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Showing 1–50 of 3225 results
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  • Proteomic data from natural isolates of Saccharomyces cerevisiae provide insight into how these cells tolerate aneuploidy (an imbalance in the number of chromosomes), and reveal differences between lab-engineered aneuploids and diverse natural yeasts.

    • Julia Muenzner
    • Pauline Trébulle
    • Markus Ralser
    ResearchOpen Access
    Nature
    Volume: 630, P: 149-157
  • New methods for targeted covalent protein modification at low reactivity aspartates and glutamates are of high interest. Here, the authors report a technique inspired by the HaloTag technology, which employs a covalent conjugation reaction between ligands with a reactive chloroalkane linker and a specific aspartic acid, and use it to covalently modify lipoprotein chaperone PDEδ at a binding site glutamic acid.

    • Ruirui Zhang
    • Jie Liu
    • Herbert Waldmann
    ResearchOpen Access
    Nature Communications
    Volume: 17, P: 1-18
  • Estimating rates of pertussis infections is challenging due to the large proportion of asymptomatic infections and lack of a reliable serological correlate of protection. Here, the authors develop a transmission model to evaluate the reliability of pertussis serosurveys for quantifying recent infections.

    • Matthieu Domenech de Cellès
    • Anabelle Wong
    • Pejman Rohani
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-13
  • In targeted protein degradation, a degrader molecule brings a neosubstrate protein proximal to a hijacked E3 ligase for its ubiquitination. Here, pseudo-natural products derived from (−)-myrtanol—iDegs—are identified to inhibit and induce degradation of the immunomodulatory enzyme indoleamine-2,3-dioxygenase 1 (IDO1) by a distinct mechanism. iDegs prime apo-IDO1 ubiquitination and subsequent degradation using its native proteolytic pathway.

    • Elisabeth Hennes
    • Belén Lucas
    • Herbert Waldmann
    ResearchOpen Access
    Nature Chemistry
    P: 1-12
  • Spatial transcriptomics (ST) technologies link tissue morphology with gene expression, but remain expensive to use; furthermore, models that predict ST data from histopathology images possess considerable limitations. Here, the authors develop STimage, a deep learning probabilistic framework for ST prediction from histopathology images while prioritising robustness and interpretability.

    • Xiao Tan
    • Onkar Mulay
    • Quan Nguyen
    ResearchOpen Access
    Nature Communications
    P: 1-17
  • Induction of CD11b-positive regulatory B cells and low expression of CD40 in melanoma cells have been associated with resistance to agonist CD40 (aCD40) and immune checkpoint blockade (ICB). Here the authors show that the addition of RAS/MEK/PI3K inhibitors to aCD40 abrogates these effects and reverses ICB resistance in preclinical melanoma models.

    • Chi Yan
    • Weifeng Luo
    • Ann Richmond
    ResearchOpen Access
    Nature Communications
    Volume: 17, P: 1-23
  • The 4D Nucleome Project demonstrates the use of genomic assays and computational methods to measure genome folding and then predict genomic structure from DNA sequence, facilitating the discovery of potential effects of genetic variants, including variants associated with disease, on genome structure and function.

    • Job Dekker
    • Betul Akgol Oksuz
    • Feng Yue
    ResearchOpen Access
    Nature
    Volume: 649, P: 759-776
  • The International Brain Laboratory presents a brain-wide electrophysiological map obtained from pooling data from 12 laboratories that performed the same standardized perceptual decision-making task in mice.

    • Leenoy Meshulam
    • Dora Angelaki
    • Ilana B. Witten
    ResearchOpen Access
    Nature
    Volume: 645, P: 177-191
  • Current single-cell RNA sequencing methods struggle to comprehensively profile transcriptomes, with many lowly expressed transcripts remaining undetected. Here authors present a workflow for enhancing the detection of both transcripts and regions of interest in combination with a standard transcriptome profile.

    • Giulia Moro
    • Izaskun Mallona
    • Konrad Basler
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-22
  • Mapping of the neutrophil compartment using single-cell transcriptional data from multiple physiological and patological states reveals its organizational architecture and how cell state dynamics and trajectories vary during health, inflammation and cancer.

