Introduction

The confluent layer of endothelial and epithelial cells that lines the surfaces and lumens of internal organs is often exposed to excessive mechanical forces. These mechanical forces are linked to the pathophysiology of diseases in the heart, pulmonary aorta, esophagus, and lung1. In the lung, distension during ventilator-induced lung injury and airway epithelial compression during asthma exacerbations have been recognized as contributors to disease progression. Specifically, bronchoconstriction during asthma exacerbations activates mechanotransduction in airway epithelial cells, leading to alterations in the transcriptome and secretome, as well as the induction of cell death2,3,4,5. These mechanically induced responses play a critical role in the progression of asthma6,7. Worldwide, asthma exacerbations pose a significant clinical burden, contributing to hospitalizations, intensive care unit admissions, and approximately 1000 deaths per day8. While most studies have focused on airway inflammation driven by immune cell activation, the contribution of bronchoconstriction is often underappreciated. However, as described above, emerging evidence indicates that the excessive mechanical forces generated during bronchoconstriction not only damage epithelial cells but also amplify airway inflammation and remodeling5,7. This mechanically initiated process may contribute to a vicious cycle that drives sustained and delayed asthmatic responses, the condition frequently experienced by patients with severe asthma9. Therefore, elucidating the precise mechanisms by which these mechanical forces are transduced into pathological responses in airway epithelial cells is essential for identifying new therapeutic targets and advancing the treatment of asthma. Moreover, uncovering how mechanical forces trigger inflammation and tissue remodeling likely has broader implications for disease in other organs where controlled mechanical forces are needed to maintain normal physiological functions.

To fill this gap, and as detailed in our experimental results, we investigated the role of Hic-5 (encoded by TGFB1I1), a focal adhesion adapter protein10,11, in airway epithelial cells. Using RNA sequencing (RNA-seq) analysis of well-differentiated primary human bronchial epithelial (HBE) cells exposed to mechanical compression, mimicking epithelial deformation during bronchoconstriction, we identified TGFB1I1 as a key mechanosensitive gene in airway epithelial cells. Hic-5 protein levels were also induced by mechanical compression, and the induction was dependent on the TGF-β receptor and ERK signaling. Single-cell RNA-seq (scRNA-seq) analysis of cells isolated from asthma patients revealed elevated TGFB1I1 expression in basal airway epithelial cells and confirmed its link to bronchoconstriction. Hic-5 knockdown (KD) in HBE cells attenuated mechanoresponses, reducing differentially expressed genes (DEGs) by over 70%, including EDN1. This attenuation of EDN1 expression led to decreased secretion of its encoded protein, endothelin-1 (ET-1), a potent bronchoconstrictor. Furthermore, Hic-5 KD protected against stress fiber formation, highlighting its role in the regulation of cellular force generation. These findings identify Hic-5 as a key regulator of airway epithelial mechanotransduction, linking mechanical stress to gene regulation and airway remodeling in asthma.

Results

TGFB1I1 expression is induced by mechanical compression and TGF-β1 in airway epithelial cells in vitro and during asthma exacerbations in humans

While the role of Hic-5 has been studied in the context of epithelial-to-mesenchymal transition (EMT) and cancer metastasis, its role in mechanically dysregulated lung conditions, particularly those associated with progressive pathological conditions, has not been previously explored, highlighting our findings12,13,14. In our RNA-seq analysis in HBE cells, we identified that mechanical compression significantly induced TGFB1I1, the gene encoding Hic-5 protein. In HBE cells from all six donors without underlying airway disease, TGFB1I1 was significantly upregulated by mechanical compression at both 3 and 24 hours post-compression (Fig. 1A). To validate our RNA-seq data, we performed a time-course experiment by measuring TGFB1I1 mRNA expression by qPCR at 3, 8, and 24 h post-compression (Supplementary Fig. 1). We observed a transient increase in TGFB1I1 mRNA expression, which was maximally induced at 3 h post-compression, with its significant induction of 4.2-fold (Fig. 1B) compared to the time-matched control. As TGFB1I1 was originally identified as a TGF-β1-inducible gene, and its induction by TGF-β1 has been observed in multiple cell types15, we tested whether it is similarly induced by TGF-β1 in HBE cells, given that TGF-β1 levels are elevated in patients with asthma. After incubation of HBE cells with recombinant human TGF-β1 (rhTGF-β1, 10 ng/ml) for 24 h, we detected a significant 3.8-fold induction of TGFB1I1 mRNA expression (Fig. 1C).

