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Showing 1–50 of 6480 results
Advanced filters: Author: G. L. Zhang Clear advanced filters
  • KRAS is an oncogene that switches between a GDP-bound inactive state and a GTP-bound active state. Recently developed KRAS G12C inhibitors are specific to the GDP-bound inactive state. Here, the authors develop a class of covalent KRAS G12C inhibitors capable of targeting both states for the treatment of KRAS-driven cancer.

    • Matthew L. Condakes
    • Zhuo Zhang
    • Michelle L. Stewart
    ResearchOpen Access
    Nature Communications
    P: 1-15
  • Identifying jets originating from heavy quarks plays a fundamental role in hadronic collider experiments. In this work, the ATLAS Collaboration describes and tests a transformer-based neural network architecture for jet flavour tagging based on low-level input and physics-inspired constraints.

    • G. Aad
    • E. Aakvaag
    • L. Zwalinski
    ResearchOpen Access
    Nature Communications
    Volume: 17, P: 1-22
  • Self-oscillators are critical in various natural and engineered systems, as they enable complex collective behaviors through interactions among individual units. This study demonstrates that populations of Quincke colloids-self-oscillators whose back-and-forth motion defines both a phase and a nematic oscillation axis-can achieve a form of collective order, termed synchronematic order, characterized by hydrodynamic interactions that synchronize their oscillation phases and align their orientations.

    • Sergi G. Leyva
    • Zhengyan Zhang
    • Kyle J. M. Bishop
    ResearchOpen Access
    Nature Communications
    P: 1-12
  • Here the authors perturb genes linked to schizophrenia risk in human neurons. They find that single perturbations share common downstream effects on gene networks, while joint perturbations result in downstream effects being saturated.

    • PJ Michael Deans
    • Kayla G. Retallick-Townsley
    • Kristen J. Brennand
    ResearchOpen Access
    Nature Communications
    P: 1-23
  • Large-effect variants in autism remain elusive. Here, the authors use long-read sequencing to assemble phased genomes for 189 individuals, identifying pathogenic variants in TBL1XR1, MECP2, and SYNGAP1, plus nine candidate structural variants missed by short-read methods.

    • Yang Sui
    • Jiadong Lin
    • Evan E. Eichler
    ResearchOpen Access
    Nature Communications
    P: 1-16
  • Biodegradable enzymatic microbubble robots self-propel in urea, are magnetically or chemotactically guided, provide ultrasound imaging and enhance intratumoural drug delivery with focused ultrasound.

    • Songsong Tang
    • Hong Han
    • Wei Gao
    Research
    Nature Nanotechnology
    P: 1-10
  • Non-invasive strategies to detect and track activated myeloid cells will facilitate disease diagnosis and monitoring in patients affected by neuroinflammatory disorders. Here, the authors present 18F-FMD, a dendrimer-based PET tracer that detects and monitors activated myeloid cells at different stages (presymptomatic and symptomatic) of Experimental Autoimmune Encephalomyelitis (EAE) in mice and in response to disease-modifying therapies.

    • Renesmee C. Kuo
    • Mackenzie L. Carlson
    • Michelle L. James
    ResearchOpen Access
    Nature Communications
    Volume: 17, P: 1-14
  • Nagahata, Kato and Yamada et al. provide cryo-electron microscopy structures of four phylogenetically diverse RNA-guided nucleases—HfmIscB, TbaIscB, YnpsCas9 and NbaCas9—each in complex with its guide RNA and target DNA, providing insights into CRISPR–Cas9 evolution.

    • Naoto Nagahata
    • Kazuki Kato
    • Hiroshi Nishimasu
    Research
    Nature Structural & Molecular Biology
    P: 1-14
  • The tolerogenic activity of type 1 conventional dendritic cells (cDC1s) is determined by EPOR, which is preferentially expressed in cDC1s and induces antigen-specific FOXP3-expressing regulatory T cells.

    • Xiangyue Zhang
    • Christopher S. McGinnis
    • Edgar G. Engleman
    Research
    Nature
    P: 1-11
  • A cortical premotor network in HVC, once initiated, can sustain and regulate the sequential production of zebra finch song syllables without major extrinsic inputs.

    • Massimo Trusel
    • Junfeng Zuo
    • Todd F. Roberts
    ResearchOpen Access
    Nature
    P: 1-10
  • The underlying molecular mechanisms of neuroinflammation and axonal damage in progressive multiple sclerosis remains unclear. Here, authors show proteomics results of human progressive multiple sclerosis brain tissues and found extracellular matrix proteins (annexin, S100, AHNAK families) were enriched in lesions and white matter.

    • Henry Wang
    • Niall M. Pollock
    • Olivier Julien
    ResearchOpen Access
    Nature Communications
    P: 1-16
  • Understanding collective behaviour is an important aspect of managing the pandemic response. Here the authors show in a large global study that participants that reported identifying more strongly with their nation reported greater engagement in public health behaviours and support for public health policies in the context of the pandemic.

