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Showing 51–100 of 7421 results
Advanced filters: Author: David F. Gray Clear advanced filters
  • In this study, authors employ fragment-based lead discovery to identify WRN inhibitors. The fragment hits reveal an additional allosteric pocket and uncover a previously uncharacterized structural conformation of the WRN helicase domain with unique orientations of the ATPase domains

    • Rachel L. Palte
    • Mihir Mandal
    • Daniel F. Wyss
    ResearchOpen Access
    Nature Communications
    Volume: 17, P: 1-17
  • The reconstitution of complex biological processes in cell-free systems can support the detailed characterisation of biochemical mechanisms which are difficult to probe in vivo. Here authors present an all-cell-free T7 phage cycle, consisting of cell-sized liposomes encapsulating a cell-free gene expression reaction and a phage receptor at the membrane.

    • Antoine Levrier
    • Paul Soudier
    • Vincent Noireaux
    ResearchOpen Access
    Nature Communications
    Volume: 17, P: 1-12
  • A nine-year transit-timing campaign has measured the extremely low masses and densities of four large planets orbiting the young star V1298 Tau, which are now predicted to contract and form a typical compact super-Earth and sub-Neptune system.

    • John H. Livingston
    • Erik A. Petigura
    • Lorenzo Pino
    ResearchOpen Access
    Nature
    Volume: 649, P: 310-314
  • Here authors identify GluN2D-containing NMDA receptors on interneurons as a specific target for rapid antidepressant action. Blocking GluN2D restores stress-impaired plasticity and mimics the effects of ketamine with fewer side effects.

    • Stefan Vestring
    • Maxime Veleanu
    • Claus Normann
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-26
  • Colloidal particles experience capillary interactions at liquid interfaces, but modifying these interactions is challenging as shape change is required. Here, the authors report polymer particles that change shape with polarised light, and therefore create flow patterns with unusual paths.

    • David Urban
    • Marcel Rey
    • Giovanni Volpe
    ResearchOpen Access
    Nature Communications
    Volume: 17, P: 1-12
  • In patients with advanced cancer, the development of brain metastasis (BM) often signals a worsening prognosis with limited therapeutic options. Here, the authors assemble a large, open-source neuroimaging dataset of BM and perform spatial and morphological analysis which they use to develop a framework for function-sparing brain radiotherapy design.

    • Jorge Barrios
    • Evan Porter
    • Olivier Morin
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-15
  • This study identifies key neurocognitive domains that distinguish patients with schizophrenia from healthy individuals using machine learning. Analyzing data from 1,304 participants, it demonstrates that verbal learning and emotion identification effectively classify conditions, promoting efficient neurocognitive profiling strategies.

    • Robert Y. Chen
    • Tiffany A. Greenwood
    • Debby W. Tsuang
    Research
    Nature Mental Health
    Volume: 4, P: 146-156
  • Respiration enhances cerebrospinal fluid flow through mechanical and autonomic pathways. Inhale length and diaphragm motion influence its displacement and net flow, identifying a modifiable, noninvasive mechanism relevant to brain homeostasis.

    • Seokbeen Lim
    • Petrice M. Cogswell
    • Paul H. Min
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-15
  • Cosgun et al. show that, in B cell leukemia, β-catenin expression is maintained at low levels through glycogen synthase kinase 3B (GSK3β)-mediated phosphorylation. Inhibition of GSK3β results in β-catenin–Ikaros–NuRD complex formation, leading to B-ALL cell death through MYC repression.

    • Kadriye Nehir Cosgun
    • Huda Jumaa
    • Markus Müschen
    ResearchOpen Access
    Nature Cancer
    Volume: 7, P: 150-168
  • The hippocampus can replay long spatial sequences without ripples. When present, ripples cluster in spatially restricted zones as a function of replayed location that remap with barrier changes, implying a tagging role in consolidation.

    • John Widloski
    • David J. Foster
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-14
  • Core excitons are strongly localised excitonic states impacting x-ray absorption and resonant inelastic scattering (RIXS) spectra. Here, the authors demonstrate an application of free electron laser-driven ultrafast RIXS spectroscopy to study previously unclear aspects of core exciton-phonon interactions in graphite.