Fig. 1: The expression of TGFB1I1, encoding Hic-5, is induced by mechanical compression, rhTGF-β1, and bronchoconstriction in human airway basal cells.
figure 1

A Compression-induced TGFB1I1 mRNA expression in HBE cells from scRNA-seq data. Expression plots show normalized TGFB1I1 mRNA levels at 3 and 24 h following mechanical compression (30 cm H2O). TGFB1I1 mRNA expression was significantly increased by mechanical compression (mean ± SEM, n = 6 HBE cell donors). P values: one-way ANOVA with Holm–Šídák post hoc correction. B TGFB1I1 mRNA expression in HBE cells was measured at 24 h post-compression. TGFB1I1 mRNA expression was significantly increased by mechanical compression (mean ± SEM, n = 4 HBE cell donors) P value: two-way ANOVA. C TGFB1I1 mRNA expression in HBE cells was determined following exposure to rhTGF-β1 (10 ng/ml) for 24 h. Stimulation with rhTGF-β1 significantly increased TGFB1I1 expression (mean ± SEM, n = 6 HBE cell donors). P value: two-way ANOVA. In AC, each symbol represents an individual donor: open circles for control and closed circles for compression or rhTGF-β1. D Reanalysis of published scRNA-seq data from human bronchial biopsies17. The plot presents the percentage of cells (y-axis) in each epithelial cell type (x-axis) expressing TGFB1I1 for individual patients (small dots) after challenge with a diluent control (gray circles) or an allergic antigen (red circles). P value: MAST likelihood-ratio test, two-sided56. (n = 4 patients). E Reanalysis of published scRNA-seq data from the Human Lung Cell Atlas18 comparing mean expression of TGFB1I1 transcript (y-axis) between airway basal and non-basal (other lung epithelial) cells (x-axis) for each individual donor (small dots). P value: Wilcoxon rank-sum test. (n = 37 donors) In D, E, large dots represent the mean of individual human donors, mean ± SEM. F Uniform manifold approximation and projection (UMAP) embedding of published scRNA-seq profiles of human airway epithelial cells after 14 days of air-liquid interface (ALI) differentiation, downloaded from GEO accession (GSM2772992)19, colored by expression of key marker genes.

To further establish a mechanistic link between TGFB1I1 induction in our in vitro system and its clinical relevance during bronchoconstriction in asthma exacerbations, we employed a unique approach by annotating TGFB1I1 expression using scRNA-seq data from published human asthma exacerbation studies16. This analysis revealed a significant induction of TGFB1I1 expression, predominantly in basal airway epithelial cells, following allergen challenge (Fig. 1D). Importantly, the extent of allergen-induced TGFB1I1 expression was significantly greater in individuals with asthma who underwent bronchoconstriction than in allergic individuals without asthma (Supplementary Fig. 2). In addition, no significant difference in TGFB1I1 expression was detected at baseline between allergic controls and individuals with allergic asthma. This suggests that elevated Hic-5 expression is not a constitutive feature of the asthmatic airway epithelium, but rather a response to allergen exposure or bronchoconstriction, and may represent a critical regulatory mechanism in uncontrolled asthma. We then validated this cell-type-specific expression of TGFB1I1 in basal cells by analyzing two additional publicly available scRNA-seq datasets17,18. In the first scRNA-seq dataset17, we assessed the regional distribution of TGFB1I1 expression across the respiratory tract, including the nasal passages, airways, and lung parenchyma (Supplementary Fig. 3). Our analysis demonstrated the expression of TGFB1I1 in both the airway and lung parenchyma, but not in the nasal passages. Within the airway, TGFB1I1 expression was significantly higher in basal cells compared to non-basal cell populations (Fig. 1E). In the second dataset18, which is well-annotated scRNA-seq data from the Human Cell Atlas, TGFB1I1 expression was enriched in cells annotated by basal cell-specific markers, such as TP63, KRT5, and KRT17 (Fig. 1F). Both analyses confirmed predominant expression of TGFB1I1 in basal cells in human airways.

Hic-5 protein induction is mediated by the TGF-β receptor-ERK axis in response to mechanical compression and TGF-β1

Consistent with TGFB1I1 being annotated in basal cells, our qPCR analysis also detected a substantial level of TGFB1I1 mRNA expression at the time the air-liquid interface (ALI) culture was established (on ALI day 0), which subsequently decreased over the course of differentiation in ALI culture (Fig. 2A). Unlike this reduction during differentiation, expression of the basal cell marker gene TP63 remained unchanged, whereas expression of differentiation markers, MUC5AC, FOXJ1, and DNAI2, increased (Supplementary Fig. 4). Hic-5, the protein encoded by TGFB1I1, was detectable by western blot analysis in confluent basal cell layers but significantly decreased over the course of ALI culture (Fig. 2B). Similar to the induction of TGFB1I1 expression (Fig. 1A, B), Hic-5 protein expression was induced by both mechanical compression and TGF-β1 (Fig. 2C). The induction of Hic-5 by mechanical compression was detected at the first 24 h post-compression and remained constant with no further induction up to 72 h. In contrast, the induction of Hic-5 by TGF-β1, which was detected at 24 h continued to increase in a time-dependent manner, showing further elevation at 48 and 72 h (Fig. 2C). These differences in the kinetics of Hic-5 protein induction may be attributed to the source of TGF-β1, with autocrine production by mechanically compressed epithelial cells versus exogenous TGF-β1 treatment, which mimics its presence in the extracellular environment under chronic disease conditions.

