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Showing 1–50 of 5723 results
Advanced filters: Author: Peter Alter Clear advanced filters
  • Analysis combining multiple global tree databases reveals that whether a location is invaded by non-native tree species depends on anthropogenic factors, but the severity of the invasion depends on the native species diversity.

    • Camille S. Delavaux
    • Thomas W. Crowther
    • Daniel S. Maynard
    ResearchOpen Access
    Nature
    Volume: 621, P: 773-781
  • A fully automated methodology based on rubrics capturing a broad range of cognitive and intellectual demands is illustrated using LLMs and tasks, demonstrating a new way to evaluate the capabilities of AI systems and anticipate their performance.

    • Lexin Zhou
    • Lorenzo Pacchiardi
    • José Hernández-Orallo
    ResearchOpen Access
    Nature
    Volume: 652, P: 58-67
  • This Review discusses the latest advances in natural killer cell biology, including insights into population heterogeneity, and examines the roles of these innate lymphocytes in kidney health and disease, as well as their contribution to kidney allograft rejection and its therapeutic implications.

    • Amir Horowitz
    • Peter Heeger
    Reviews
    Nature Reviews Nephrology
    Volume: 22, P: 215-228
  • This paper conducted a priority-setting exercise to identify ten questions that define the future direction of blue carbon science. It highlights key gaps, emerging challenges and opportunities for advancing climate mitigation, ecosystem management and evidence-based policy.

    • Peter I. Macreadie
    • George E. Biddulph
    • William E. N. Austin
    ResearchOpen Access
    Nature Ecology & Evolution
    P: 1-14
  • Bimerons are magnetic solitons that are topologically equivalent to skyrmions in in-plane magnetized systems. This study demonstrates the room-temperature creation of bimerons in Co8Zn8Mn4 via femtosecond laser pulse excitation, revealing dynamic topological control and morphological transitions of these solitons.

    • Kaixin Zhu
    • Filipp N. Rybakov
    • Jianqi Li
    ResearchOpen Access
    Nature Communications
    Volume: 17, P: 1-9
  • Androgen activity in the male embryonic hindbrain prolongs hindbrain differentiation in male individuals and drives sex differences in the incidence and prognosis of posterior fossa type A (PFA) ependymoma, an aggressive childhood brain tumour.

    • Jiao Zhang
    • Winnie Ong
    • Michael D. Taylor
    ResearchOpen Access
    Nature
    P: 1-11
  • Longitudinal metatranscriptomics in a prospective cohort of 1,164 adults hospitalized for COVID-19 reveals that azithromycin offered no apparent anti-inflammatory benefit but enriched the respiratory microbiome with potential pathogens and antimicrobial resistance genes.

    • Abigail Glascock
    • Cole Maguire
    • Charles R. Langelier
    ResearchOpen Access
    Nature Microbiology
    P: 1-13
  • Target-directed microRNA degradation is driven by the atypical ZSWIM8–CUL3 E3 ubiquitin ligase that uses a two-RNA-factor authentication mechanism to specifically recognize AGO–miRNA–trigger RNA complexes and polyubiquitylate AGO.

    • Jakob Farnung
    • Elena Slobodyanyuk
    • David P. Bartel
    ResearchOpen Access
    Nature
    P: 1-10
  • DNA methylation heterogeneity and dynamics hinder distinguishing early pathological changes from normal variation. Here, the authors identify stable sites whose disruption is linked to blood cancers, aging, and cardiovascular risk.

    • Salman Basrai
    • Ido Nofech-Mozes
    • Sagi Abelson
    ResearchOpen Access
    Nature Communications
    Volume: 17, P: 1-13
  • GATA2 regulatory mutations are associated with hereditary congenital facial paresis in humans. A genetically engineered mouse model recapitulates the human phenotype, showing altered neuron-specific Gata2 expression and a bias in formation of inner-ear efferent neurons over facial branchial motor neurons.

    • Alan P. Tenney
    • Silvio Alessandro Di Gioia
    • Elizabeth C. Engle
    ResearchOpen Access
    Nature Genetics
    Volume: 55, P: 1149-1163
  • Exhaustion is a functional state that hampers anti-cancer and antiviral CD8 T cell activity, and is preceded by a stem-like state, maintained by the transcription factor TCF1. Here authors develop mouse models that allow a precise understanding of the developmental trajectory between the stem-cell-like and exhausted states of CD8 T cells and find that while constitutive overexpression of TCF1 expands the stem-like T cell pool, TCF1 expression specifically in already exhausted cells is unable to promote dedifferentiation.

