Abstract
In healthy individuals, short cycles of a fasting-mimicking diet (FMD) decrease systemic inflammatory markers and improve metabolic health. Potential benefits of FMD have not been investigated in Crohn’s disease (CD). We conducted an open-label, randomized, controlled trial to assess the effects of FMD in adults with mild-to-moderate CD. Patients in the FMD group followed an FMD for five consecutive days per month for three consecutive months, returning to their regular baseline diet on non-FMD days. Control participants continued their baseline diet. The primary outcome of clinical response was a reduction in CD Activity Index (CDAI) of at least 70 points or CDAI of ≤150 after the third 5-day diet cycle. Forty-five patients in the FMD group (69.2%) and 14 patients in the control group (43.8%) met the primary outcome of clinical response (P = 0.03). Forty-two patients in the FMD group (64.6%) and 12 patients in the control group (37.5%) achieved the secondary outcome of clinical remission (P = 0.02). There was also a decline from baseline in fecal calprotectin (an inflammatory marker) in the FMD group compared with the control group (−22.0% versus 8.0%, P = 0.03). Exploratory analyses of plasma metabolites and peripheral blood mononuclear cell gene expression revealed post-FMD decreases in key inflammatory lipid mediators and immune-effector transcripts, concordant with reduced CD activity. Together, these findings demonstrate that FMD is superior to a baseline diet for inducing clinical response, clinical remission and biochemical improvement in mild-to-moderate CD, and support further investigation of FMD as an adjunctive therapy for chronic inflammatory diseases. ClinicalTrials.gov registration: NCT04147585.
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Data availability
We have deposited metabolomics raw data on figshare (https://figshare.com/s/5ef87ff3127d0aad5a5a). Anonymized clinical data may be made available upon reasonable request with at least 4 weeks’ notice. Data access requests should contact the corresponding author. Approval of such requests is at the PI’s and sponsor’s discretion and depends on the nature of the request, the merit of the research proposed, the availability of the data and the intended use of the data.
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Acknowledgements
This work was supported by a grant from The Leona M. and Harry B. Helmsley Charitable Trust to Stanford University (to S.R.S., C.G., J.L.S. and A.H.). We specifically acknowledge Helmsley’s S. Soni for her overall support. Additional funding support was provided by NIH–NCATS–CTSA (grant UM1TR004921 to S.R.S. and J.Y.), the Plant Based Diet Initiative at Stanford University (to C.K. and S.R.S.), Kenneth Rainin Foundation (to S.R.S., J.L.S. and S.P.S.), the Doris Duke Foundation Physician Scientist Fellowship Award (2021091 to J.G.), CZ Biohub Physician-Scientist Scholar Award (to J.G.), NIH-NIDDK LRP Award (2L30 DK126220 to J.G., NIH-T32DK007056 to S.P.S. and NIH-K08DK134856 to S.P.S.), Colleen and Robert D. Hass Fund (to S.P.S.), UCSF Center for the Rheumatic Diseases (to J.F.A.), Nora Eccles Treadwell Foundation (to J.F.A.), Arthritis Research Coalition (to J.F.A.), Chan Zuckerberg Biohub Investigator Program (to J.L.S.) and NIH-NIDDK (R01DK085025 to J.L.S.).
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S.R.S. conceptualized the study and acquired funding. S.R.S., C.G., A.H., J.L.S., J.F.A., V.D.L., D.P., L.B., M.M.D., V.C., J.Y., T.F., C.K. and K.J. developed the methodology. C.K., T.F., J.Y., K.J., E.D., H.J., S.R.S. and V.C. performed the formal analysis and visualization. T.F., C.K., K.J., K.K., S. Streett, E.H., G.B., S. Singh, D.L., N.A., J.G., E.D., H.J., M.T., A.P., Y.J., L.B., S.P.S., D.M., S.R.S. and D.P. helped with patient recruitment and data collection. T.F., C.K., J.Y., E.D., H.J., M.T. and K.J. conducted data curation. S.R.S., A.H., J.L.S., M.M.D. and C.G. were responsible for supervision. C.K., T.F. and S.R.S. contributed to writing the original draft of the paper. All authors were involved in writing, reviewing and editing the paper, and provided the final approval.
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V.D.L. has equity interest in L-Nutra and has filed patents related to the FMD. V.D.L. does not receive consulting fees from L-Nutra and has committed his shares of the company to charitable organizations. The authors declare no competing interests.
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Extended data
Extended Data Fig. 1 Clinical outcomes after the first FMD cycle.
