Abstract
Differential growth between tissues generates mechanical conflicts influencing organogenesis in plants. Here we use the anther, the male floral reproductive organ, as a model system to understand how cell dynamics and tissue-scale mechanics control 3D morphogenesis of a complex shape. Combining deep live-cell imaging, growth analysis, osmotic treatments, genetics and mechanical modelling, we show that localized expansion of internal cells actively drives anther lobe outgrowth, while the epidermis stretches in response. At later stages, mechanical load is transferred to the sub-epidermal layer (endothecium), contributing to proper organ shape. We propose the concept of ‘inflation potential’, encapsulating mechanical and anatomical features causing differential growth. Our data emphasize the active mechanical role of inner tissue in controlling both organ shape acquisition and cell dynamics in outer layers.
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Data availability
The data used to quantify growth parameters, models and starting templates with a copy of the MDX software are available to download from the Open Science Framework repository at https://osf.io/h8r76/?view_only=46b882efd7ec4c55ab798f7f992504ab (ref. 72).
Code availability
The Python scripts used to analyse data are available to download from the Open Science Framework repository at https://osf.io/h8r76/?view_only=46b882efd7ec4c55ab798f7f992504ab (ref. 72).
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Acknowledgements
We thank N. Boodhoo and T. Stan for help with image segmentations; S. Strauss for help with MorphoGraphX 2.0; G. Mosca and B. Lane for help with MorphoDynamX; K. Jonsson for seeds of qua2-1 mutant crossed with membrane marker line; and K. Jonsson and A. Bauer for critical reading of the paper. This work was supported by a New Frontiers in Research Fund Exploration grant (no. NFRFE-2018-00953) from the Government of Canada (D.K., A.-L.R.-K. and F.P.G.), Natural Sciences and Engineering Research Council of Canada Discovery grant RGPIN-2018-05762 (A.-L.R.-K.), Natural Sciences and Engineering Research Council of Canada Discovery grant RGPIN-2018-04897 (D.K.), Natural Sciences and Engineering Research Council of Canada Discovery grant RGPIN-2019-07072 (F.P.G.), Human Frontier Science Program research grant RGY0077/2021 (A.-L.R.-K.), and a Biotechnological and Biological Sciences Research Council Institute Strategic Programme Grant to the John Innes Centre BB/X01102X/1 (R.S.S.). This research was also supported in part by grant NSF PHY-2309135 to the Kavli Institute for Theoretical Physics (KITP) (D.K. and A.-L.R.-K.), and Centre SÈVE - strategic regroupement of the Fonds de Recherche du Québec Nature et Technologies (D.K. and A.-L.R.-K.). Confocal imaging was conducted using the instrument supported by Canada Foundation for Innovation grants (37805) (D.K.).
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S.R.S., L.C., A.-L.R.-K. and D.K. conceived and designed the experiments. S.R.S., L.C., S.M.H., A.-L.R.-K. and D.K. developed methods. L.C., F.P.G., R.S.S. and A.-L.R.-K. conceived and designed the computational models. S.R.S., A.B.-Z., L.C. and D.K. performed experiments and extracted data with help from L.L. and S.M.H.; S.R.S., L.C., A.-L.R.-K. and D.K. analysed the data. A.-L.R.-K. and D.K. supervised the project. S.R.S., L.C., A.-L.R.-K. and D.K. wrote the manuscript with input from all other authors. A.-L.R.-K., D.K., F.P.G. and R.S.S. provided funding. All authors reviewed the manuscript.
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Extended data
Extended Data Fig. 1 Localized growth in inner tissue underlies lobe formation.
a, Quantification of cell area increase per anther region (n represent cell number for consecutive measurement for each sample from top to bottom: 5, 17, 9, 25, 15, 42, 21, 62; 8, 15, 11, 17, 17, 27, 24, 22; 12, 14, 23, 28, 43, 62; and 14, 11, 17, 17, 25, 20). b, Quantification of cell volume increase per anther region (n represent cell number for consecutive measurement for each sample from top to bottom: 5, 4, 14, 19, 10, 8, 27, 29, 14, 25, 42, 34, 21, 48, 62, 34; 8, 6, 14, 12, 11, 13, 17, 17, 16, 26, 28, 25, 24, 43, 22, 5; 14, 13, 24, 31, 28, 53, 45, 75, 62, 124, 66, 80; and 14, 10, 13, 23, 17, 26, 16, 46, 25, 41, 19, 38). Each of the four time-lapse series that were normalized and pooled in the boxplots shown in Fig. 1. In box plots, the lines represent the median and dots represent the mean values, the edges of the boxes define interquartile ranges, the whiskers represent 90% confidence intervals. For each time-point different letters indicate statistical significance determined by two-sided Mann Whitney U test (P < 0.05).