    • Jay J. Van Bavel
    • Aleksandra Cichocka
    • Paulo S. Boggio
    ResearchOpen Access
    Nature Communications
    Volume: 13, P: 1-14
  • The CMS Collaboration reports the measurement of the spin, parity, and charge conjugation properties of all-charm tetraquarks, exotic fleeting particles formed in proton–proton collisions at the Large Hadron Collider.

    • A. Hayrapetyan
    • V. Makarenko
    • A. Snigirev
    ResearchOpen Access
    Nature
    Volume: 648, P: 58-63
  • The 4D Nucleome Project demonstrates the use of genomic assays and computational methods to measure genome folding and then predict genomic structure from DNA sequence, facilitating the discovery of potential effects of genetic variants, including variants associated with disease, on genome structure and function.

    • Job Dekker
    • Betul Akgol Oksuz
    • Feng Yue
    ResearchOpen Access
    Nature
    Volume: 649, P: 759-776
  • Wearable silent speech systems hold potential for restoring communication in patients suffering from speech impairments. Tang et al. report an AI-driven silent speech system for dysarthria patients, which enables zero-time-delay expression and context-aware emotion decoding-based sentence expansion.

    • Chenyu Tang
    • Shuo Gao
    • Luigi G. Occhipinti
    ResearchOpen Access
    Nature Communications
    Volume: 17, P: 1-12
  • The distinct architecture of the Escherichia coli membrane transporter LetA mediates lipid trafficking across the bacterial envelope in partnership with the tunnel-like complex LetB.

    • Cristina C. Santarossa
    • Yupeng Li
    • Gira Bhabha
    ResearchOpen Access
    Nature
    P: 1-10
  • Analysis combining multiple global tree databases reveals that whether a location is invaded by non-native tree species depends on anthropogenic factors, but the severity of the invasion depends on the native species diversity.

    • Camille S. Delavaux
    • Thomas W. Crowther
    • Daniel S. Maynard
    ResearchOpen Access
    Nature
    Volume: 621, P: 773-781
  • Kinematic measurements of the Perseus galaxy cluster reveal two drivers of gas motions: a small-scale driver in the inner core associated with black-hole feedback and a large-scale driver in the outer core powered by mergers.

    • Marc Audard
    • Hisamitsu Awaki
    • Elena Bellomi
    Research
    Nature
    P: 1-5
  • ADGRL4 is a cancer-implicated adhesion GPCR whose ability to couple to G proteins had been unclear. Here, authors show that ADGRL4 weakly engages Gq and determine its 3.1 Å active-state structure, revealing its mechanism of activation.

    • Qingchao Chen
    • Anastasiia Gusach
    • David M. Favara
    ResearchOpen Access
    Nature Communications
    Volume: 17, P: 1-14
  • In vitro propagation of the pathogenic bacterium Coxiella burnetii, the causative agent of Q fever, leads to attenuated virulence and lipopolysaccharide (LPS) truncation. Here, Long et al. show that a strain considered to be avirulent (NMII) can be recovered from infected animals, and these isolates display increased virulence and an elongated LPS due to reversion of a 3-bp mutation in a gene.

    • Carrie M. Long
    • Paul A. Beare
    • Robert A. Heinzen
    ResearchOpen Access
    Nature Communications
    Volume: 15, P: 1-8
  • A protein biomarker, the NOTCH3 extracellular domain, identifies individuals with idiopathic pulmonary hypertension, correlates with disease progression, improves mortality risk prediction and provides a readily implementable, noninvasive blood test for this disease.

    • Moises Hernandez
    • Nolan M. Winicki
    • Patricia A. Thistlethwaite
    ResearchOpen Access
    Nature Medicine
    Volume: 32, P: 306-317
  • Here the authors perform longitudinal sampling of lymphoid organs along with fate mapping and matched single-cell RNA sequencing and TCR sequencing to define the developmental dynamics of follicular regulatory T (TFR) cells. They find that TFR cells undergo clonal expansion and progressive differentiation in a process that requires follicular helper T cells.

    • Jeong-Mi Lee
    • Paulo Lisboa Raeder
    • Peter T. Sage
    ResearchOpen Access
    Nature Immunology
    Volume: 27, P: 336-347
  • TCR-engineered T cells have shown limited efficacy in part due to the absence of co-stimulation leading to limited accumulation in solid tumors. The authors here show engineering the CD8β coreceptor with an intracellular CD28 domain enhances cytokine production, persistence, and tumor control in vivo independent of tumor-associated co-stimulatory ligand encounter.

    • Shihong Zhang
    • Tzu-Hao Tang
    • Aude G. Chapuis
    ResearchOpen Access
    Nature Communications
    Volume: 17, P: 1-21
  • Guest adsorption in soft porous crystals induces host deformation and alters rigidity, yet the role of elastic heterogeneity in adsorption kinetics is not well understood. Using coarse-grained lattice model and dynamic Monte Carlo simulations, this study demonstrates that elastic heterogeneity governs adsorption kinetics, leading to anomalous dynamic scaling, offering a mechanistic foundation for engineering responsive materials with mechanically regulated cooperative molecular transport.

