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For the celebration of our tenth anniversary, Nature Microbiology asks the former editors to reflect on their time at the journal.

As Nature Aging celebrates its fifth anniversary, the journal asks some of the researchers who contributed to the journal early on to reflect on the past and the future of aging and age-related disease research, the impact of the field on human health now and in the future, and what challenges need to be addressed to ensure sustained progress.

Global river runoff projections constrained by observations indicate stronger declines in runoff under climate change than raw model outputs, according to a study combining multiple observational datasets, two generations of climate models, and large ensemble sampling of internal variability.

The 4D Nucleome Project demonstrates the use of genomic assays and computational methods to measure genome folding and then predict genomic structure from DNA sequence, facilitating the discovery of potential effects of genetic variants, including variants associated with disease, on genome structure and function.

u-Segment3D is a universal framework that translates and enhances 2D instance segmentations to a 3D consensus instance segmentation without training data. It performs well across diverse datasets, including cells with complex morphologies.

This Perspective argues that diagnoses derived from self-reports, electronic health records and self-administered questionnaires introduce heritable bias that confounds the interpretation of data from genome-wide association studies, resulting in false-positive and disease-irrelevant genetic signals.

Aligning foundation models with human judgments enables them to more accurately approximate human behaviour and uncertainty across various levels of visual abstraction, while additionally improving their generalization performance.

Ghatbale et al. adapted a co-evolutionary technique to develop Klebsiella pneumoniae phages to be highly active longitudinally against K. pneumoniae clinical isolates, including drug resistant isolates.

Andrew Robinson reviews five of the best science picks.

With the generation of large pan-cancer whole-exome and whole-genome sequencing projects, a question remains about how comparable these datasets are. Here, using The Cancer Genome Atlas samples analysed as part of the Pan-Cancer Analysis of Whole Genomes project, the authors explore the concordance of mutations called by whole exome sequencing and whole genome sequencing techniques.

Practical tips for graduate students with an aspiration to start a life science venture.

Analysis of cancer genome sequencing data has enabled the discovery of driver mutations. Here, as part of the ICGC/TCGA Pan-Cancer Analysis of Whole Genomes (PCAWG) Consortium the authors present DriverPower, a software package that identifies coding and non-coding driver mutations within cancer whole genomes via consideration of mutational burden and functional impact evidence.

De novo design of Ca²⁺ channels with ion selectivity that can assemble appropriately and mediate Ca²⁺ conductance when expressed in cells is described.

Cancers evolve as they progress under differing selective pressures. Here, as part of the ICGC/TCGA Pan-Cancer Analysis of Whole Genomes (PCAWG) Consortium, the authors present the method TrackSig the estimates evolutionary trajectories of somatic mutational processes from single bulk tumour data.

Molecular scaffolds bearing 1,1-diaryl-substituted four-membered rings remain difficult to access using traditional synthesis. Now it has been shown that a modular, nickel-electrocatalytic sequence enables the programmable, scalable and chemoselective synthesis of these high-value motifs, offering broad utility across drug discovery and showcasing strategic applications to patented intermediates.

A study of several longitudinal birth cohorts and cross-sectional cohorts finds only moderate overlap in genetic variants between autism that is diagnosed earlier and that diagnosed later, so they may represent aetiologically different conditions.

An extreme flare has been seen from a supermassive black hole at redshift z = 2.6. First detected in 2018, it is 30 times brighter than similar events. The most likely cause is the shredding of a star of 30 solar masses or more.

Antimicrobial resistance genes that have been mobilized between bacterial species represent a subset of the naturally occurring resistome. Here, the authors compare the abundance, diversity and geographical patterns of acquired resistance genes with latent resistance genes in global sewage metagenomes.

The wrong arm of the law.

In-body manufacturing promises a faster, cheaper and simpler alternative to CAR-T cell therapy — if the field can deliver clinical readouts that prove long-term safety and efficacy.

Andrew Wood plans for a career-defining 12 months ahead, and what he needs to focus on.

The Mass Spectrometry Query Language (MassQL) is an open-source language that enables instrument-independent searching across mass spectrometry data for complex patterns of interest via concise and expressive queries without the need for programming skills.

A study challenges the method used to estimate carbon transport by phytoplankton to the deep sea.

Here the authors identify real-space contributions to the characteristics of high-harmonic generation in ReS2 and demonstrate the possibility of laser-controlled emission. They find that the spectrum is not just determined by the band structure, but also by the interference between HHG signals coming from different atoms within the unit cell.

Climate change threatens mountain ash (Eucalyptus regnans) forests, which are among Earth’s most carbon-dense ecosystems. This study finds that a projected 3^∘C warming by 2080 could reduce tree density and carbon storage in these forests by 24%

Andrew Robinson reviews five of the week’s best science picks.

Baleen whales migrate from high latitude feeding grounds to subtropical reproductive winter grounds, translocating limiting nutrients across ecosystems. This study estimates the latitudinal movement of nutrients from carcasses, placentas and urea for four species of baleen whales that exhibit annual migrations.

Untrustworthy sources or detectors mean that quantum entanglement cannot always be ensured, but quantum steering inequalities can verify its presence. Using a highly efficient system, Smithet al. are able to close the detection loophole and clearly demonstrate steering between two parties.

Customizing the output from a laser is typically done by appropriate optical elements. Here Ngcobo et al.show that a digitally controlled holographic mirror placed within the laser cavity can be used to dynamically select the desired laser output modes.

In this study, the authors assess the global response to the toxic aldehyde glyoxal (GO) in Pseudomonas aeruginosa, suggesting that GO controls quorum sensing during infection through a mechanism involving a novel protein, ArqI.

The majority of human genes can produce multiple isoforms, but studying their functional relevance requires tools to target specific isoforms. Here, the authors develop a CRISPR-based exon-exon junction-targeting strategy to achieve isoform-specific RNA knockdown.

Public museums and private collections are stuffed with scientific artefacts gathered by individuals — often with highly questionable obsessions and motivations.

This Consensus Statement clarifies the existing subset-based nomenclature for T cells. Furthermore, it proposes an alternative modular nomenclature that is designed to be brief and flexible and to avoid ambiguity and unwanted implications. The authors also provide guidance on how T cell nomenclature should be described in research papers.

Stratified medicine promises to tailor treatment for individual patients, however it remains a major challenge to leverage genetic risk data to aid patient stratification. Here the authors introduce an approach to stratify individuals based on the aggregated impact of their genetic risk factor profiles on tissue-specific gene expression levels, and highlight its ability to identify biologically meaningful and clinically actionable patient subgroups, supporting the notion of different patient ‘biotypes’ characterized by partially distinct disease mechanisms.

A professional body for UK social scientists can help to improve research practice — and not just in public engagement, says Andrew Webster.

The authors develop a computational tool to design NMR pulses, based on the GRadient Assisted Pulse Engineering approach, that can calculate optimal pulse shapes on the fly during the measurements, to match specific samples and hardware, overcoming the limitations of pre-designed pulses.

The El Niño of 2015–2016 was unusual and exceptionally strong. Satellite observations and modelling suggest that convective lofting and sublimation of ice particles during this event contributed to moistening of the lower stratosphere.