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Showing 1–50 of 231 results
Advanced filters: Author: Liming Zhu Clear advanced filters
  • By post-tuning the GQD primitive membrane through heat treatment and in-situ crosslinking of small molecule amines, the as-prepared membrane achieved excellent CO2 separation performance and was further extended to the C3H6/C3H8 separation system.

    • Xinjing Zhang
    • Qiuxia Feng
    • Weishen Yang
    ResearchOpen Access
    Nature Communications
    P: 1-11
  • The APOE-ε4 allele is the strongest genetic risk factor for late-onset Alzheimer’s disease, but it is not deterministic. Here, the authors show that common genetic variation changes how APOE-ε4 influences cognition.

    • Alex G. Contreras
    • Skylar Walters
    • Timothy J. Hohman
    ResearchOpen Access
    Nature Communications
    Volume: 17, P: 1-17
  • How metabolic changes regulate human endoderm differentiation remains unclear. Here, the authors show that a TGFβ-driven metabolic switch reduces lactate production and enhances the TCA cycle, which controls ATP-dependent BAF complex activity to promote definitive endoderm differentiation.

    • Liming Meng
    • Jing Lv
    • Wei Jiang
    ResearchOpen Access
    Nature Communications
    Volume: 17, P: 1-17
  • The longevity of leaves determines the overall duration of photosynthesis for plants. This study suggests that climate change drives leaf longevity convergence toward intermediate ranges, which, by altering leaf traits and enhancing photosynthetic capacity, strengthens ecosystem stability and is closely linked to vegetation diversity.

    • Meimei Xue
    • Xueqin Yang
    • Chaoyang Wu
    ResearchOpen Access
    Nature Communications
    Volume: 17, P: 1-13
  • In osteoporotic fracture-related infection (FRI), coordinated bone healing is compromised by cortical bone lysis and persistent bacterial colonization. Here, Li et al. report a dual-action nanocomposite bisphosphonates hydrogel for treatment of osteoporotic FRI that preserves cortical bone integrity and restores fracture healing.

    • Jie Li
    • Yang Zhang
    • Zhen Liu
    ResearchOpen Access
    Nature Communications
    Volume: 17, P: 1-18
  • Multifunctional underwater sensors with integrated self-powered signal transmission, effective thermal-moisture regulation, and multi-signal decoupling are desirable of underwater tasks. Here, the authors report a three-dimensional thermoelectric device composed of porous polyurethane foam coated with a waterproof conductive layer for human-machine interaction in aquatic settings.

    • Wendi Liu
    • Xiao-Lei Shi
    • Zhi-Gang Chen
    ResearchOpen Access
    Nature Communications
    Volume: 17, P: 1-14
  • Thoracic vertebral segment-specific spinal cord organoids transplanted in a spinal cord injury mouse model can precisely match the transplantation site, establish synaptic connections, enhance in vivo neuroelectric conduction and restore motor function.

    • Yanjing Zhu
    • Ruiqi Huang
    • Rongrong Zhu
    ResearchOpen Access
    Nature Biomedical Engineering
    P: 1-21
  • A circular economy approach applied to the global lithium-ion battery supply chain shows that combining cross-regional cooperation on technology and trade with regionally tailored domestic circular economy policies yields the highest global emission reduction.

    • Mengyu Zhai
    • Yufeng Wu
    • Tieyong Zuo
    Research
    Nature
    Volume: 646, P: 1114-1121
  • The development of robust catalysts that could work under high current densities brings promise but is a challenge in CO2 electroreduction. Here, the authors report a wettability-engineered electrode design for ethylene electrosynthesis that operates over 1000 h without salt precipitation.

    • Mingwei Fang
    • Zihao Huang
    • Lei Jiang
    ResearchOpen Access
    Nature Communications
    Volume: 17, P: 1-12
  • A genome-wide association meta-analysis study of blood lipid levels in roughly 1.6 million individuals demonstrates the gain of power attained when diverse ancestries are included to improve fine-mapping and polygenic score generation, with gains in locus discovery related to sample size.

    • Sarah E. Graham
    • Shoa L. Clarke
    • Cristen J. Willer
    Research
    Nature
    Volume: 600, P: 675-679
  • The flagship paper of the ICGC/TCGA Pan-Cancer Analysis of Whole Genomes Consortium describes the generation of the integrative analyses of 2,658 cancer whole genomes and their matching normal tissues across 38 tumour types, the structures for international data sharing and standardized analyses, and the main scientific findings from across the consortium studies.

    • Lauri A. Aaltonen
    • Federico Abascal
    • Christian von Mering
    ResearchOpen Access
    Nature
    Volume: 578, P: 82-93
  • Integrative analyses of transcriptome and whole-genome sequencing data for 1,188 tumours across 27 types of cancer are used to provide a comprehensive catalogue of RNA-level alterations in cancer.