    • Daniela Cerezo-Wallis
    • Andrea Rubio-Ponce
    • Iván Ballesteros
    ResearchOpen Access
    Nature
    Volume: 649, P: 1003-1012
  • Bruijns et al. present a modeling tool that enables the tracking of learning dynamics across subjects to reveal how behaviors emerge and adapt. Applying the tool to a decision-making task in mice uncovers similarities and differences across individuals.

    • Sebastian A. Bruijns
    • Petrina Y. P. Lau
    • Peter Dayan
    ResearchOpen Access
    Nature Neuroscience
    Volume: 29, P: 186-194
  • Stronger links between researchers who work on Earth’s and other planets’ atmospheres, and between the experimental, modelling and observational communities, will help to interpret the astronomical data now at our fingertips.

    • Frank A. F. Winiberg
    • Laura Kreidberg
    • Paul I. Palmer
    Comments & Opinion
    Nature
    Volume: 646, P: 1057-1059
  • Noradrenergic circuits support and balance aggressive behavioural states in predatory nematodes, distinguish predatory from non-predatory nematode species and are associated with the evolution of complex behavioural traits.

    • Güniz Göze Eren
    • Leonard Böger
    • James W. Lightfoot
    ResearchOpen Access
    Nature
    P: 1-10
  • A martensitic alloy with a tensile strength exceeding 3 GPa and a fracture elongation of 5.13% is developed. These mechanical properties arise from interface complexes interacting with dense dislocation networks, which is a mechanism shown to be applicable to other compositions.

    • Rong Lv
    • Jia Li
    • Zhaoping Lu
    Research
    Nature Materials
    P: 1-10
  • In this study, the authors reveal two hippocampal neuron subpopulations that encode time or distance via opposing ramping dynamics. These populations form parallel circuits controlled by distinct interneurons, PV for initiation and SST for maintenance of encoding.

    • Raphael Heldman
    • Dongyan Pang
    • Yingxue Wang
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-21
  • In social settings, people need to establish how much they contribute to shared outcomes. Here, the authors show that people strategically alter their actions to establish their level of control and identify neural activity underlying this process.

    • Lisa Spiering
    • Hailey A. Trier
    • Jacqueline Scholl
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-21
  • This paper develops the Risk Analysis – Perception framework to analyze a national survey and public health metrics for public perceptions of extreme heat risk in the US, finding substantial misalignments between assessed and perceived risk.

    • Jennifer R. Marlon
    • Nicolas Begotka
    • Anthony Leiserowitz
    ResearchOpen Access
    Nature Communications
    Volume: 17, P: 1-10
  • SimuFLUX, a user-friendly simulator, accepts commercial MINFLUX microscope configuration files and implements detailed models of point spread functions, fluorophore dynamics, and optical mechanics to optimize and assess feasibility of MINFLUX experiments.

    • Zach Marin
    • Jonas Ries
    ResearchOpen Access
    Nature Communications
    Volume: 17, P: 1-8
  • In daily life, light exposure influences cognitive performance in 58 UK adults: brighter, more stable days are linked to better vigilance, memory, and visual search, while recent bright light reduces sleepiness and reaction times.

    • Altug Didikoglu
    • Tom Woelders
    • Robert J. Lucas
    ResearchOpen Access
    Communications Psychology
    Volume: 4, P: 1-12
  • Plant traits drive ecosystem dynamics yet are challenging to map globally due to sparse measurements. Here, the authors combine crowdsourced biodiversity observations with Earth observation data to accurately map 31 plant traits at 1 km2 resolution.

    • Daniel Lusk
    • Sophie Wolf
    • Teja Kattenborn
    ResearchOpen Access
    Nature Communications
    Volume: 17, P: 1-17
  • An autonomous laboratory, the A-Lab, is presented that combines computations, literature data, machine learning and active learning, which discovered and synthesized 41 novel compounds from a set of 58 targets after 17 days of operation.

    • Nathan J. Szymanski
    • Bernardus Rendy
    • Gerbrand Ceder
    ResearchOpen Access
    Nature
    Volume: 624, P: 86-91
  • Mendelian genetics posits equal transmission of alleles, but selfish alleles can bias the transmission of large genomic regions or entire chromosomes. This study reveals the evolution of large amplicons as a distinct genetic feature of chromosomes with selfish alleles.

    • Callie M. Swanepoel
    • Gaojianyong Wang
    • Jacob L. Mueller
    ResearchOpen Access
    Nature Communications
    Volume: 17, P: 1-13
  • Here, the authors present archaeology of the Namorotukunan site in Kenya’s Turkana Basin that demonstrates adaptive shifts in hominin tool-making behaviour spanning 300,000 years and increasing environmental variability. They contextualize these findings with paleoenvironmental proxies, dating, and geological descriptions.

