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MGAT1 is a glycosyltransferase critical for the synthesis and maturation of complex N-glycans. Here, the authors show that MGAT1 modulation of CD73 glycosylation and function regulates tumor immune response in triple-negative breast cancer.

An initial draft of the human pangenome is presented and made publicly available by the Human Pangenome Reference Consortium; the draft contains 94 de novo haplotype assemblies from 47 ancestrally diverse individuals.

Protected areas across mega-diverse Southeast Asia are associated with elevated vertebrate biodiversity inside their boundaries and in surrounding areas.

Many experimentally known high-pressure ice phase are structurally very similar. Here authors elucidate the phase behaviour of the high-pressure insulating ices and reveal solid-solid transition mechanisms not known in other systems.

White adipose tissue (WAT) dysfunction leads to ageing-related metabolic disorders. Here, the authors show that the FMO3-TMAO axis in adipocytes induces senescence and inflammation in WAT microenvironment via NLRP3 inflammasome, leading to systemic glucose, lipid, and energy dysregulation in ageing

The role of ecological trade-offs in delineating species distribution is often unclear. This study finds that the rapid expansion of A. thaliana in Europe is explained by dispersal ability, but relict genetic variants for competitive ability and stress resistance are maintained at the range margins.

Fu et al. uncover the features that allow the HIV capsid to cross the permeability barrier of nuclear pores in an importin-independent manner, explaining how the viral genome can reach the nuclear compartment when infecting nondividing cells.

How lateral entorhinal cortex (LEC) neurons integrate both spatial and temporal information are not fully understood. Here authors showed that LEC neurons could change their firing rate at specific locations to signal temporal information, which provides a way to combine spatial and temporal information in the hippocampal episodic memory system.

Common photovoltaic effect is across the interface of heterojunctions. Here, the authors find that scanning a light beam can induce a persistent in-plane photoelectric voltage along silicon-water interfaces, due to the following movement of a charge packet in the vicinity of the silicon surface.

Monitoring charge carrier dynamics and photocatalytic reaction rates in individual photocatalyst particles is a challenging task that can help us to understand structure–reactivity relationships. Here single-molecule fluorescence imaging is coupled with femtosecond interferometric scattering microscopy to investigate these properties in 2D InSe flakes.

scATAC-Seq yields data that is extremely sparse. Here, the authors present a computationally efficient imputation method called scOpen that improves the downstream analyses of scATAC-Seq data and use it to identify transcriptional regulators of kidney fibrosis.

T cells have been shown to have a function in chronic lung inflammation in COPD. Here the authors characterise the single cell transcriptional profile of T cells after smoke inhalation in mouse models showing changes in TCR repertoire and Il17a expression in γδ T cells, suggesting smoke-associated γδ T cells are involved in COPD inflammation and implicating γδT17 cells as a possible target for early prevention and treatment of COPD.

Distinguishing glioblastoma and primary central nervous system lymphoma (PCNSL) remains challenging due to their overlapping pathology features. Here, the authors develop a computational tool, PICTURE, for differentiating similar pathological features enabling improved diagnosis of CNS tumours.

The flagship paper of the ICGC/TCGA Pan-Cancer Analysis of Whole Genomes Consortium describes the generation of the integrative analyses of 2,658 cancer whole genomes and their matching normal tissues across 38 tumour types, the structures for international data sharing and standardized analyses, and the main scientific findings from across the consortium studies.

The authors find that O-GalNAc transferase 2 (GALNT2) restricts viral infection, probably through the regulation of the proteolytic processing of viral glycoproteins via its O-linked glycosylation activity, impairing virus–cell fusion.

A study introduces AI²BMD, an artificial intelligence-based dynamics simulation program that uses protein fragmentation with a machine learning force field to accurately and efficiently model the folding and unfolding of large proteins.

This genome-wide association study identifies CELL DIVISION CYCLE-ASSOCIATED PROTEIN 7 (CDCA7) as a regulator of DNA methylation in natural Arabidopsis thaliana populations. CDCA7 binds the chromatin remodeller DDM1 and modulates the control of CG methylation.

Phenotypic screens in organoids and primary cells are scaled up using perturbation pooling.

Breakage-fusion-bridge (BFB) is a mechanism that leads to complex genome rearrangements in multiple cancers. Here, the authors develop a computational method for identifying these events, even when further complicated by additional structural variations.

This work presents hifiasm-meta, a software tool designed for assembling metagenomes using high-accuracy long-read data.

Zeng et al. analyzed cfDNA methylation and fragmentomic data from 1,294 patient plasma samples across 14 major cancer types to present a comprehensive landscape of pancancer and cancer-specific cell-free DNA methylation and fragmentomic features.

A large genome-wide association study of more than 5 million individuals reveals that 12,111 single-nucleotide polymorphisms account for nearly all the heritability of height attributable to common genetic variants.

PHLOWER leverages single-cell multimodal data to infer complex, multi-branching cell differentiation trajectories.