    • Maria N. de Menezes
    • Amanda X. Y. Chen
    • Ian A. Parish
    ResearchOpen Access
    Nature Communications
    Volume: 17, P: 1-15
  • The excitatory neuron diversity and specialized connectivity of complex, multilayered mammalian neocortex are driven by mammalian-specific cis-regulatory elements bound by ZBTB18, deletion of which disrupts gene expression and results in projection patterns resembling those of non-mammalian brains.

    • Zhuo Li
    • Navjot Kaur
    • Nenad Sestan
    ResearchOpen Access
    Nature
    P: 1-11
  • Affinity-proteomics platforms often yield poorly correlated measurements. Here, the authors show that protein-altering variants drive a portion of inter-platform inconsistency and that accounting for genetic variants can improve concordance of protein measures and phenotypic associations across ancestries.

    • Jayna C. Nicholas
    • Daniel H. Katz
    • Laura M. Raffield
    ResearchOpen Access
    Nature Communications
    Volume: 17, P: 1-21
  • Data from over 700,000 individuals reveal the identity of 83 sequence variants that affect human height, implicating new candidate genes and pathways as being involved in growth.

    • Eirini Marouli
    • Mariaelisa Graff
    • Guillaume Lettre
    Research
    Nature
    Volume: 542, P: 186-190
  • How microglia regulate adult hippocampal neurogenesis and cognitive and affective behavior remains poorly understood. Here, the authors show that TGF-β-deficient microglia increase adult neurogenesis in the subgranular zone and alter anxiety-like behavior in mice.

    • Kierra Ware
    • Joshua Peter
    • Yu Luo
    ResearchOpen Access
    Nature Communications
    Volume: 17, P: 1-24
    • John H. Noseworthy
    • Peter Kirkpatrick
    Comments & Opinion
    Nature Reviews Drug Discovery
    Volume: 4, P: 101-102
  • The study shows how ship traffic in the Baltic Sea modifies seafloor morphology and disrupts water layers, thereby increasing the mixing of oxygen, nutrients and greenhouse gases, suggesting broad impacts on Baltic marine ecosystems.

    • Jacob Geersen
    • Peter Feldens
    • Jens Schneider von Deimling
    ResearchOpen Access
    Nature Communications
    Volume: 17, P: 1-14
  • High-quality chemical safety information is essential, but information is often fragmented, inconsistent and incomplete. As a result, users face unrealistic expectations in applying risk-based principles. This article highlights persistent challenges and urges stakeholders to improve access, accuracy and application of chemical safety data.

    • Peter A. Reinhardt
    • Samuella B. Sigmann
    • Adelina Voutchkova-Kostal
    Reviews
    Nature Reviews Chemistry
    P: 1-17
  • The relative contribution of lipid catabolism on fasting-induced longevity was unknown. Authors showed lifespan extension from fasting depend on silencing lipid catabolism upon nutrient replenishment through phosphorylation of NHR-49 by KIN-19.

    • Lexus Tatge
    • Juhee Kim
    • Peter M. Douglas
    ResearchOpen Access
    Nature Communications
    Volume: 17, P: 1-22
  • The flow of energy in Earth's primary light harvesters — photosynthetic pigment–protein complexes — needs to be heavily regulated, as the sun's energy supply can vary over many orders of magnitude. Observing hundreds of individual light-harvesting complexes has now provided important insights into the machinery that regulates this process.

    • Peter J. Walla
    News & Views
    Nature Chemistry
    Volume: 9, P: 728-730
  • Mitochondrial dysfunction in dopaminergic neurons is a pathological hallmark of Parkinson’s disease. Here, the authors find a conserved mechanism by which a single transcription factor controls mitochondrial health in dopaminergic neurons during the aging process.

    • Federico Miozzo
    • Eva P. Valencia-Alarcón
    • Emi Nagoshi
    ResearchOpen Access
    Nature Communications
    Volume: 13, P: 1-18
  • Anthropogenic nitrogen enrichment reduces symbiotic nitrogen fixation, but environmental factors alone cannot explain this response. This meta-analysis shows that integrating both environmental factors and plant performance traits improves the predictive accuracy of symbiotic nitrogen fixation responses by 42.7%.

    • Yanzhong Yao
    • Bingbing Han
    • Zhaolei Li
    ResearchOpen Access
    Nature Communications
    Volume: 17, P: 1-11
  • The International Space Station is a unique habitat for humans and microbes. Here, Mora et al. analyze microbial communities from several areas aboard, finding similarities with those of ground-based indoor environments, as well as adaptations towards biofilm formation but not necessarily relevant to human health.

    • Maximilian Mora
    • Lisa Wink
    • Christine Moissl-Eichinger
    ResearchOpen Access
    Nature Communications
    Volume: 10, P: 1-18
  • This study utilized a longitudinal cohort of adolescents to identify distinct brain signatures linked to ADHD symptom trajectories, revealing that specific cortical and subcortical changes correlate with symptom persistence, remission and emergence, enhancing predictive capabilities for ADHD outcomes.