CDAI score significantly decreased among participants with mild-to-moderately active CD after completing the first cycle of the FMD compared to control. a, After completing the first 5-day FMD, more participants achieved clinical remission compared to participants who made no diet changes (60.0% versus 37.5%, P = 0.04). b,c, This difference in clinical response after a single cycle of FMD was also observed when patients were stratified into mild (b, 75.0% versus 43.5%, P = 0.02) and moderate (c, 47.6% versus 0.0%, P = 0.01) disease. Results are shown as percentages of participants meeting the criteria for response. P values were calculated by Fisher’s exact test or chi-square test; NS: P ≥ 0.05, *P < 0.05. FMD, fasting-mimicking diet.
Extended Data Fig. 2 Clinical outcomes 3 months after the third FMD cycle.
CDAI score assessment at the end of the study (week 24); for participants in the FMD group, this corresponded to approximately 3 months after completion of the third FMD cycle. a–d, No significant differences were observed in the percentages of participants achieving clinical response (a, 56.9% versus 53.1%, P = 0.83) or clinical remission (b, 55.4% versus 43.8%, P = 0.39) between FMD and control groups after 3-month washout, regardless of mild (c, 54.6% versus 60.9%, P = 0.79) or moderate (d, 71.4% versus 33.3%, P = 0.10) disease severity. Results are shown as percentages of participants meeting the criteria for response. P values were calculated by Fisher’s exact test or chi-square test; NS: P ≥ 0.05. FMD, fasting-mimicking diet.
Extended Data Fig. 3 PRO and quality of life after the third FMD cycle.
a, Remission by PRO was achieved by 47.7% of FMD versus 25.0% (P < 0.05). b, Improvement in SIBDQ by more than 50 points was observed in 46.2% of FMD versus 25.0% of control participants (P < 0.05)15,16. c, Remission by PGA was observed in 24.6% of FMD versus 6.3% of control participants (P = 0.03). FMD, fasting-mimicking diet; PRO, patient-reported outcomes; SIBDQ, short inflammatory bowel disease questionnaire; PGA, patient global assessment. Results are shown as percentages of participants meeting the criteria for response. P values were calculated by two-sided Fisher’s exact test or chi-square test; *P < 0.05.
Extended Data Fig. 4 Per-protocol analysis of clinical, patient-reported, and laboratory outcomes after the third FMD cycle.
Data from participants who completed the study were assessed after the third FMD cycle; for participants in the control group, this corresponded to approximately 12 weeks after baseline. a–c, Significantly more participants met criteria for clinical response 70 (a, 82.0% versus 50.0%, P < 0.01), clinical response 100 (b, 78.0% versus 42.9%, P < 0.01), and clinical remission (c, 76.0% versus 39.3%, P < 0.01) after completing the three FMD cycles compared to participants who made no dietary changes. d,e, Compared to baseline, a significantly higher percentage of participants reported remission by PRO (d, 58.0% versus 25.0%, P < 0.01) and improvement in SIBDQ score (e, 56.0% versus 28.6%, P = 0.02) after the third FMD cycle compared to participants in the control arm. f,g, There were significant differences in mean percentage change in CRP (f, −15.7% versus 36.9%, P < 0.01) and fecal calprotectin (g, −36.5% versus 8.9%, P < 0.01) between the FMD and control arms. a–e, Percentages of participants meeting the criteria for response. f,g, Mean percentage change measured from baseline to after the third FMD cycle; error bars represent standard error of the mean (s.e.m.). P values were calculated by Fisher’s exact test or chi-square test (a–e) or t-test (f,g); *P < 0.05, **P < 0.01. FMD, fasting-mimicking diet; PRO, patient-reported outcomes; SIBDQ, short inflammatory bowel disease questionnaire; CRP, C-reactive protein.
Extended Data Fig. 5 Downregulated pathways in FMD compared to control.
Features with fold change ≤1/1.5 (FMD versus control) underwent pathway enrichment analysis using Reactome in MetaboAnalyst. Figure shows the top 20 downregulated pathways. Two-sided tests as implemented in MetaboAnalyst; P values were FDR-adjusted using the two-stage Benjamini-Krieger-Yekutieli (BKY) procedure, with significance defined as q ≤ 0.10. All pathways shown have FDR-adjusted P < 0.10. Dot size indicates the enrichment score, and the x-axis represents statistical significance as −log₁₀(FDR). FMD, fasting-mimicking diet; RAMD, random accelerator molecular dynamics; FDR, false discovery rate; NF-κB, nuclear factor-κ B; AP-1, activator protein 1; PG, prostaglandins; TX, thromboxanes; LOX, lipooxygenases; COX-2, cyclooxygenase-2; EGFR, epidermal growth factor receptor.
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Kulkarni, C., Fardeen, T., Gubatan, J. et al. A fasting-mimicking diet in patients with mild-to-moderate Crohn’s disease: a randomized controlled trial. Nat Med (2026). https://doi.org/10.1038/s41591-025-04173-w
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DOI: https://doi.org/10.1038/s41591-025-04173-w