    • Claudia Calabrese
    • Natalie R. Davidson
    • Christian von Mering
    ResearchOpen Access
    Nature
    Volume: 578, P: 129-136
  • Crystal structure determination from powder X-ray diffraction is challenging but vital for materials research. Here, authors develop PXRDGen, an AI system that automatically solves crystal structures with 96% accuracy across thousands of compounds.

    • Qi Li
    • Rui Jiao
    • Xiaolong Chen
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-10
  • It is uncertain how much life expectancy of the Chinese population would improve under current and greater policy targets on lifestyle-based risk factors for chronic diseases and mortality behaviours. Here we report a simulation of how improvements in four risk factors, namely smoking, alcohol use, physical activity and diet, could affect mortality. We show that in the ideal scenario, that is, all people who currently smokers quit smoking, excessive alcohol userswas reduced to moderate intake, people under 65 increased moderate physical activity by one hour and those aged 65 and older increased by half an hour per day, and all participants ate 200 g more fresh fruits and 50 g more fish/seafood per day, life expectancy at age 30 would increase by 4.83 and 5.39 years for men and women, respectively. In a more moderate risk reduction scenario referred to as the practical scenario, where improvements in each lifestyle factor were approximately halved, the gains in life expectancy at age 30 could be half those of the ideal scenario. However, the validity of these estimates in practise may be influenced by population-wide adherence to lifestyle recommendations. Our findings suggest that the current policy targets set by the Healthy China Initiative could be adjusted dynamically, and a greater increase in life expectancy would be achieved.

    • Qiufen Sun
    • Liyun Zhao
    • Chan Qu
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-11
  • Whole-genome sequencing data for 2,778 cancer samples from 2,658 unique donors across 38 cancer types is used to reconstruct the evolutionary history of cancer, revealing that driver mutations can precede diagnosis by several years to decades.

    • Moritz Gerstung
    • Clemency Jolly
    • Christian von Mering
    ResearchOpen Access
    Nature
    Volume: 578, P: 122-128
  • Multi-omics datasets pose major challenges to data interpretation and hypothesis generation owing to their high-dimensional molecular profiles. Here, the authors develop ActivePathways method, which uses data fusion techniques for integrative pathway analysis of multi-omics data and candidate gene discovery.

    • Marta Paczkowska
    • Jonathan Barenboim
    • Christian von Mering
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-16
  • In this study the authors consider the structural variants (SVs) present within cancer cases of the ICGC/TCGA Pan-Cancer Analysis of Whole Genomes (PCAWG) Consortium. They report hundreds of genes, including known cancer-associated genes for which the nearby presence of a SV breakpoint is associated with altered expression.

    • Yiqun Zhang
    • Fengju Chen
    • Christian von Mering
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-14
  • A large genome-wide association study of more than 5 million individuals reveals that 12,111 single-nucleotide polymorphisms account for nearly all the heritability of height attributable to common genetic variants.

    • Loïc Yengo
    • Sailaja Vedantam
    • Joel N. Hirschhorn
    ResearchOpen Access
    Nature
    Volume: 610, P: 704-712
  • LC-MS-based proteomics often relies on data-dependent acquisition (DDA) for quality control. Here, the authors demonstrate that data-independent acquisition (DIA) outperforms DDA in detecting subtle changes in LC-MS status in large-scale quantitative proteomics experiments. They further prioritized 15 QC metrics and developed an AI model, implemented in a free software called iDIA-QC, for detecting LC-MS faults.

    • Huanhuan Gao
    • Yi Zhu
    • Tiannan Guo
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-13
  • Strong bulk van der Waals materials can be created from water-mediated densification of two-dimensional nanosheets by near-room-temperature moulding, establishing a pathway for the energy-efficient fabrication of a wide range of bulk van der Waals materials and even composites for various applications.

    • Tom Lawson
    • Liming Dai
    News & Views
    Nature Materials
    Volume: 23, P: 581-582
  • Understanding deregulation of biological pathways in cancer can provide insight into disease etiology and potential therapies. Here, as part of the PanCancer Analysis of Whole Genomes (PCAWG) consortium, the authors present pathway and network analysis of 2583 whole cancer genomes from 27 tumour types.

    • Matthew A. Reyna
    • David Haan
    • Christian von Mering
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-17
  • There’s an emerging body of evidence to show how biological sex impacts cancer incidence, treatment and underlying biology. Here, using a large pan-cancer dataset, the authors further highlight how sex differences shape the cancer genome.

    • Constance H. Li
    • Stephenie D. Prokopec
    • Christian von Mering
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-24
  • Analyses of 2,658 whole genomes across 38 types of cancer identify the contribution of non-coding point mutations and structural variants to driving cancer.

    • Esther Rheinbay
    • Morten Muhlig Nielsen
    • Christian von Mering
    ResearchOpen Access
    Nature
    Volume: 578, P: 102-111
  • In somatic cells the mechanisms maintaining the chromosome ends are normally inactivated; however, cancer cells can re-activate these pathways to support continuous growth. Here, the authors characterize the telomeric landscapes across tumour types and identify genomic alterations associated with different telomere maintenance mechanisms.