In contrast to the classical streaming potential relying on downstream ionic diffusion, an upstream proton diffusion within two-dimensional nanochannels is found to continuously generate electricity, advancing hydrovoltaic technology.

Trained and validated on multimodal data from 14.5 million images from multicountry datasets, a foundation model is shown to increase diagnostic and referral accuracy of clinicians when used as an assistant in a trial involving 16 ophthalmologists and 668 patients.

Identifying jets originating from heavy quarks plays a fundamental role in hadronic collider experiments. In this work, the ATLAS Collaboration describes and tests a transformer-based neural network architecture for jet flavour tagging based on low-level input and physics-inspired constraints.

Assembly of phased human genomes is achieved by combining long reads and long-range conformational data.

Diffusion models have shown promise in content generation, however, like many forms of generative AI, this comes with high computation cost, exacerbated by standard von Neuman computing architectures. Here, Cheng et al present a magnetoelectric memory for in-memory computing and demonstrate diffusion-based image generation on an 80×80 array.

Neurodegenerative disorders remain poorly treated despite their growing disease burden. Here, authors developed a multiplexed screening platform that identified DNAJB6 as a modulator of condensate maturation and suppressor ALS/FTD-linked toxicity.

Reactive capture bypasses CO₂ regeneration, enabling efficient CO production but with low Faradaic efficiency. The authors report a Ni–N₃ molecular catalyst that resists amino acid adsorption and promotes efficient CO production in amino-acid systems.

A new version of nanorate DNA sequencing, with an error rate lower than five errors per billion base pairs and compatible with whole-exome and targeted capture, enables epidemiological-scale studies of somatic mutation and selection and the generation of high-resolution selection maps across coding and non-coding sites for many genes.

The authors conducted a comprehensive exome-wide association analysis on eight sleep-related traits. The researchers identified 22 new genes associated with various aspects of sleep, such as chronotype, daytime sleepiness, daytime napping, snoring and sleep apnoea, highlighting the importance of large-scale genomic studies in unravelling the genetic basis of sleep-related traits.

With the generation of large pan-cancer whole-exome and whole-genome sequencing projects, a question remains about how comparable these datasets are. Here, using The Cancer Genome Atlas samples analysed as part of the Pan-Cancer Analysis of Whole Genomes project, the authors explore the concordance of mutations called by whole exome sequencing and whole genome sequencing techniques.

A multi-ancestry genome-wide gene–smoking interaction study identifies 13 new loci associated with serum lipids.

Cortical thickness is asymmetric, and cortical thinning occurs with age and in disease. Here the authors investigate if both cortices thin at the same rate or if the thicker hemisphere declines faster in aging and in Alzheimer’s disease.

Cheng et al. explore the universality and cultural variability in how people understand human relationships, revealing a five-dimensional framework for relationship concepts across both modern and ancient societies.

A scalable approach is provided for preparing and verifying intermediate-scale genuine entanglement on a 66-qubit superconducting quantum processor.

Extreme heat in Latin America increases road traffic mortality risks, with motorcyclists and bicyclists facing a 27% higher risk on the hottest days. Urban protection measures for vulnerable commuters in cities in the Global South are critical as climate change intensifies heat exposure.

By 2100, 62% of the global population could face severe water scarcity, with inequality amplifying risk. Equitable management offers a path to water security, according to a machine learning forecasting model applied to future development scenarios.

Activation of innate immune responses is subject to versatile regulation. Here the authors show that a conserved LATS family kinase Stk38 limits proinflammatory signalling downstream of TLR9 in macrophages and protects mice from lethal sepsis by MEKK2 ubiquitination and degradation.

Machine learning can be used to identify subtypes of psychiatric disease. Here the authors identified two neurostructural subgroups in schizophrenia, each showing reproducibility and generalizability across different collection locations and illness stages, using the SuStain algorithm.

Density functional theory is widely used throughout the chemical sciences, but suffers from over-emphasis on charge delocalisation. Here, the authors experimentally probe the energies of two states of a diamine cation and show how a self-interaction correction allows for the accurate prediction of both states.

Multimodal large language models (MLLMs) hold promise for a range of medical applications. Here, the authors use MLLMs for 3D brain CT radiology report generation, demonstrating that combining anatomy-aware model fine-tuning with robust evaluation metrics establishes a comprehensive and effective framework.

Exfoliation of layered materials into mono- or few-layers is desirable for both fundamental studies and practical applications. Here, the authors show that Young's equation can be used to predict the optimal cosolvent concentration for the effective exfoliation of graphite and molybdenum disulphide.

Conventional battery electrodes exhibit high tortuosity, impeding ion transport. Here, authors report the use of a temporally shaped ultraviolet femtosecond laser to create an array of high-density through-holes, reducing tortuosity in thick electrodes with low material loss (> 1%) in up to 280 μm-thick LiFePO4 electrodes, improving gravimetric energy density and power capabilities.

Pangenome analyses of 133 wild accessions of the model bryophyte Marchantia polymorpha identify adaptive features and provide insights into the mechanisms of plant adaptation to the terrestrial environment.