    • Wenjie Hou
    • Daqian Zhu
    • Qiang Luo
    Research
    Nature Mental Health
    Volume: 4, P: 263-278
  • This study reveals that Arabidopsis reassimilates formate produced during photorespiration via the cytosolic folate cycle to fuel DNA methylation, forming a metabolic–epigenetic bridge that links elevated CO2 to epigenetic regulation.

    • Valentin Hankofer
    • Andrea Ghirardo
    • Martin Groth
    ResearchOpen Access
    Nature Plants
    Volume: 12, P: 653-664
  • Here the authors compare genetic testing strategies in rare movement disorders, improve diagnostic yield with genome analysis, and establish CD99L2 as an X-linked spastic ataxia gene, showing that CD99L2–CAPN1 signaling disruption likely drives neurodegeneration.

    • Benita Menden
    • Rana D. Incebacak Eltemur
    • Tobias B. Haack
    ResearchOpen Access
    Nature Communications
    Volume: 17, P: 1-21
  • This study shows that Epac2, a cAMP-activated Rap-GEF, acts downstream of D1/D5 dopamine receptor signaling to regulate dendritic spines and synaptic transmission. The authors also show that rare mutations of the EPAC2 gene that are associated with autism cause defects in Epac2-mediated spine remodeling.

    • Kevin M Woolfrey
    • Deepak P Srivastava
    • Peter Penzes
    Research
    Nature Neuroscience
    Volume: 12, P: 1275-1284
  • The flagship paper of the ICGC/TCGA Pan-Cancer Analysis of Whole Genomes Consortium describes the generation of the integrative analyses of 2,658 cancer whole genomes and their matching normal tissues across 38 tumour types, the structures for international data sharing and standardized analyses, and the main scientific findings from across the consortium studies.

    • Lauri A. Aaltonen
    • Federico Abascal
    • Christian von Mering
    ResearchOpen Access
    Nature
    Volume: 578, P: 82-93
  • Parity induces an accumulation of CD8+ T cells, including cells with a tissue-resident-memory-like phenotype within human normal breast tissue, offering long-term protection against triple-negative breast cancer.

    • Balaji Virassamy
    • Franco Caramia
    • Sherene Loi
    ResearchOpen Access
    Nature
    Volume: 649, P: 449-459
  • Understanding deregulation of biological pathways in cancer can provide insight into disease etiology and potential therapies. Here, as part of the PanCancer Analysis of Whole Genomes (PCAWG) consortium, the authors present pathway and network analysis of 2583 whole cancer genomes from 27 tumour types.

    • Matthew A. Reyna
    • David Haan
    • Christian von Mering
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-17
  • Analysis of cancer genome sequencing data has enabled the discovery of driver mutations. Here, as part of the ICGC/TCGA Pan-Cancer Analysis of Whole Genomes (PCAWG) Consortium the authors present DriverPower, a software package that identifies coding and non-coding driver mutations within cancer whole genomes via consideration of mutational burden and functional impact evidence.

    • Shimin Shuai
    • Federico Abascal
    • Christian von Mering
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-12
  • Even though the application of co-solvents in glycosylation protocols is well-established, the understanding of their impact on the glycosylation mechanism as well as the reaction intermediates formed upon their addition, remains incomplete. Here, the authors report the application of relaxation and exchange NMR techniques to establish that acetonitrile and tetrahydrofuran form covalent glycosyl-nitrilium and glycosyloxonium ions, respectively.

    • Frank F. J. de Kleijne
    • Floor Ter Braak
    • Thomas J. Boltje
    ResearchOpen Access
    Nature Communications
    Volume: 17, P: 1-11
  • David Whitcomb, Bernie Devlin and colleagues report the results of a genome-wide association study of pancreatitis. They identify common variants at two loci associated with risk of this disease, including one on the X chromosome that shows strong evidence of interaction with alcohol consumption.

    • David C Whitcomb
    • Jessica LaRusch
    • Bernie Devlin
    Research
    Nature Genetics
    Volume: 44, P: 1349-1354
  • Peter 't Hoen, Lude Franke, Bastiaan Heijmans and colleagues present a combined analysis of methylome and transcriptome data from a large collection of whole-blood samples to infer the downstream effects of disease-associated variants. They identify a large number of trait-associated SNPs influencing methylation of CpG sites in trans, providing insights into the downstream functional effects of many disease-associated variants.

    • Marc Jan Bonder
    • René Luijk
    • Bastiaan T Heijmans
    Research
    Nature Genetics
    Volume: 49, P: 131-138