    • David R. Braun
    • Dan V. Palcu Rolier
    • Susana Carvalho
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-16
  • Myotonic dystrophy type 1 affects both muscle and neuronal function, but its synaptic pathology is poorly understood. Here, the authors show that upregulation of FasII (NCAM1) in both pre- and postsynaptic cells synergistically drives neuropathological and behavioral DM1 phenotypes, which can be rescued by FasII knockdown or specific isoform modulation.

    • Alex Chun Koon
    • Ka Yee Winnie Yeung
    • Ho Yin Edwin Chan
    ResearchOpen Access
    Nature Communications
    Volume: 17, P: 1-17
  • This research quantifies hospital admissions in Shanghai for mental and behavioral disorders linked to humid heat, projecting a 68.2% increase by the 2090s under high greenhouse gas emissions and emphasizing the importance of mitigation strategies to reduce future morbidity burdens.

    • Chen Liang
    • Jiacan Yuan
    • Ragnhild Brandlistuen
    Research
    Nature Mental Health
    Volume: 3, P: 1532-1544
  • A preinfusion circulatory inflammation biomarker-based signature predicts the likelihood of treatment failure in patients with non-Hodgkin lymphoma who were treated with CAR-T cell therapy, with an inflammatory cluster assignment being prognostic of clinical response and survival outcomes.

    • Sandeep S. Raj
    • Teng Fei
    • Roni Shouval
    ResearchOpen Access
    Nature Medicine
    Volume: 31, P: 1183-1194
  • u-Segment3D is a universal framework that translates and enhances 2D instance segmentations to a 3D consensus instance segmentation without training data. It performs well across diverse datasets, including cells with complex morphologies.

    • Felix Y. Zhou
    • Zach Marin
    • Gaudenz Danuser
    ResearchOpen Access
    Nature Methods
    Volume: 22, P: 2386-2399
  • Synaptic vesicle fusion is essential for neuronal communication, yet its nanoscale sequence has not been directly confirmed. Here, the authors use timed in situ cryo-electron tomography to visualize the full fusion process and its link to vesicle resupply.

    • Jana Kroll
    • Uljana Kravčenko
    • Christian Rosenmund
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-17
  • High-depth sequencing of non-cancerous tissue from patients with metastatic cancer reveals single-base mutational signatures of alcohol, smoking and cancer treatments, and reveals how exogenous factors, including cancer therapies, affect somatic cell evolution.

    • Oriol Pich
    • Sophia Ward
    • Nicholas McGranahan
    ResearchOpen Access
    Nature
    P: 1-11
  • Reproduction in numerous marine organisms is timed to specific moon phases, but the mechanisms for sensing moon phases are incompletely understood. Here the authors report that an ancient, light-sensitive protein L-Cryptochrome in a marine bristle worm can discriminate between sun- and moonlight, enabling the animals to properly decode moon phases.

    • Birgit Poehn
    • Shruthi Krishnan
    • Kristin Tessmar-Raible
    ResearchOpen Access
    Nature Communications
    Volume: 13, P: 1-18
  • Hepatocyte organoids derived directly from human tissue enable long-term hepatocyte expansion and can be combined with portal mesenchyme and cholangiocyte organoids to form a donor-specific periportal liver assembloid system.

    • Lei Yuan
    • Sagarika Dawka
    • Meritxell Huch
    ResearchOpen Access
    Nature
    P: 1-12
  • Analyses of ancient human DNA show that cultural and political transformations in Central Europe during the second half of the first millennium ce were associated with movements of Slavic populations into Germany, Poland and Croatia.

    • Joscha Gretzinger
    • Felix Biermann
    • Johannes Krause
    ResearchOpen Access
    Nature
    Volume: 646, P: 384-393
  • Interwoven magnetic and non-magnetic layers in TbTi3Bi4 overcome kagome frustration, producing coupled elliptical-spiral magnetic and spin-density-wave orders and a very large anomalous Hall effect driven by strong electron–magnetic field interactions.

    • Erjian Cheng
    • Kaipu Wang
    • Claudia Felser
    ResearchOpen Access
    Nature Materials
    P: 1-8