    • Marco Malvestuto
    • Beatrice Volpato
    • Dino Novko
    ResearchOpen Access
    Nature Communications
    Volume: 17, P: 1-10
  • A deep-learning-based de novo design strategy was developed that enables simultaneous scaffolding of three distinct epitopes derived from respiratory syncytial virus within small single-domain immunogens. Crystallographic analyses confirmed precise presentation of the designed motifs. The multiepitope constructs elicited enhanced cross-reactive and neutralizing antibody responses, demonstrating the potential of generative models for complex multisite protein engineering.

    • Karla M. Castro
    • Joseph L. Watson
    • Bruno E. Correia
    ResearchOpen Access
    Nature Chemical Biology
    P: 1-8
  • A histone ubiquitin-dependent regulatory hub governs stimulus-dependent heterochromatin propagation, with important implications for understanding mechanisms governing rapid changes in the epigenetic landscape in physiology and disease.

    • Bharat Bhatt
    • Yi Wei
    • Shiv I. S. Grewal
    ResearchOpen Access
    Nature
    P: 1-11
  • Understanding deregulation of biological pathways in cancer can provide insight into disease etiology and potential therapies. Here, as part of the PanCancer Analysis of Whole Genomes (PCAWG) consortium, the authors present pathway and network analysis of 2583 whole cancer genomes from 27 tumour types.

    • Matthew A. Reyna
    • David Haan
    • Christian von Mering
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-17
  • BPTF is known to regulate chromatin accessibility and self-renewal in mammary epithelial stem cells. Here, the authors discover that BPTF inhibition delays tumor formation, re-activates ERα expression, increases sensitivity to tamoxifen treatment, and inhibits metastatic development.

    • Michael F. Ciccone
    • Dhivyaa Anandan
    • Camila O. dos Santos
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-18
  • A common mechanism by which cancer cells acquire resistance to chemotherapeutics is through the overexpression of efflux pumps, but platinum anticancer agents that crosslink DNA and interact with proteins are poor efflux pump substrates. Here, the authors design dual warhead drug conjugates by tethering a platinum pharmacophore to the doxorubicin backbone, which exhibit the activity of both parent anticancer compounds and can overcome drug efflux effectively due to covalent binding to intracellular biomolecules.

    • Fang Wang
    • Jonathan Braverman
    • Ömer H. Yilmaz
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-10
  • Little Red Dots (LRDs) are a high-redshift galaxy population with unclear nature. Here, authors show CANUCS-LRD-z8.6, a spectroscopically confirmed LRD, hosting an active galactic nucleus, and its properties provide insights for early black hole and galaxy formation.

    • Roberta Tripodi
    • Nicholas Martis
    • Victoria Strait
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-16
  • VRACs are ubiquitously expressed osmosensitive ion channels assembled from LRRC8A-E subunits. Here, the authors determine the structures of a LRRC8A:D VRAC using cryo-EM and identified that these channels are gated by lipids inside the channel pore.

    • Antony Lurie
    • Christina A. Stephens
    • Stephen G. Brohawn
    ResearchOpen Access
    Nature Communications
    Volume: 17, P: 1-11
  • The authors present DNA-Diffusion, a generative AI framework that designs synthetic regulatory elements with tunable cell-type specificity. Experimental validation demonstrates their ability to reactivate AXIN2 expression, a leukemia-protective gene, in its native genomic context.

    • Lucas Ferreira DaSilva
    • Simon Senan
    • Luca Pinello
    Research
    Nature Genetics
    Volume: 58, P: 180-194
  • Exercise has considerable health benefit, including modulation of the immune system. Here the authors compare the molecular make-up of peripheral blood immune cells at resting state and upon a single bout of two different aerobic exercise modes by proteomics and show that although both exercise modes trigger similar changes, the effect is more pronounced after high intensity interval training.

    • David Walzik
    • Niklas Joisten
    • Philipp Zimmer
    ResearchOpen Access
    Nature Communications
    Volume: 17, P: 1-16
  • The authors report an enhancement of the superconducting onset temperature in nanometer-thin YBa2Cu3O7-δ films grown on substrates with nanofaceted surfaces. They theoretically show that the enhancement is mainly driven by electronic nematicity and unidirectional charge density waves, and further suggest that the nanofacets themselves may promote these effects.