    • Kota Mitsumoto
    • Kyohei Takae
    ResearchOpen Access
    Communications Physics
    Volume: 9, P: 1-10
  • When senescent cells accumulate during adulthood they negatively influence lifespan and promote age-dependent changes in several organs; clearance of these cells delayed tumorigenesis in mice and attenuated age-related deterioration of several organs without overt side effects, suggesting that the therapeutic removal of senescent cells may be able to extend healthy lifespan.

    • Darren J. Baker
    • Bennett G. Childs
    • Jan M. van Deursen
    Research
    Nature
    Volume: 530, P: 184-189
  • The perceived toxicity of organometallic reagents has limited their use in living systems. Now it has been shown that balancing flexible chelation with biocompatible ligands without precluding chemical reactivity enables organonickel-mediated S-arylation inside cells. This reaction enables deep chemical surveys of reactive proteins and covalent tracking of intracellular viral and bacterial pathogens.

    • Xiaping Fu
    • Weibing Liu
    • Benjamin G. Davis
    ResearchOpen Access
    Nature Chemistry
    P: 1-16
  • Extrachromosomal circular DNAs (ecDNAs) are prevalent in human cancers and are thought to drive tumor evolution and drug resistance by amplifying oncogenes. Here, authors develop ec3D to reconstruct three-dimensional ecDNA structures, revealing how their spatial organization rewires regulatory circuits.

    • Biswanath Chowdhury
    • Kaiyuan Zhu
    • Vineet Bafna
    ResearchOpen Access
    Nature Communications
    Volume: 17, P: 1-20
  • Breastfeeding is inversely associated with cardiometabolic disease; however, the metabolic pathways underlying these associations remain largely unknown. Here, the authors show plasma metabolite profiles in mid-life associated with breastfeeding duration, which is also linked to CVD and T2D risk.

    • Anna Birukov
    • Nan Lin
    • Naoko Sasamoto
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-12
  • Genomic analyses applied to 14 childhood- and adult-onset psychiatric disorders identifies five underlying genomic factors that explain the majority of the genetic variance of the individual disorders.

    • Andrew D. Grotzinger
    • Josefin Werme
    • Jordan W. Smoller
    ResearchOpen Access
    Nature
    Volume: 649, P: 406-415
  • Glioblastoma is characterised by high levels of intratumoural heterogeneity and plasticity, hindering treatment. Here, the authors develop an analytical framework, scFOCAL, to predict the sensitivity of glioblastoma cell subpopulations to therapies based on reversal of disease transcriptional signatures to identify synergistic therapeutic combinations.

    • Robert K. Suter
    • Anna M. Jermakowicz
    • Nagi G. Ayad
    ResearchOpen Access
    Nature Communications
    Volume: 17, P: 1-18
  • In mice, a SPOCD1–TPR-dependent ‘nowhere-to-hide’ mechanism is required for complete non-stochastic piRNA-directed LINE1 DNA methylation by preventing transposons from escaping surveillance within heterochromatin.

    • Tamoghna Chowdhury
    • Shelagh Boyle
    • Dónal O’Carroll
    Research
    Nature
    P: 1-7
  • Mapping of the neutrophil compartment using single-cell transcriptional data from multiple physiological and patological states reveals its organizational architecture and how cell state dynamics and trajectories vary during health, inflammation and cancer.

    • Daniela Cerezo-Wallis
    • Andrea Rubio-Ponce
    • Iván Ballesteros
    ResearchOpen Access
    Nature
    Volume: 649, P: 1003-1012
  • Shroom3 genetic variants increase Shroom3 levels and promote kidney fibrosis but reduce proteinuria, complicating Shroom3 targeting for precision medicine. Here, the authors show increased fibrosis mediated by Shroom3–Rock signaling and blocking this interaction genetically or with new compounds reduces tubular Rock activation and fibrosis.

    • Anand Reghuvaran
    • Ashwani Kumar
    • Madhav C. Menon
    ResearchOpen Access
    Nature Communications
    Volume: 17, P: 1-21
  • Therapeutic gene editing in vivo is an ongoing challenge. Here, authors demonstrate Cas9 nickase guided DNA ligation as a nonviral method for installing permanent genomic corrections with favorable on target edit profiles in model animal cell types and adult mice.

    • Angela X. Nan
    • Michael Chickering
    • Jenny Xie
    ResearchOpen Access
    Nature Communications
    Volume: 17, P: 1-13
  • In this study, authors employ fragment-based lead discovery to identify WRN inhibitors. The fragment hits reveal an additional allosteric pocket and uncover a previously uncharacterized structural conformation of the WRN helicase domain with unique orientations of the ATPase domains

    • Rachel L. Palte
    • Mihir Mandal
    • Daniel F. Wyss
    ResearchOpen Access
    Nature Communications
    Volume: 17, P: 1-17
  • The variability in clinical outcomes of SARS-CoV-2 infection is partly due to deficiencies in production or response to type I interferons (IFN). Here, the authors describe a FIP200-dependent lysosomal degradation pathway, independent of canonical autophagy and type I IFN, that restricts SARS-CoV-2 replication, offering insights into critical COVID-19 pneumonia mechanisms.

    • Lili Hu
    • Renee M. van der Sluis
    • Trine H. Mogensen
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-23