Fig. 2: The induction of Hic-5 depends on the activation of TGF-β receptor and ERK.
figure 2

A TGFB1I1 mRNA expression progressively decreased as basal cells differentiated over the course of 21 days in ALI culture (mean ± SD, n = 2 transwells from a single HBE cell donor). B Representative western blots present that Hic-5 protein was prominently detectable in confluent basal cell layers on ALI day 0, and its expression decreased as the basal cells differentiated. Densitometry analysis was performed, and the fold change relative to GAPDH was calculated in arbitrary units (A.U.) (mean ± SD, n = 5 HBE cell donors). One-way ANOVA with Holm–Šídák post hoc correction (vs. ALI day 0): *p = 0.0426 (ALI day 7), *p = 0.0328 (ALI day 14), and *p = 0.0328 (ALI day 21). In A, B, each open circle represents an individual donor. C In well-differentiated HBE cells, Hic-5 protein increased in response to both mechanical compression and rhTGF-β1 treatment. Compression-induced Hic-5 protein expression remained constant for up to 72 h post-compression, whereas rhTGF-β1 stimulation progressively increased Hic-5 protein levels over 72 h. Densitometry analysis was performed, and the fold change relative to GAPDH was calculated in arbitrary units (A.U.) (mean ± SD, n = 2 HBE cell donors). D Representative western blots demonstrate that the compression-induced Hic-5 expression was attenuated by SB431542 (TGF-β receptor inhibitor) and U0126 (ERK inhibitor) but remained unaffected by AG1478 (EGFR inhibitor). E-cadherin and GAPDH were detected as loading controls. Densitometry analysis was performed, and the fold change relative to GAPDH was calculated in arbitrary units (A.U.) (mean ± SD, n = 2 HBE cell donors). E Representative western blots demonstrate that the TGF-β1-induced Hic-5 expression was attenuated by SB431542 and U0126. E-cadherin and GAPDH were detected as loading controls. Densitometry analysis was performed, and the fold change relative to GAPDH was calculated in arbitrary units (A.U.) (mean ± SD, n = 2 HBE cell donors). In CE, each symbol represents an individual donor corresponding to the conditions indicated by the bars. F Representative western blots present the time course of phosphorylation of SMAD2, SMAD3, and ERK (p-SMAD2, p-SMAD3, and p-ERK) in HBE cells following stimulation with mechanical compression or TGF-β1. Compression prominently increased p-ERK levels as early as 15 min and sustained up to 60 min post-stimulation, but did not induce either p-SMAD2 or p-SMAD3. TGF-β1 substantially increased p-SMAD2 and p-SMAD3 within 30 min and sustained up to 120 min, while modestly increased p-ERK levels detected at 60 minutes (n = 2 HBE cell donors). Uncropped versions of the blots are provided as a Source Data file.

To elucidate the signaling pathways regulating the induction of the Hic-5 protein, we tested inhibitors targeting key signaling molecules activated by mechanical compression, including the TGF-β receptor, ERK, and EGFR, which we previously identified2,19,20,21. To block each pathway in mechanically compressed cells, we pretreated the cells with pharmacological inhibitors: SB431542 for the TGF-β receptor, U0126 for ERK, and AG1478 for EGFR. Pretreatment with SB431542 and U0126 attenuated compression-induced Hic-5 protein expression, indicating that compression-induced Hic-5 expression was dependent on the ERK and TGF-β receptor pathways. In contrast, pretreatment with AG1478 had no effect, indicating that compression-induced Hic-5 expression was independent of the EGFR pathway (Fig. 2D). Similarly, pretreatment with SB431542 and U0126 attenuated TGF-β1-induced Hic-5 expression (Fig. 2E), confirming that the TGF-β receptor-ERK axis serves as a common mechanism for Hic-5 induction in response to either mechanical compression or TGF-β1. Given that the TGF-β receptor-ERK axis mediates Hic-5 activation under both conditions, we further examined the downstream TGF-β receptor pathways activated by compression and TGF-β1. We detected p-SMAD2 and p-SMAD3, indicative of the canonical TGF-β receptor pathway, and p-ERK, indicative of the non-canonical TGF-β receptor pathway (Fig. 2F). As expected, TGF-β1 treatment induced both p-SMAD2 and p-SMAD3 within 30 minutes, followed by a moderate increase in p-ERK at later time points. In contrast, compression markedly induced p-ERK with no noticeable induction of either p-SMAD2 or p-SMAD3.