    • Eric Wahlberg
    • Riccardo Arpaia
    • Floriana Lombardi
    ResearchOpen Access
    Nature Communications
    Volume: 17, P: 1-8
  • By performing a CAR-adapted base-editing screen of phosphatidylinositol-3-kinase delta (PI3Kδ, PIK3CD), Bucher et al. identify mutations affecting endogenous PI3K–AKT signaling that enhances CAR T cell antitumor potency.

    • Philip Bucher
    • Nadine Brückner
    • Josef Leibold
    ResearchOpen Access
    Nature Cancer
    P: 1-16
  • Sensory experience transforms endogenously structured cortical networks with diverse and unreliable visual responses into reliable representations. This process is proposed to involve the alignment of feedforward and recurrent networks.

    • Sigrid Trägenap
    • David E. Whitney
    • Matthias Kaschube
    Research
    Nature Neuroscience
    Volume: 28, P: 394-405
  • Viral pathogen load in cancer genomes is estimated through analysis of sequencing data from 2,656 tumors across 35 cancer types using multiple pathogen-detection pipelines, identifying viruses in 382 genomic and 68 transcriptome datasets.

    • Marc Zapatka
    • Ivan Borozan
    • Christian von Mering
    ResearchOpen Access
    Nature Genetics
    Volume: 52, P: 320-330
  • The variability in clinical outcomes of SARS-CoV-2 infection is partly due to deficiencies in production or response to type I interferons (IFN). Here, the authors describe a FIP200-dependent lysosomal degradation pathway, independent of canonical autophagy and type I IFN, that restricts SARS-CoV-2 replication, offering insights into critical COVID-19 pneumonia mechanisms.

    • Lili Hu
    • Renee M. van der Sluis
    • Trine H. Mogensen
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-23
  • Water-vapor interfaces have been studied with many techniques, yet open questions persist about their electronic and molecular structure. Here, the authors demonstrate the application of soft x-ray second harmonic generation to study the water surface by leveraging attosecond pulses at the LCLS and a flat liquid sheet microjet, providing insights on the H-bond structure.

    • David J. Hoffman
    • Shane W. Devlin
    • Jake D. Koralek
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-13
  • Quantifying ecosystem dynamics is critical in the face of rapid environmental change. This study uses airborne eDNA to quantify changes in organism abundances across the tree of life and reveal a regional decline in biodiversity over three decades.

    • Alexis R. Sullivan
    • Edvin Karlsson
    • Per Stenberg
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-12
  • Machine learning can be used to identify subtypes of psychiatric disease. Here the authors identified two neurostructural subgroups in schizophrenia, each showing reproducibility and generalizability across different collection locations and illness stages, using the SuStain algorithm.

    • Yuchao Jiang
    • Cheng Luo
    • Jianfeng Feng
    ResearchOpen Access
    Nature Communications
    Volume: 15, P: 1-15
  • The early genetic evolution of uveal melanoma (UM) remains poorly understood. Here, the authors perform genetic profiling of 1140 primary UMs, including 131 small early-stage tumours, finding that most genetic driver aberrations have occurred by the time small tumours are biopsied; in addition, the15-gene expression profile discriminant score can predict the transition from low- to high-risk tumours.

    • James J. Dollar
    • Christina L. Decatur
    • J. William Harbour
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-12
  • Here, the authors present archaeology of the Namorotukunan site in Kenya’s Turkana Basin that demonstrates adaptive shifts in hominin tool-making behaviour spanning 300,000 years and increasing environmental variability. They contextualize these findings with paleoenvironmental proxies, dating, and geological descriptions.

    • David R. Braun
    • Dan V. Palcu Rolier
    • Susana Carvalho
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-16
  • In this study, the authors develop a flavivirus vaccine strategy by introducing mutations into envelope glycoproteins resulting in structural changes that conceal the ADE-prone fusion loop epitope. They show that the Zika virus-specific construct protects mice against viral challenge and prevents ADE by Dengue virus.

    • Yimeng Wang
    • Andrey Galkin
    • Yuxing Li
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-22