Extended Data Fig. 2 Cube of cube model details.
a to c, Cross-section of the model template of the cube of cubes. a, Outer layer of the tissue with constant properties. It is of total size Lout = Uoutlout where Uout is the number of cells along the side of the cubic tissue and lout the side of those cells. b, Inner tissue of total size Lin = (Uout-2)lout. It is made of UinxUinxUin cells of size lin = Lin/Uin. c, Assembled outer layer and inner tissue. d, Detailed view of Fig. 2b. Color scale: Trace of the Green-Lagrangian strain tensor Tr(ε) per element. (e and f) For each parameter Et, s, and P, areal strains (in %) of anticlinal walls within inner e and outer f cells are plotted against the ratio of inflation potential in inner vs outer cells.
Extended Data Fig. 3 Measurements of cell wall thickness and Incipient plasmolysis analysis in ~4 days old anthers.
a, Representative transmission electron microscopy micrograph of an anther lobe at a stage before lobation. Brackets indicate the layers considered for measurements as shown in Fig. 2e, epidermis (magenta) and inner tissue (green). Insets show segmented lines used to quantify cell wall thickness shown in Fig. 2f. b, Confocal images of anthers, before and after osmotic treatment with solutions of increasing NaCl concentration. The top row shows epidermis while the bottom row shows digital cross sections in the inner tissue. Arrow heads indicate the interstitial spaces created at incipient plasmolysis. Scale bars, 2.5 μm (a), 10 μm (b).
Extended Data Fig. 4 Obtaining the starting mesh for stiffness reverse-engineering.
a, 2D meshes extracted from the top-to-bottom and bottom-to-top confocal microscopy scans of the same plasmolyzed sample Cell junctions are highlighted in red. We compute the transformation from one 3D point cloud to the other, M b, Starting mesh and transformed mesh obtained by applying half the transformation M1/2 to the former. The heatmap of volume increase of each cell from the plasmolyzed experimental state to the turgid. c, Pooling of cells into regions. Regions are based on layer, connectivity and volume increase displayed in b. Scale bars, 5 μm.
Extended Data Fig. 5 Convergence of reverse engineering and significance of results.
a, Convergence of the volume distribution of all cells of each sample over the reverse engineering steps. b, For each sample: final volume increase distributions from the plasmolyzed state to the turgid state, simulated and experimental. c, Guessing of the next stiffness of a given cell. A linear trend is drawn from the two previous states (En-2,Vn-2) and (En-1,Vn-1), and the intersection between this line and the V = Vexp horizontal line yields the new cell stiffness EGuess. d, Stiffness values after the 20th reverse engineering step per region and stiffness ratios between regions of interest. An inner/outer gradient can be observed for each sample in the locule region.
Extended Data Fig. 6 Lobe development is abolished in the absence of localized internal growth in the locule.
a, Digital cross sections of a time-lapse series of the developing spl-1 anther. b, Heat maps of volume increase in anther epidermis and inner tissue. c-d, Quantification of volume increase per anther region in the epidermis (n = 16, 23, 64, 92 cells in lobe, 26, 48, 128, 182 in connective, at consecutive time points and inner tissue (n = 10, 27, 80, 73 cells in lobe, and 42, 66, 163, 109 in the connective tissue; 4 independent time-lapse series). In box plots, the lines represent the median and dots represent the mean values, the edges of the boxes define interquartile ranges, the whiskers represent 90% confidence intervals. No statistical significance was found by two-sided Mann Whitney U test (P < 0.01). Mann-Whitney U test, P < 0.01 was detected Scale bars, 20 μm (a and b).