Hic-5 regulates mechanoresponsive genes in HBE cells

Our data, as demonstrated in Fig. 2, indicated that Hic-5 induction depended on key signaling pathways regulating asthma-associated mediators2,19,20,21. Given these mediators are induced by mechanical compression in HBE cells, we hypothesized that Hic-5 plays a regulatory role in airway epithelial mechanoresponses. To test this, we used an antisense oligonucleotide (ASO)-mediated KD approach in well-differentiated HBE cells. Among the five ASO sets we tested in primary HBE cells cultured from multiple donors, we selected the ASO set demonstrating the highest KD efficiency of Hic-5, both at baseline and in response to mechanical compression (Supplementary Fig. 5). In HBE cells treated with a control (scrambled) ASO (denoted as Hic-5 WT), mechanical compression substantially induced Hic-5 protein levels (Fig. 3A). In contrast, in HBE cells treated with an ASO targeting Hic-5 (denoted as Hic-5 KD), where Hic-5 protein levels were markedly lower than in Hic-5 WT cells, the compression-induced increase in Hic-5 protein was minimal, resulting in levels even lower than those detected under control conditions in Hic-5 WT cells (Fig. 3A). Using this ASO-mediated KD approach combined with bulk RNA-seq analysis, we next investigated how Hic-5 deficiency modulates transcriptional profiles in HBE cells at baseline and in response to mechanical compression. First, we compared Hic-5 WT and KD HBE cells under control conditions to confirm the specificity of ASO-mediated KD and to assess potential off-target effects. RNA-seq analysis revealed no other DEGs between Hic-5 WT and KD cells, except for the significantly downregulated TGFB1I1, which encodes the Hic-5 protein (Supplementary Fig. 6). This result confirms the selectivity of the ASO-mediated Hic-5 KD with minimal off-target effects. We then identified DEGs between control and compressed conditions at 3 hr post-compression in both Hic-5 WT (Fig. 3B) and Hic-5 KD (Fig. 3C) HBE cells. In WT HBE cells, 445 genes were upregulated, and 159 genes were downregulated (absolute log2-fold change >0.6 and FDR <0.001, Fig. 3B). In contrast, Hic-5 KD cells displayed a markedly attenuated response to compression, with only 136 upregulated and 49 downregulated genes (Fig. 3C). TGFB1I1 expression was significantly increased by 5.7-fold (FDR <0.001) in Hic-5 WT. While its expression appeared to be significantly induced by 1.2-fold in Hic-5 KD cells, this was likely due to a substantial reduction in TGFB1I1 baseline levels, as shown in Fig. 3A. To compare the effect of Hic-5 KD on compression-mediated transcripts, we also illustrated the DEGs between compressed Hic-5 WT and compressed Hic-5 KD cells using a volcano plot (Fig. 3D) and heatmaps (Supplementary Fig. 7). The comparison showed that 193 compression-induced genes were downregulated in Hic-5 KD cells compared with Hic-5 WT cells under compression, suggesting attenuated induction of compression-responsive genes in the absence of Hic-5. These genes included TGFB1I1 (encoding Hic-5), PDGFB, and EDN1, as annotated in Fig. 3D.

Fig. 3: Mechanical compression regulates multiple cellular responses in a Hic-5-dependent manner.
figure 3

A Representative Western blots demonstrate the effective knockdown (KD) of Hic-5 in bronchial epithelial cells at baseline and in response to mechanical compression. Compression induced Hic-5 expression in Hic-5 wildtype (WT) cells, whereas this Hic-5 induction was abolished in Hic-5 KD cells. Densitometry analysis was performed, and the fold change relative to GAPDH was calculated in arbitrary units (A.U.) (mean ± SD, n = 5 HBE cell donors). P values: one-way ANOVA with Holm–Šídák post hoc correction. Uncropped versions of the blots are provided as a Source Data file. B, C Volcano plots present differentially expressed genes (DEGs) between control and compressed conditions (DESeq2 test, two-sided). In Hic-5 WT cells, mechanical compression induced a significant number of DEGs (B). In Hic-5 KD cells, the number of DEGs were significantly fewer compared to WT cells (C). n = 3 HBE cell donors. D The volcano plot presents DEGs between Hic-5 WT and Hic-5 KD cells under compression. In BD, upregulated genes are marked by red, downregulated genes by green, and not significant genes by gray. E The top 10 DEGs were ranked by Log2 (fold change) between Hic-5 WT vs Hic-5-KD under compression. F Gene Ontology (GO) analysis identified biological processes and molecular functions of upregulated genes in Hic-5 WT cells compared with Hic-5 KD under compression, as demonstrated in (D). G The enrichment network visualized functional modules of upregulated genes in Hic-5 WT cells compared with Hic-5 KD under compression, as demonstrated in (D).

To identify candidate genes regulated by Hic-5, we ranked the downregulated genes by log₂ fold change values (Fig. 3E). The top-ranked genes included PDGFB, which had a log₂ fold change of −2.5 in Hic-5 KD cells, followed by EDN1 with a log₂ fold change of −2.2. In Fig. 3B, C, we annotated PDGFB and EDN1 to highlight their responses to mechanical compression in Hic-5 WT and Hic-5 KD HBE cells. In WT, PDGFB and EDN1 showed significant increases of 9.9- and 5.3-fold, respectively (Fig. 3B). However, in Hic-5 KD cells, the expression of both genes showed no significant differences between control and compressed cells (Fig. 3C, D). To explore the biological pathways affected by Hic-5 KD, we performed gene ontology (GO) analysis using the downregulated genes (Fig. 3F). The pathways modulated by Hic-5 KD include actin binding, actin cytoskeleton organization, and regulation of cell morphogenesis, all of which are related to cellular differentiation, morphogenesis, and migration. To examine the overlap and potential interactions between these activated pathways, we generated a gene enrichment network plot (Fig. 3G), which enabled more detailed analysis of the pathway modules affected by Hic-5 KD. The first module involved actin filament and structure programs, including the genes NEDD9, LCP1, and ACTN1, suggesting that Hic-5 KD may disturb the normal actin filament functions22. The second module involved cell shape regulation, cell-substrate adhesion, and wound healing-related programs, including the genes PDGFB, EDN1, and FERMT2, implicating that Hic-5 may play a role in maintaining the structural integrity of the airway barrier23. Lastly, the third major module involved platelet activation, hemostasis, and coagulation programs, including the genes PDGFB, EDN1, and F3, indicating that Hic-5 is needed for hemostatic activity in the lung24.

