversity.

    • Meelis Pärtel
    • Riin Tamme
    • Martin Zobel
    ResearchOpen Access
    Nature
    Volume: 641, P: 917-924
  • Lipid nanoparticles (LNPs) are a versatile class of clinically approved drug delivery vehicles, particularly for nucleic acid cargoes, but they often suffer from instability issues. Here, the authors report that the room temperature stability of small interfering RNA LNPs formulated with unsaturated ionizable lipids can be improved by inclusion of mildly acidic, antioxidant-containing buffers.

    • Daniel A. Estabrook
    • Lihua Huang
    • Tingting Wang
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-15
  • Cancers evolve as they progress under differing selective pressures. Here, as part of the ICGC/TCGA Pan-Cancer Analysis of Whole Genomes (PCAWG) Consortium, the authors present the method TrackSig the estimates evolutionary trajectories of somatic mutational processes from single bulk tumour data.

    • Yulia Rubanova
    • Ruian Shi
    • Christian von Mering
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-12
  • Together with a companion paper, the generation of a transcriptomic atlas for the mouse lemur and analyses of example cell types establish this animal as a molecularly tractable primate model organism.

    • Antoine de Morree
    • Iwijn De Vlaminck
    • Mark A. Krasnow
    ResearchOpen Access
    Nature
    Volume: 644, P: 173-184
  • Many tumours exhibit hypoxia (low oxygen) and hypoxic tumours often respond poorly to therapy. Here, the authors quantify hypoxia in 1188 tumours from 27 cancer types, showing elevated hypoxia links to increased mutational load, directing evolutionary trajectories.

    • Vinayak Bhandari
    • Constance H. Li
    • Christian von Mering
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-10
  • Ferromagnetic systems produced by the transition metal doping of semiconductors may be used as components of spintronic devices. Here, a new ferromagnet, Li1+y(Zn1-xMnx)As, is prepared in bulk quantities and shown to have a critical temperature approaching 50 K.

    • Z. Deng
    • C.Q. Jin
    • Y.J. Uemura
    Research
    Nature Communications
    Volume: 2, P: 1-5