Extended Data Fig. 7 The epidermis in the anther lobe is under local tension.
a, Digital longitudinal cross sections of the anther lobe (top) and tip of connective (bottom) for wild type (left) and spl/nzz (right). Arrows indicate intercellular spaces. b-c, Quantification of ratio between cell growth within the organ plane and growth in cell thickness, per anther region in the epidermis in wild type (b) and spl-1 (c) (n = 13, 49, 77, 134, 175 cell in lobe epidermis, 32, 81, 132, 172, 195 cells in connective epidermis in wild type, 16, 22, 63, 92, 103 cells in lobe epidermis, 26, 47, 127, 182, 205 cells in connective epidermis of the mutant at consecutive time points; 4 independent time-lapse series). In box plots, the lines represent the median and dots represent the mean values, the edges of the boxes define interquartile ranges, the whiskers represent 90% confidence intervals. Asterisks indicate statistical significance determined by two-sided Mann Whitney U test (P < 0.01). d, Confocal images of dissected qua2-1 mutant anther. Insets show details of mid connective (left), tip of connective (top), and lobe (right). Arrows indicate points of cell detachments in the epidermis. Scale bars, 10 μm (a) 20 μm (d).
Extended Data Fig. 8 Cylindrical Voronoï construction and simulation.
a, Construction of the cylindrical epidermis. b, 3D view of the cylindrical epidermis. c, 2D simplified schematic of the spring network used to place the Voronoï diagram control points within the epidermis. d, Symmetries of the cloud point and Voronoï diagram generation. e, Final Voronoï diagram. f, 3D view of a cylindrical Voronoï model. g, Side view of the model. Continuous red line indicates immobile vertices along the z axis. Dotted red line indicates the mobile plane that will adjust the axial force the model is subjected to. dn is the current displacement of that plane. h, Estimation of the next displacement dn based on the previous steps (dn-2, Fn-2) and (dn-1, Fn-1) shown as green dots and the goal force of 0 N. The new state (dn, Fn) is represented as the red dot.
Extended Data Fig. 9 Construction of the flat twin model for the epidermis.
a, Left side: Initial states of the voronoï in ring model and of the corresponding flat twin. Right side: Final states after pressurization. b, Superpositions of the initial and final simulation states of the flat twin model in the xz and yz planes respectively. The cell walls marked in red remain flat due to boundary conditions. The same walls in the yz plane are also moved to match the stretching of the epidermis. c, Tissue circumferential tension for varying inner over outer inflation potential ratios plotted against the organ radius before pressurization. d, Ratio of the tissue circumferential tension over the tissue vertical tension, plotted against the organ radius before pressurization. e, Pressurized voronoï in ring models for different inner inflation potentials and tissue sizes. Color scales: Trace of the Green-Lagrangian strain tensor per element (a and e).
Extended Data Fig. 10 Emergence of endothecium reduces tension in the epidermis.
(a) Representative digital cross-sections of the anther lobe region in WT, bam1bam2, and spl-1 from around 3 to 13 days*. Asterisk indicates estimated days after initiation. (b) Quantification of cell area per lobe region in WT anthers (n = 35, 36, 35, 53, 31, 70, 18, 20 cells in epidermis; 10, 18, 34, 22, 50, 15, 15 cells in endothecium; 59, 41, 19, 24, 13, 26, 19, 14 cells in inner tissue at consecutive time points; 5 independent inflorescences). (c) Example of transmission electron microscopy micrograph of an anther lobe after ‘butterfly’ shape acquisition. Brackets indicate the layers considered for measurements. (d) Quantification of cell wall thickness in different layers of the lobe (n = 24 walls in epidermis, 24 walls in endothecium, and 38 walls in inner tissue; 3 independent anthers). (e) Quantification of volume increase per region in 12 h interval (n = 88, 78 cells in epidermis, 36 cells in endothecium, and 42, 54 cells in inner tissue at consecutive time points; 4 independent time lapse series). In box plots, the lines represent the median and dots represent the mean values, the edges of the boxes define interquartile ranges, the whiskers represent 90% confidence intervals. For each time-point different letters indicate statistical significance determined by two-sided Mann Whitney U test (p < 0.01). Scale bar, 40 μm (a) 2.5 μm (b).
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Silveira, S.R., Collet, L., Haque, S.M. et al. Mechanical interactions between tissue layers underlie plant morphogenesis. Nat. Plants 11, 909–923 (2025). https://doi.org/10.1038/s41477-025-01944-8
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DOI: https://doi.org/10.1038/s41477-025-01944-8