Hic-5 deficiency protects against stress fiber formation and cell shape changes in response to mechanical compression

We have previously demonstrated that mechanical compression induces basal cell stress fiber formation that is associated with intercellular force generation during epithelial cell unjamming transition25. This stress fiber formation could be regulated by Hic-5 as indicated in our GO analysis (Fig. 3F). To validate the role of Hic-5 in stress fiber formation, we performed immunofluorescence (IF) staining for Hic-5 and F-actin in both Hic-5 WT and KD cells, with and without mechanical compression. In both conditions, Hic-5 localized predominantly to the cytosol and did not accumulate in the nucleus following mechanical compression, although its overall expression level increased (Fig. 4A). Consistent with our previous findings, compression induced basal stress fiber formation accompanied by apical cell elongation in Hic-5 WT HBE cells (Fig. 4B and Supplementary Fig. 8). In contrast, these compression-induced changes were markedly attenuated in Hic-5 KD HBE cells, indicating that Hic-5 is essential for cytoskeletal remodeling triggered by mechanical compression.

Fig. 4: Mechanical compression induces Hic-5, which then drives basal cell stress fiber formation and apical cell elongation.
figure 4

A, B Representative immunofluorescence (IF) images of Hic-5 (red), nuclei (blue), and F-actin (green) in Hic-5 WT and Hic-5 KD HBE cells at 24 h post-compression. Mechanical compression induced the expression of Hic-5 protein, which localized to the cytosol in Hic-5 WT HBE cells but was abolished in Hic-5 KD cells (A). Dotted boxes indicate regions shown expanded twofold in the insets presented in the upper right corner. Scale bars = 20 μm (10 μm in insets). Mechanical compression induced apical cell elongation and basal cell stress fiber formation in Hic-5 WT HBE cells but not in Hic-5 KD HBE cells (B). Scale bar =  20 μm, n = 5 HBE cell donors.

Hic-5 deficiency attenuates endothelin-1 secretion

We then further determined the role of Hic-5 in the regulation of PDGFB and EDN1, two top-ranked genes, as demonstrated in our RNA-seq analysis (Fig. 3E). We quantified PDGFB mRNA expression by qPCR in both WT and KD HBE cells. In Hic-5 WT HBE cells, mechanical compression markedly induced PDGFB mRNA expression by 9.6-fold compared to control (Fig. 5A). However, in Hic-5 KD HBE cells, compression-induced PDGFB expression was completely abolished. PDGF is known to be secreted from various cell types, including epithelial cells and detected at high concentrations in asthma26,27. Therefore, we also assessed the effect of Hic-5 deficiency on the secreted PDGF protein levels. However, secreted PDGF protein was undetectable by ELISA (R&D ELISA kit) under all conditions. We next validated EDN1, the second top-ranked gene highlighted in Fig. 3E, which encodes ET-1 protein. This validation was particularly intriguing, as we previously reported that mechanical compression induces ET-1 protein secretion, which in turn stimulates airway smooth muscle (ASM) contraction28. Consistent with our prior findings, in Hic-5 WT HBE cells, mechanical compression significantly induced EDN1 mRNA expression by 9.8-fold (Fig. 5B) and increased ET-1 secretion by 74% (Fig. 5C) compared to control. However, in Hic-5 KD HBE cells, the compression-induced EDN1 mRNA expression was significantly attenuated by 88% and ET-1 secretion was similarly decreased by 65% compared to the compressed condition in Hic-5 WT cells (Fig. 5B, C). Moreover, ET-1 secretion induced by TGF-β1 in Hic-5 WT was also significantly abolished in Hic-5 KD (Fig. 5D).

Fig. 5: Endothelin-1 expression and secretion depend on Hic-5.
figure 5

A, B The validation of the top two ranked DE genes between Hic-5 WT and Hic-KD were quantified by qPCR. Compression-induced expression of PDGF (A) and EDN1 (B) was observed in Hic-5 WT HBE cells but was abolished in Hic-5 KD cells (mean ± SD, n = 3 HBE cell donors). P values: two-sided Student’s t-test. C, D Secretion of endothelin-1 (ET-1) by HBE cells into the basolateral conditioned media was determined by ELISA at 24 h post-compression (C) and post-TGF-β1 treatment (D). Hic-5 deficiency (Hic-5 KD) attenuated ET-1 secretion that was induced by both compression and TGF-β1 (mean ± SD, n = 5 HBE cell donors in (C) and n = 3 HBE cell donors in (D). P values: one-way ANOVA with Bonferroni post hoc correction. In AD, each symbol represents an individual donor: open circles for control and closed circles for compression or rhTGF-β1 as indicated.