    • Lina Sieverling
    • Chen Hong
    • Christian von Mering
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-13
  • With the generation of large pan-cancer whole-exome and whole-genome sequencing projects, a question remains about how comparable these datasets are. Here, using The Cancer Genome Atlas samples analysed as part of the Pan-Cancer Analysis of Whole Genomes project, the authors explore the concordance of mutations called by whole exome sequencing and whole genome sequencing techniques.

    • Matthew H. Bailey
    • William U. Meyerson
    • Christian von Mering
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-27
  • Whole-genome sequencing data from more than 2,500 cancers of 38 tumour types reveal 16 signatures that can be used to classify somatic structural variants, highlighting the diversity of genomic rearrangements in cancer.

    • Yilong Li
    • Nicola D. Roberts
    • Christian von Mering
    ResearchOpen Access
    Nature
    Volume: 578, P: 112-121
  • Viral pathogen load in cancer genomes is estimated through analysis of sequencing data from 2,656 tumors across 35 cancer types using multiple pathogen-detection pipelines, identifying viruses in 382 genomic and 68 transcriptome datasets.

    • Marc Zapatka
    • Ivan Borozan
    • Christian von Mering
    ResearchOpen Access
    Nature Genetics
    Volume: 52, P: 320-330
  • Analysis of cancer genome sequencing data has enabled the discovery of driver mutations. Here, as part of the ICGC/TCGA Pan-Cancer Analysis of Whole Genomes (PCAWG) Consortium the authors present DriverPower, a software package that identifies coding and non-coding driver mutations within cancer whole genomes via consideration of mutational burden and functional impact evidence.

    • Shimin Shuai
    • Federico Abascal
    • Christian von Mering
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-12
  • Some cancer patients first present with metastases where the location of the primary is unidentified; these are difficult to treat. In this study, using machine learning, the authors develop a method to determine the tissue of origin of a cancer based on whole sequencing data.

    • Wei Jiao
    • Gurnit Atwal
    • Christian von Mering
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-12
  • The authors present SVclone, a computational method for inferring the cancer cell fraction of structural variants from whole-genome sequencing data.

    • Marek Cmero
    • Ke Yuan
    • Christian von Mering
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-15
  • Many tumours exhibit hypoxia (low oxygen) and hypoxic tumours often respond poorly to therapy. Here, the authors quantify hypoxia in 1188 tumours from 27 cancer types, showing elevated hypoxia links to increased mutational load, directing evolutionary trajectories.

    • Vinayak Bhandari
    • Constance H. Li
    • Christian von Mering
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-10
  • The characterization of 4,645 whole-genome and 19,184 exome sequences, covering most types of cancer, identifies 81 single-base substitution, doublet-base substitution and small-insertion-and-deletion mutational signatures, providing a systematic overview of the mutational processes that contribute to cancer development.

    • Ludmil B. Alexandrov
    • Jaegil Kim
    • Christian von Mering
    ResearchOpen Access
    Nature
    Volume: 578, P: 94-101
  • Cancers evolve as they progress under differing selective pressures. Here, as part of the ICGC/TCGA Pan-Cancer Analysis of Whole Genomes (PCAWG) Consortium, the authors present the method TrackSig the estimates evolutionary trajectories of somatic mutational processes from single bulk tumour data.

    • Yulia Rubanova
    • Ruian Shi
    • Christian von Mering
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-12
  • In this work, authors elucidate DNA methylation differences in infants with severe bronchiolitis and how these are linked to childhood respiratory outcomes. Implications in neutrophil activity, inflammatory protein levels (e.g., IL1RL1), and biological pathways of immune functions are also explored.

    • Yijun Li
    • Zhaozhong Zhu
    • Liming Liang
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-14
  • While the ligand coordination microenvironment surrounding catalytic centres influences reactivity, dynamic oxygen reconstruction during water oxidation electrocatalysis complicates structure-based mechanistic insights. Now the in situ formation of lattice O–O ligands has been shown to activate Fe centres in metal oxides and hydroxides, thereby enhancing their oxygen evolution reaction activity.

    • Guoshuai Shi
    • Jili Li
    • Liming Zhang
    Research
    Nature Chemistry
    Volume: 17, P: 1607-1614
  • This paper shows that the uniformity of vitreous ice thickness relies on the surface flatness of the supporting film, and presents a method to use ultraflat graphene as the support for cryo-EM specimen preparation.

    • Liming Zheng
    • Nan Liu
    • Hailin Peng
    ResearchOpen Access
    Nature Methods
    Volume: 20, P: 123-130
  • It is challenging to produce biomass FG continuously due to the lack of an integrated device. Here, we create an integrated automatic system with energy requirement-oriented allocation to achieve continuous biomass FG production with a much lower carbon footprint.

    • Xiangdong Zhu
    • Litao Lin
    • Yong-Guan Zhu
    ResearchOpen Access
    Nature Communications
    Volume: 15, P: 1-11