Discussion

In this study, we identified Hic-5, encoded by TGFB1I1, as a key regulator of mechanotransduction in human airway epithelial cells. Using bulk RNA-seq in well-differentiated HBE cells and reanalyzing published scRNA-seq data from human bronchial biopsies collected after allergen challenge16, we established Hic-5 as a link between our in vitro findings and bronchoconstriction-induced epithelial responses in patients with asthma. Using HBE cells exposed to mechanical compression mimicking airway epithelial cell deformation during bronchoconstriction, we demonstrated that Hic-5 was induced through pathways dependent on the TGF-β receptor and ERK. Functional analysis using Hic-5 KD combined with RNA-seq revealed a significant reduction in DEGs between control and compressed HBE cells, indicating that Hic-5 plays a key role in transcriptional regulation under mechanical stress. Our data indicate that Hic-5 mediates key compression-induced responses, including actin cytoskeleton organization and ET-1 secretion, highlighting its role as a key link between mechanical stress on the airways and ASM contraction, a critical pathological component of asthma.

Our findings have important therapeutic implications for asthma treatment. Hic-5, a member of the paxillin superfamily, functions as a focal adhesion scaffold that transduces mechanical signals from extracellular stimuli to intracellular signaling cascades11,29,30. Hic-5 has been recognized as a regulator of cellular mechanoresponses in mostly mesenchymal or cancerous cells12,13,14,29,31,32,33,34. While its superfamily member protein paxillin has been studied for its role in epithelial injury responses through focal adhesion remodeling35, the role of Hic-5 in epithelial tissues remains poorly defined. This limited understanding may be due to its low expression in mature epithelial cells, with levels increasing during EMT13,36. Consequently, Hic-5 has been studied more extensively in the context of cancer, where the EMT is a prominent feature36,37,38. Our findings provide direct evidence that mechanically induced Hic-5 initiates a cascade of events leading to airway constriction, a key component of the asthmatic response.

Our RNA-seq and qPCR analyses confirmed that mechanical compression significantly induced TGFB1I1 expression in well-differentiated primary HBE cells (Figs. 1, 2). Since TGF-β1 signaling regulates epithelial proliferation, differentiation, extracellular matrix production, and inflammation, all of which contribute to asthma pathogenesis39,40,41,42,43, Hic-5 may serve as a molecular bridge between mechanical and biochemical signaling in asthma. Elevated TGF-β1 levels in BALF, airway epithelium, and eosinophils correlate with disease severity41,42,44, and TGF-β receptor activation contributes to airway remodeling and airway hyperresponsiveness (AHR) in both mice and humans7,45,46. Therefore, we hypothesize that Hic-5 acts as a key link between TGF-β receptor activation and cellular responses to both mechanical compression and TGF-β1 stimulation. scRNA-seq data revealed that TGFB1I1 is enriched in basal cells, a progenitor population critical for airway repair and remodeling. TGFB1I1 expression increased in basal cells from asthma patients experiencing bronchoconstriction following allergen exposure16, linking Hic-5 to airway narrowing and remodeling. In addition, allergen-induced TGFB1I1 expression was also detected in allergic controls, albeit to a lesser extent than in asthma patients, suggesting that additional allergy-mediated factors may contribute to the induction of Hic-5. No baseline difference was observed between allergic controls and individuals with allergic asthma. These findings suggest that elevated Hic-5 expression is not a constitutive feature of the asthmatic airway epithelium but rather part of an active response during asthma exacerbations or allergic conditions. Given its connection to asthma exacerbations, Hic-5 induction in airway epithelial cells may represent a critical regulatory mechanism in uncontrolled asthma. Our in vitro studies examined the independent effects of mechanical compression and TGF-β1. However, investigating their additive or synergistic interactions may provide further insight, as elevated TGF-β1 levels in the asthmatic airway environment, when combined with mechanical stress, could amplify Hic-5 expression and accelerate airway remodeling.

In ALI cultures, Hic-5 protein levels progressively decreased as basal stem cells differentiated, suggesting its potential roles in basal cell homeostasis, epithelial differentiation, and regeneration. Although well-differentiated HBE cells exhibited low baseline Hic-5 expression, it became inducible by mechanical compression and TGF-β1 in a manner dependent on TGF-β receptor and ERK signaling (Fig. 2). Interestingly, although our previous work demonstrated that the EGFR–ERK axis is required for YKL-40 and EGF ligand expression in mechanically compressed cells, Hic-5 induction is independent of EGFR activation2,19. Given this apparent disconnection of EGFR and ERK in Hic-5 regulation, we further explored whether ERK activation occurs through a TGF-βR-dependent pathway. TGF-β receptor signaling operates through both canonical (SMAD2/3) and non-canonical (ERK, JNK, MAPK, and ROCK) pathways43. In HBE cells, TGF-β1 stimulation predominantly activated the canonical SMAD2/3 pathway, while mechanical compression preferentially triggered non-canonical TGF-β-ERK signaling, despite both conditions converging on Hic-5 induction. Notably, TGF-β1-induced Hic-5 has been shown to be essential for sustained TGF-β1 production through a feed-forward mechanism, in which persistently high TGF-β1 levels maintain the pathogenic myofibroblast phenotype observed in hypertrophic scar tissue47.

Our GO and gene enrichment network analyses revealed that Hic-5 regulates key cellular responses to mechanical stress, including actin filament organization, cell shape, wound healing, and coagulation activity (Fig. 3). In a previous report using trabecular meshwork cells, TGF-β2 and ET-1 have been shown to induce Hic-5 expression, which in turn regulates actin cytoskeletal organization12. In our study, we observed that Hic-5 deficiency disrupted stress fiber formation, supporting its role in the dynamic regulation of cytoskeletal organization and cell shape changes. Stress fiber formation governs cellular responses to mechanical stress by increasing stiffness and promoting cell shape elongation, thereby increasing epithelial susceptibility to mechanical injury35,48,49. In A549 cells, transmural pressure leads to the activation of NFκB in a manner dependent on actin stress fiber formation, indicating a potential role of the actin cytoskeleton in mechanotransduction-mediated inflammatory signaling50. This may underlie the mechanism of epithelial cell death and subsequent inflammation observed in models of bronchoconstriction5. The association between Hic-5 and cell shape elongation is also reported in cancer cells33, suggesting a broader role for Hic-5 in regulating cellular responses.

Our findings indicate that Hic-5 is essential for cytoskeletal remodeling in airway epithelial cells when exposed to mechanical stress. This cytoskeletal regulation, in turn, mediates mechanotransduction pathways that translate mechanical cues into transcriptional responses, including EDN1 expression. In the pseudostratified human airway epithelium, mechanical compression mimicking bronchoconstriction increases ET-1 secretion independently of airway smooth muscle, suggesting that epithelial mechanotransduction alone is sufficient to drive ET-1 secretion. Hic-5 KD markedly suppresses this induction, supporting a role for Hic-5 as a critical regulator of epithelial ET-1 secretion under mechanical stress. These findings raise the possibility that a Hic-5–ET-1 axis contributes to a feed-forward cycle of bronchoconstriction in severe asthma and provide a rationale to explore epithelial-specific Hic-5 inhibition, for example, through inhaled ASO therapy. While our findings establish that Hic-5 is required for compression-induced transcriptional regulation, it remains uncertain whether Hic-5 overexpression alone can drive these changes in HBE cells. Although Hic-5 has been reported to act as a co-activator of transcription factors such as the androgen receptor, our findings show that it does not accumulate in the nucleus of airway epithelial cells. This suggests that Hic-5 does not directly activate transcription via nuclear translocation during compression-induced mechanotransduction. Instead, it likely contributes indirectly by regulating cytoskeletal tension and actin dynamics, which can activate downstream mechanosensitive pathways such as YAP/TAZ or MRTF–SRF signaling51,52. Both pathways are well established to respond to actin stress fiber assembly and cytoskeletal tension, raising the possibility that Hic-5 functions as an upstream mediator of these mechanically regulated transcriptional processes in the airway epithelium. Prior studies in vimentin-rich fibroblasts53 further suggest that Hic-5 functions mainly as a focal adhesion adapter, supporting the possibility that Hic-5 mediates mechanotransduction but is not sufficient on its own. Future studies will be needed to determine whether Hic-5 overexpression is sufficient and to identify adaptor(s) that may substitute for vimentin in vimentin-deficient well-differentiated airway epithelium.

Our study identifies Hic-5 as a key regulator of mechanotransduction in airway epithelial cells, linking bronchoconstriction-induced mechanical stress to asthma pathogenesis. Through its roles in cytoskeleton organization and transcriptional regulation, including ET-1, Hic-5 links acute asthma exacerbations to sustained asthmatic responses and airway remodeling, the hallmark of difficult-to-treat asthma. Together, our findings provide critical mechanistic insights into how mechanical stress shapes epithelial responses and highlight Hic-5 as a potential therapeutic target for mitigating disease progression in asthma. Moreover, our data advance our understanding of how dysregulated mechanical forces drive disease progression, offering mechanistic insights into chronic conditions governed by mechanotransduction beyond the lung.

Methods

Reanalysis of published single-cell RNA-seq data

Previously published scRNA-seq data from human asthma challenge model16, human lung cell atlas17, and human in vitro cultured airway epithelial cells18 were downloaded from the respective relevant online repository and visualized using standard computational approaches.

In vitro exposure of well-differentiated primary HBE cells to mechanical compression or TGF-β1

As previously described3,4,19,20,28, we seeded primary HBE cells on transwells and maintained in ALI culture until the cells were well-differentiated. To mimic bronchoconstriction, we exposed well-differentiated HBE cells to apical-to-basal pressure with a magnitude of 30 cm H2O for 3 h, as previously described3,4,19,20,28. Time-matched control cells received 0 cm H2O pressure. We then collected cells and conditioned media between 3 and 72 h. In experiments using recombinant human (rh) TGF-β1 (Cell Signaling Technologies, Danvers, MA), we spiked 10 ng/ml into the basolateral media of HBE cells in ALI cultures and collected the cells and media at the indicated time points. To determine the signaling pathways that regulate mechanical compression-induced Hic-5 protein expression, we used pharmacological inhibitors of the TGF-β receptor (SB431542; 10 µM, Tocris, Bristol, UK), MEK (U0126; 10 µM, Tocris), and EGFR (AG1478; 10 µM, Tocris). Each inhibitor was added to the basolateral media of HBE cells 1 h prior to exposure to mechanical compression or TGF-β1. As a control, 0.1% DMSO was used.

Hic-5 knockdown using antisense oligonucleotides (ASOs)

To knock down Hic-5 expression in well-differentiated primary HBE cells, we used antisense oligonucleotides (ASOs) designed and provided by Ionis Pharmaceuticals, following the previously established ASO approach54. We initially screened five ASOs targeting the coding region of human TGFB1I1 (denoted as Hic-5 ASO). We then selected the most effective ASO based on the reduction of Hic-5 expression determined by both RT-qPCR and western blot analysis (Supplementary Fig. 5). We used this selected ASO targeting Hic-5 for subsequent experiments. As a non-targeting control, we used a scrambled ASO (denoted as control ASO) provided by Ionis Pharmaceuticals. We reconstituted lyophilized ASOs in PBS to 5 mM, aliquoted the stock ASO, and stored the aliquots at -80 °C until use. During ALI culture, we replenished basal medium containing 10 uM ASO (scrambled or Hic-5) every other day from ALI day 9 to day 19.

RNA sequencing analysis

As we previously described3,4,19,20,28, we isolated total RNA from HBE cells (n = 3 donors without a history of lung disease) using the RNeasy Mini Kit (Qiagen, Hilden, Germany). Bulk RNA sequencing was performed on a NovaSeq instrument (Illumina, San Diego, CA, USA) by the Bauer Core Facility at Harvard University.

We evaluated the quality of RNA-seq data using MultiQC (v1.9) and FastQC (v0.12.0), and filtered out sequencing reads with low-quality metrics. Transcript expression at the isoform-level was quantified using Salmon (v1.10.1), and gene-level expression values were then aggregated from the isoform-level results. DEGs between the control and compressed groups were identified using DESeq2 (v1.42.0), enabling the detection of both upregulated and downregulated genes between Hic-5-WT and Hic-5-KD samples. DEGs were defined as adjusted p value <0.05 and an absolute log2 (fold change) >0.25. The DEG results were visualized using volcano plots and heatmaps. Additionally, DESeq2 was employed to assess interaction effects between genotypes (i.e., Hic-5 WT vs. Hic-5 KD) and experimental conditions (i.e., control vs. compression). GO and pathway enrichment analyses were performed on significant DEGs from each comparison using clusterProfiler (v4.8.2). To facilitate efficient identification of functional modules, gene enrichment networks were constructed with the enrichplot package (v1.26.5). All data analyses and visualizations were conducted using R (v4.3.2) in RStudio (v2023.09.1).

RT-qPCR

We performed real-time RT-qPCR using the primers (Supplementary Table 2) as previously described4,19. After normalization to GAPDH, the fold changes were calculated by the comparative 2−ΔΔCt method55. To compare mRNA expression relative to GAPDH over the course of ALI culture, we calculated 2−ΔCt.

Western blot analysis

We detected proteins in cell lysates by western blot analysis as previously described4. We used the following primary antibodies according to the manufacturer’s instructions: Hic-5 (#6114) purchased from BD Biosciences (Woburn, MA); E-cadherin (#3195), GAPDH (#5174S), p-ERK (#4370S), p-SMAD2 (#3108), and p-SMAD3 (#9520) purchased from Cell Signaling Technology (Danvers, MA). We detected GAPDH as a loading control. Blot images were captured using Syngene GeneSys software (v1.7.9; Syngene, Cambridge, UK), and protein intensity was analyzed using ImageJ software (v1.46; National Institutes of Health, Bethesda, MD, USA).

Immunofluorescence staining

Using our previously described immunofluorescence staining protocol25, we stained cells for F-actin using phalloidin conjugated to AlexaFluor 488 (A12379; Thermo Fisher Scientific, Waltham, MA), at 24 h after compression. Cells were counterstained with Hoescht (33342; Thermo Fisher Scientific) for nuclei. Samples were imaged at 20× magnification using an Axio Observer fluorescence microscope (Zeiss, Danvers, MA, USA) and processed using Zeiss ZEN software (blue edition, v3.3) and ImageJ software (v1.46; National Institutes of Health, Bethesda, MD, USA).

ELISA

We measured the amount of ET-1 protein released into basolateral conditioned media using a human-specific ELISA kit (DET100; R&D Systems, Minneapolis, MN), according to the vendor’s instructions.

Statistical analysis

All the data, except for RNA-seq data, were analyzed using GraphPad Prism (San Diego, CA). Statistical significance was determined using a two-tailed Student’s t-test in experiments comparing two groups, or a two-way ANOVA followed by Bonferroni or Holm-Šídák post hoc corrections in experiments comparing three or more groups. A p  <  0.05 was considered statistically significant.

Ethics statement

All studies were conducted in accordance with relevant ethical regulations. The study protocol was reviewed and approved by the Committee on Microbiological Safety at Harvard University (approval no. 21-274). We used primary HBE cells isolated at the Marsico Lung Institute/Cystic Fibrosis Research Center, the University of North Carolina (UNC), Chapel Hill. Donor lungs were obtained under a protocol approved by the UNC Institutional Review Board (approval no. 03-1396). Informed consent was obtained from the legally authorized representatives of all organ donors. In this work, we used primary HBE cells from seventeen donors with no history of smoking or lung disease (Supplementary Table 1).

Reporting summary

Further information on research design is available in the Nature Portfolio Reporting Summary linked to this article.